RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 TUFT1Q9NNX1 390 aa12.68□□□□□ -0.38
FOXN3-212ENST00000556541 PAK6Q9NQU5 681 aaPredicted RBP12.68□□□□□ -0.38
FOXN3-212ENST00000556541 DDX20Q9UHI6 824 aaKnown RBP12.68□□□□□ -0.38
FOXN3-212ENST00000556541 PCDHA7Q9UN72 937 aa12.68□□□□□ -0.38
FOXN3-212ENST00000556541 PCDHA10Q9Y5I2 948 aa12.68□□□□□ -0.38
FOXN3-212ENST00000556541 EMSYQ7Z589 1322 aa12.67□□□□□ -0.38
FOXN3-212ENST00000556541 KDM3AQ9Y4C1 1321 aa12.67□□□□□ -0.38
FOXN3-212ENST00000556541 VWA3AA6NCI4 1184 aa12.67□□□□□ -0.38
FOXN3-212ENST00000556541 ADCY6O43306 1168 aa12.67□□□□□ -0.38
FOXN3-212ENST00000556541 PPFIA4O75335 1185 aa12.67□□□□□ -0.38
FOXN3-212ENST00000556541 LGR5O75473 907 aa12.67□□□□□ -0.38
FOXN3-212ENST00000556541 ECM2O94769 699 aaPredicted RBP12.67□□□□□ -0.38
FOXN3-212ENST00000556541 CCNE2O96020 404 aa12.67□□□□□ -0.38
FOXN3-212ENST00000556541 RARBP10826 455 aa12.67□□□□□ -0.38
FOXN3-212ENST00000556541 CMA1P23946 247 aa12.67□□□□□ -0.38
FOXN3-212ENST00000556541 RPA1P27694 616 aa12.67□□□□□ -0.38
FOXN3-212ENST00000556541 MARCKSP29966 332 aaPredicted RBP12.67□□□□□ -0.38
FOXN3-212ENST00000556541 ME1P48163 572 aa12.67□□□□□ -0.38
FOXN3-212ENST00000556541 SLC26A2P50443 739 aa12.67□□□□□ -0.38
FOXN3-212ENST00000556541 ACTR2P61160 394 aa12.67□□□□□ -0.38
FOXN3-212ENST00000556541 CEBPZQ03701 1054 aaKnown RBP12.67□□□□□ -0.38
FOXN3-212ENST00000556541 LY6KQ17RY6 165 aa12.67□□□□□ -0.38
FOXN3-212ENST00000556541 BRDTQ58F21 947 aaPredicted RBP12.67□□□□□ -0.38
FOXN3-212ENST00000556541 PRAMEF19Q5SWL8 479 aa12.67□□□□□ -0.38
FOXN3-212ENST00000556541 RESP18Q5W5W9 173 aa12.67□□□□□ -0.38
FOXN3-212ENST00000556541 ABHD15Q6UXT9 468 aa12.67□□□□□ -0.38
FOXN3-212ENST00000556541 CYFIP1Q7L576 1253 aa12.67□□□□□ -0.38
FOXN3-212ENST00000556541 ERMNQ8TAM6 284 aa12.67□□□□□ -0.38
FOXN3-212ENST00000556541 SEPT1Q8WYJ6 367 aa12.67□□□□□ -0.38
FOXN3-212ENST00000556541 ZNF333Q96JL9 665 aa12.67□□□□□ -0.38
FOXN3-212ENST00000556541 ZFP91Q96JP5 570 aaPredicted RBP12.67□□□□□ -0.38
FOXN3-212ENST00000556541 GPR20Q99678 358 aa12.67□□□□□ -0.38
FOXN3-212ENST00000556541 HSD17B14Q9BPX1 270 aa12.67□□□□□ -0.38
FOXN3-212ENST00000556541 MLXIPQ9HAP2 919 aa12.67□□□□□ -0.38
FOXN3-212ENST00000556541 LRWD1Q9UFC0 647 aa12.67□□□□□ -0.38
FOXN3-212ENST00000556541 SCN10AQ9Y5Y9 1956 aa12.67□□□□□ -0.38
FOXN3-212ENST00000556541 IGSF9BQ9UPX0 1349 aa12.66□□□□□ -0.38
FOXN3-212ENST00000556541 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.66□□□□□ -0.38
FOXN3-212ENST00000556541 P4HBP07237 508 aaKnown RBP12.66□□□□□ -0.38
FOXN3-212ENST00000556541 PSAPP07602 524 aa12.66□□□□□ -0.38
FOXN3-212ENST00000556541 SUPT20HL2P0C7V6 817 aa12.66□□□□□ -0.38
FOXN3-212ENST00000556541 XRCC6P12956 609 aaKnown RBP eCLIP12.66□□□□□ -0.38
FOXN3-212ENST00000556541 TECP42680 631 aa12.66□□□□□ -0.38
FOXN3-212ENST00000556541 CPT1AP50416 773 aa12.66□□□□□ -0.38
FOXN3-212ENST00000556541 UBE2HP62256 183 aa12.66□□□□□ -0.38
FOXN3-212ENST00000556541 TRIM32Q13049 653 aa12.66□□□□□ -0.38
FOXN3-212ENST00000556541 FOXD4L6Q3SYB3 417 aaPredicted RBP12.66□□□□□ -0.38
FOXN3-212ENST00000556541 MIS18BP1Q6P0N0 1132 aa12.66□□□□□ -0.38
FOXN3-212ENST00000556541 FOXD4L3Q6VB84 417 aaPredicted RBP12.66□□□□□ -0.38
FOXN3-212ENST00000556541 MIER3Q7Z3K6 550 aa12.66□□□□□ -0.38
FOXN3-212ENST00000556541 TLK2Q86UE8 772 aa12.66□□□□□ -0.38
FOXN3-212ENST00000556541 SPATA33Q96N06 139 aa12.66□□□□□ -0.38
FOXN3-212ENST00000556541 TSEN34Q9BSV6 310 aaKnown RBP12.66□□□□□ -0.38
FOXN3-212ENST00000556541 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.66□□□□□ -0.38
FOXN3-212ENST00000556541 NT5C3AQ9H0P0 336 aa12.66□□□□□ -0.38
FOXN3-212ENST00000556541 CSRNP2Q9H175 543 aa12.66□□□□□ -0.38
FOXN3-212ENST00000556541 SPC25Q9HBM1 224 aa12.66□□□□□ -0.38
FOXN3-212ENST00000556541 DISC1Q9NRI5 854 aa12.66□□□□□ -0.38
FOXN3-212ENST00000556541 PPME1Q9Y570 386 aa12.66□□□□□ -0.38
FOXN3-212ENST00000556541 HTTP42858 3142 aa12.66□□□□□ -0.38
FOXN3-212ENST00000556541 ARID2Q68CP9 1835 aa12.65□□□□□ -0.38
FOXN3-212ENST00000556541 TNRC18O15417 2968 aaPredicted RBP12.65□□□□□ -0.38
FOXN3-212ENST00000556541 GSTTP1A0A1W2PQM5 241 aa12.65□□□□□ -0.38
FOXN3-212ENST00000556541 POTEFA5A3E0 1075 aa12.65□□□□□ -0.38
FOXN3-212ENST00000556541 POTEMA6NI47 508 aa12.65□□□□□ -0.38
FOXN3-212ENST00000556541 DDX11L8A8MPP1 907 aa12.65□□□□□ -0.38
FOXN3-212ENST00000556541 CTAGE5O15320 804 aa12.65□□□□□ -0.38
FOXN3-212ENST00000556541 ADAMTS4O75173 837 aa12.65□□□□□ -0.38
FOXN3-212ENST00000556541 MMP3P08254 477 aa12.65□□□□□ -0.38
FOXN3-212ENST00000556541 CCND3P30281 292 aaPredicted RBP12.65□□□□□ -0.38
FOXN3-212ENST00000556541 TXLNAP40222 546 aa12.65□□□□□ -0.38
FOXN3-212ENST00000556541 RGS19P49795 217 aa12.65□□□□□ -0.38
FOXN3-212ENST00000556541 DGKDQ16760 1214 aa12.65□□□□□ -0.38
FOXN3-212ENST00000556541 HSDL1Q3SXM5 330 aa12.65□□□□□ -0.38
FOXN3-212ENST00000556541 KRT79Q5XKE5 535 aa12.65□□□□□ -0.38
FOXN3-212ENST00000556541 LHX8Q68G74 356 aa12.65□□□□□ -0.38
FOXN3-212ENST00000556541 SHC4Q6S5L8 630 aa12.65□□□□□ -0.38
FOXN3-212ENST00000556541 PLPPR4Q7Z2D5 763 aa12.65□□□□□ -0.38
FOXN3-212ENST00000556541 C4orf19Q8IY42 314 aa12.65□□□□□ -0.38
FOXN3-212ENST00000556541 KLHDC9Q8NEP7 349 aa12.65□□□□□ -0.38
FOXN3-212ENST00000556541 OR6J1Q8NGC5 347 aa12.65□□□□□ -0.38
FOXN3-212ENST00000556541 ATP6V0A1Q93050 837 aa12.65□□□□□ -0.38
FOXN3-212ENST00000556541 MMTAG2Q9BU76 263 aaKnown RBP12.65□□□□□ -0.38
FOXN3-212ENST00000556541 SEZ6LQ9BYH1 1024 aa12.65□□□□□ -0.38
FOXN3-212ENST00000556541 AP5M1Q9H0R1 490 aa12.65□□□□□ -0.38
FOXN3-212ENST00000556541 USP25Q9UHP3 1055 aa12.65□□□□□ -0.38
FOXN3-212ENST00000556541 HPSEQ9Y251 543 aa12.65□□□□□ -0.38
FOXN3-212ENST00000556541 MAFBQ9Y5Q3 323 aaPredicted RBP12.65□□□□□ -0.38
FOXN3-212ENST00000556541 SYNRGQ9UMZ2 1314 aa12.64□□□□□ -0.39
FOXN3-212ENST00000556541 EML1O00423 815 aa12.64□□□□□ -0.39
FOXN3-212ENST00000556541 NOP56O00567 594 aaKnown RBP12.64□□□□□ -0.39
FOXN3-212ENST00000556541 ZEB2O60315 1214 aa12.64□□□□□ -0.39
FOXN3-212ENST00000556541 UBA7P41226 1012 aa12.64□□□□□ -0.39
FOXN3-212ENST00000556541 QARSP47897 775 aaKnown RBP12.64□□□□□ -0.39
FOXN3-212ENST00000556541 PSMC5P62195 406 aa12.64□□□□□ -0.39
FOXN3-212ENST00000556541 GRIN1Q05586 938 aa12.64□□□□□ -0.39
FOXN3-212ENST00000556541 TMEM119Q4V9L6 283 aa12.64□□□□□ -0.39
FOXN3-212ENST00000556541 FAM160B1Q5W0V3 765 aa12.64□□□□□ -0.39
FOXN3-212ENST00000556541 CCSAPQ6IQ19 270 aaPredicted RBP12.64□□□□□ -0.39
FOXN3-212ENST00000556541 PCSK9Q8NBP7 692 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms