RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 SENP7Q9BQF6 1050 aa11.02□□□□□ -0.65
SRP54-210ENST00000556380 MXRA8Q9BRK3 442 aa11.02□□□□□ -0.65
SRP54-210ENST00000556380 EHMT1Q9H9B1 1298 aa11.02□□□□□ -0.65
SRP54-210ENST00000556380 KIAA1468Q9P260 1216 aa11.02□□□□□ -0.65
SRP54-210ENST00000556380 IGLV3-22A0A075B6J6 115 aa11.01□□□□□ -0.65
SRP54-210ENST00000556380 FAM86B1E9PN63 330 aa11.01□□□□□ -0.65
SRP54-210ENST00000556380 ZEB2O60315 1214 aa11.01□□□□□ -0.65
SRP54-210ENST00000556380 KPNA6O60684 536 aa11.01□□□□□ -0.65
SRP54-210ENST00000556380 CABYRO75952 493 aa11.01□□□□□ -0.65
SRP54-210ENST00000556380 GGPS1O95749 300 aa11.01□□□□□ -0.65
SRP54-210ENST00000556380 MMP3P08254 477 aa11.01□□□□□ -0.65
SRP54-210ENST00000556380 FAM86B2P0C5J1 330 aa11.01□□□□□ -0.65
SRP54-210ENST00000556380 CIITAP33076 1130 aa11.01□□□□□ -0.65
SRP54-210ENST00000556380 RTP1P59025 263 aa11.01□□□□□ -0.65
SRP54-210ENST00000556380 NBR1Q14596 966 aa11.01□□□□□ -0.65
SRP54-210ENST00000556380 HSDL1Q3SXM5 330 aa11.01□□□□□ -0.65
SRP54-210ENST00000556380 NIPA1Q7RTP0 329 aa11.01□□□□□ -0.65
SRP54-210ENST00000556380 ANKRD33Q7Z3H0 272 aa11.01□□□□□ -0.65
SRP54-210ENST00000556380 NLRX1Q86UT6 975 aa11.01□□□□□ -0.65
SRP54-210ENST00000556380 DHX37Q8IY37 1157 aaKnown RBP11.01□□□□□ -0.65
SRP54-210ENST00000556380 PPTC7Q8NI37 304 aa11.01□□□□□ -0.65
SRP54-210ENST00000556380 WASF1Q92558 559 aa11.01□□□□□ -0.65
SRP54-210ENST00000556380 KAT2BQ92831 832 aa11.01□□□□□ -0.65
SRP54-210ENST00000556380 TMX3Q96JJ7 454 aa11.01□□□□□ -0.65
SRP54-210ENST00000556380 GLT1D1Q96MS3 346 aa11.01□□□□□ -0.65
SRP54-210ENST00000556380 ALG1Q9BT22 464 aa11.01□□□□□ -0.65
SRP54-210ENST00000556380 STARD7Q9NQZ5 370 aa11.01□□□□□ -0.65
SRP54-210ENST00000556380 TELO2Q9Y4R8 837 aa11.01□□□□□ -0.65
SRP54-210ENST00000556380 KIAA1217Q5T5P2 1943 aa11.01□□□□□ -0.65
SRP54-210ENST00000556380 ARVCFO00192 962 aa11□□□□□ -0.65
SRP54-210ENST00000556380 PPFIA4O75335 1185 aa11□□□□□ -0.65
SRP54-210ENST00000556380 ARP10275 920 aa11□□□□□ -0.65
SRP54-210ENST00000556380 MCM2P49736 904 aa11□□□□□ -0.65
SRP54-210ENST00000556380 USP11P51784 963 aa11□□□□□ -0.65
SRP54-210ENST00000556380 TLE2Q04725 743 aa11□□□□□ -0.65
SRP54-210ENST00000556380 MTMR1Q13613 665 aa11□□□□□ -0.65
SRP54-210ENST00000556380 NEDD9Q14511 834 aa11□□□□□ -0.65
SRP54-210ENST00000556380 TRIM60Q495X7 471 aa11□□□□□ -0.65
SRP54-210ENST00000556380 METTL7BQ6UX53 244 aa11□□□□□ -0.65
SRP54-210ENST00000556380 CYFIP1Q7L576 1253 aa11□□□□□ -0.65
SRP54-210ENST00000556380 TNFRSF25Q93038 417 aa11□□□□□ -0.65
SRP54-210ENST00000556380 LENG9Q96B70 501 aa11□□□□□ -0.65
SRP54-210ENST00000556380 CDHR1Q96JP9 859 aa11□□□□□ -0.65
SRP54-210ENST00000556380 SPATA33Q96N06 139 aa11□□□□□ -0.65
SRP54-210ENST00000556380 TOX2Q96NM4 488 aa11□□□□□ -0.65
SRP54-210ENST00000556380 MTG1Q9BT17 334 aaPredicted RBP11□□□□□ -0.65
SRP54-210ENST00000556380 KCNH7Q9NS40 1196 aa11□□□□□ -0.65
SRP54-210ENST00000556380 POLR3EQ9NVU0 708 aa11□□□□□ -0.65
SRP54-210ENST00000556380 CYP3A7-CYP3A51PA0A087WV96 503 aa10.99□□□□□ -0.65
SRP54-210ENST00000556380 A0A0U1RQG5 324 aaPredicted RBP10.99□□□□□ -0.65
SRP54-210ENST00000556380 H0YGN5 161 aa10.99□□□□□ -0.65
SRP54-210ENST00000556380 DHX15O43143 795 aaKnown RBP10.99□□□□□ -0.65
SRP54-210ENST00000556380 SORBS3O60504 671 aa10.99□□□□□ -0.65
SRP54-210ENST00000556380 MYL3P08590 195 aa10.99□□□□□ -0.65
SRP54-210ENST00000556380 CYP3A7P24462 503 aa10.99□□□□□ -0.65
SRP54-210ENST00000556380 ITGB3BPQ13352 177 aaPredicted RBP10.99□□□□□ -0.65
SRP54-210ENST00000556380 DGKDQ16760 1214 aa10.99□□□□□ -0.65
SRP54-210ENST00000556380 BRDTQ58F21 947 aaPredicted RBP10.99□□□□□ -0.65
SRP54-210ENST00000556380 KRT40Q6A162 431 aa10.99□□□□□ -0.65
SRP54-210ENST00000556380 MBOAT7Q96N66 472 aa10.99□□□□□ -0.65
SRP54-210ENST00000556380 GPR20Q99678 358 aa10.99□□□□□ -0.65
SRP54-210ENST00000556380 SEZ6LQ9BYH1 1024 aa10.99□□□□□ -0.65
SRP54-210ENST00000556380 MLXIPQ9HAP2 919 aa10.99□□□□□ -0.65
SRP54-210ENST00000556380 AGO4Q9HCK5 861 aaKnown RBP10.99□□□□□ -0.65
SRP54-210ENST00000556380 NR2E3Q9Y5X4 410 aa10.99□□□□□ -0.65
SRP54-210ENST00000556380 ALPK3Q96L96 1907 aa10.99□□□□□ -0.65
SRP54-210ENST00000556380 HAS3O00219 553 aa10.98□□□□□ -0.65
SRP54-210ENST00000556380 MMP1P03956 469 aa10.98□□□□□ -0.65
SRP54-210ENST00000556380 XBP1P17861 261 aa10.98□□□□□ -0.65
SRP54-210ENST00000556380 PSMC6P62333 389 aa10.98□□□□□ -0.65
SRP54-210ENST00000556380 HMGN5P82970 282 aaKnown RBP10.98□□□□□ -0.65
SRP54-210ENST00000556380 FAAP100Q0VG06 881 aa10.98□□□□□ -0.65
SRP54-210ENST00000556380 ITGA7Q13683 1181 aa10.98□□□□□ -0.65
SRP54-210ENST00000556380 NBPF20Q3BBV1 942 aa10.98□□□□□ -0.65
SRP54-210ENST00000556380 EARS2Q5JPH6 523 aaKnown RBP10.98□□□□□ -0.65
SRP54-210ENST00000556380 PRPF38BQ5VTL8 546 aaKnown RBP10.98□□□□□ -0.65
SRP54-210ENST00000556380 KRT25Q7Z3Z0 450 aa10.98□□□□□ -0.65
SRP54-210ENST00000556380 FAM126BQ8IXS8 530 aa10.98□□□□□ -0.65
SRP54-210ENST00000556380 C7orf61Q8IZ16 206 aa10.98□□□□□ -0.65
SRP54-210ENST00000556380 GIMAP8Q8ND71 665 aaPredicted RBP10.98□□□□□ -0.65
SRP54-210ENST00000556380 FBXO18Q8NFZ0 1043 aa10.98□□□□□ -0.65
SRP54-210ENST00000556380 TBCKQ8TEA7 893 aa10.98□□□□□ -0.65
SRP54-210ENST00000556380 VTI1AQ96AJ9 217 aa10.98□□□□□ -0.65
SRP54-210ENST00000556380 C16orf70Q9BSU1 422 aa10.98□□□□□ -0.65
SRP54-210ENST00000556380 ATP11BQ9Y2G3 1177 aa10.98□□□□□ -0.65
SRP54-210ENST00000556380 ARIH1Q9Y4X5 557 aaPredicted RBP10.98□□□□□ -0.65
SRP54-210ENST00000556380 NFASCO94856 1347 aa10.98□□□□□ -0.65
SRP54-210ENST00000556380 SCN10AQ9Y5Y9 1956 aa10.97□□□□□ -0.65
SRP54-210ENST00000556380 GSTTP1A0A1W2PQM5 241 aa10.97□□□□□ -0.65
SRP54-210ENST00000556380 TRIM43BA6NCK2 446 aa10.97□□□□□ -0.65
SRP54-210ENST00000556380 BTBD18B2RXH4 712 aa10.97□□□□□ -0.65
SRP54-210ENST00000556380 KIAA0355O15063 1070 aa10.97□□□□□ -0.65
SRP54-210ENST00000556380 MAP3K7O43318 606 aa10.97□□□□□ -0.65
SRP54-210ENST00000556380 PQBP1O60828 265 aaKnown RBP10.97□□□□□ -0.65
SRP54-210ENST00000556380 F2P00734 622 aa10.97□□□□□ -0.65
SRP54-210ENST00000556380 CD4P01730 458 aa10.97□□□□□ -0.65
SRP54-210ENST00000556380 ZNF76P36508 570 aa10.97□□□□□ -0.65
SRP54-210ENST00000556380 NR5A1Q13285 461 aa10.97□□□□□ -0.65
SRP54-210ENST00000556380 CUL4AQ13619 759 aa10.97□□□□□ -0.65
SRP54-210ENST00000556380 TSR1Q2NL82 804 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms