RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 GSNP06396 782 aa5.21□□□□□ -1.58
ATXN3-240ENST00000556339 NME1P15531 152 aaKnown RBP5.21□□□□□ -1.58
ATXN3-240ENST00000556339 RFC4P35249 363 aa5.21□□□□□ -1.58
ATXN3-240ENST00000556339 MTHFSP49914 203 aa5.21□□□□□ -1.58
ATXN3-240ENST00000556339 C1QTNF8P60827 252 aa5.21□□□□□ -1.58
ATXN3-240ENST00000556339 PLP2Q04941 152 aa5.21□□□□□ -1.58
ATXN3-240ENST00000556339 CLCQ05315 142 aa5.21□□□□□ -1.58
ATXN3-240ENST00000556339 AUHQ13825 339 aaKnown RBP5.21□□□□□ -1.58
ATXN3-240ENST00000556339 EIF4A2Q14240 407 aaKnown RBP5.21□□□□□ -1.58
ATXN3-240ENST00000556339 NOL9Q5SY16 702 aaKnown RBP5.21□□□□□ -1.58
ATXN3-240ENST00000556339 HLA-DQA1Q5Y7H0 255 aa5.21□□□□□ -1.58
ATXN3-240ENST00000556339 ZNF530Q6P9A1 599 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-240ENST00000556339 TMEM192Q8IY95 271 aa5.21□□□□□ -1.58
ATXN3-240ENST00000556339 RGS22Q8NE09 1264 aa5.21□□□□□ -1.58
ATXN3-240ENST00000556339 NKD1Q969G9 470 aa5.21□□□□□ -1.58
ATXN3-240ENST00000556339 DHRS1Q96LJ7 313 aa5.21□□□□□ -1.58
ATXN3-240ENST00000556339 JMJD8Q96S16 334 aa5.21□□□□□ -1.58
ATXN3-240ENST00000556339 BDH2Q9BUT1 245 aa5.21□□□□□ -1.58
ATXN3-240ENST00000556339 ANTXR1Q9H6X2 564 aa5.21□□□□□ -1.58
ATXN3-240ENST00000556339 ACSL6Q9UKU0 697 aa5.21□□□□□ -1.58
ATXN3-240ENST00000556339 PCDHA5Q9Y5H7 936 aa5.21□□□□□ -1.58
ATXN3-240ENST00000556339 CD2APQ9Y5K6 639 aa5.21□□□□□ -1.58
ATXN3-240ENST00000556339 MEGF6O75095 1541 aa5.21□□□□□ -1.58
ATXN3-240ENST00000556339 MYOM1P52179 1685 aa5.21□□□□□ -1.58
ATXN3-240ENST00000556339 FAM208AQ9UK61 1670 aaKnown RBP5.21□□□□□ -1.58
ATXN3-240ENST00000556339 KIF24Q5T7B8 1368 aa5.2□□□□□ -1.58
ATXN3-240ENST00000556339 ERVV-2B6SEH9 535 aa5.2□□□□□ -1.58
ATXN3-240ENST00000556339 ADRB1P08588 477 aa5.2□□□□□ -1.58
ATXN3-240ENST00000556339 PDIA4P13667 645 aaKnown RBP5.2□□□□□ -1.58
ATXN3-240ENST00000556339 PHKG2P15735 406 aa5.2□□□□□ -1.58
ATXN3-240ENST00000556339 ERCC3P19447 782 aa5.2□□□□□ -1.58
ATXN3-240ENST00000556339 CTSKP43235 329 aa5.2□□□□□ -1.58
ATXN3-240ENST00000556339 KCNC1P48547 511 aa5.2□□□□□ -1.58
ATXN3-240ENST00000556339 TARBP2Q15633 366 aaKnown RBP5.2□□□□□ -1.58
ATXN3-240ENST00000556339 AMOTQ4VCS5 1084 aa5.2□□□□□ -1.58
ATXN3-240ENST00000556339 BICRALQ6AI39 1079 aa5.2□□□□□ -1.58
ATXN3-240ENST00000556339 REXO1Q8N1G1 1221 aaKnown RBP5.2□□□□□ -1.58
ATXN3-240ENST00000556339 ZNF526Q8TF50 670 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-240ENST00000556339 YTHDC1Q96MU7 727 aaKnown RBP5.2□□□□□ -1.58
ATXN3-240ENST00000556339 KCNQ5Q9NR82 932 aa5.2□□□□□ -1.58
ATXN3-240ENST00000556339 USP40Q9NVE5 1235 aa5.2□□□□□ -1.58
ATXN3-240ENST00000556339 USP54Q70EL1 1684 aa5.19□□□□□ -1.58
ATXN3-240ENST00000556339 KIF20BQ96Q89 1820 aa5.19□□□□□ -1.58
ATXN3-240ENST00000556339 MMP10P09238 476 aa5.19□□□□□ -1.58
ATXN3-240ENST00000556339 MAPKAPK2P49137 400 aa5.19□□□□□ -1.58
ATXN3-240ENST00000556339 SULT6B1Q6IMI4 303 aa5.19□□□□□ -1.58
ATXN3-240ENST00000556339 USP48Q86UV5 1035 aa5.19□□□□□ -1.58
ATXN3-240ENST00000556339 C7orf61Q8IZ16 206 aa5.19□□□□□ -1.58
ATXN3-240ENST00000556339 PRR13Q9NZ81 148 aa5.19□□□□□ -1.58
ATXN3-240ENST00000556339 DOT1LQ8TEK3 1739 aa5.19□□□□□ -1.58
ATXN3-240ENST00000556339 IGSF1Q8N6C5 1336 aa5.19□□□□□ -1.58
ATXN3-240ENST00000556339 ITGB4P16144 1822 aa5.18□□□□□ -1.58
ATXN3-240ENST00000556339 NSD2O96028 1365 aa5.18□□□□□ -1.58
ATXN3-240ENST00000556339 MAP3K5Q99683 1374 aa5.18□□□□□ -1.58
ATXN3-240ENST00000556339 A0A0G2JLW4 131 aa5.18□□□□□ -1.58
ATXN3-240ENST00000556339 TNFRSF10CO14798 259 aa5.18□□□□□ -1.58
ATXN3-240ENST00000556339 ITPK1Q13572 414 aa5.18□□□□□ -1.58
ATXN3-240ENST00000556339 CBX2Q14781 532 aaPredicted RBP5.18□□□□□ -1.58
ATXN3-240ENST00000556339 CCDC27Q2M243 656 aa5.18□□□□□ -1.58
ATXN3-240ENST00000556339 SPATS1Q496A3 300 aa5.18□□□□□ -1.58
ATXN3-240ENST00000556339 CC2D1BQ5T0F9 858 aaKnown RBP5.18□□□□□ -1.58
ATXN3-240ENST00000556339 TDRD10Q5VZ19 366 aaKnown RBP5.18□□□□□ -1.58
ATXN3-240ENST00000556339 CYP2R1Q6VVX0 501 aa5.18□□□□□ -1.58
ATXN3-240ENST00000556339 FRMD5Q7Z6J6 570 aa5.18□□□□□ -1.58
ATXN3-240ENST00000556339 NPM2Q86SE8 214 aaKnown RBP5.18□□□□□ -1.58
ATXN3-240ENST00000556339 LSRQ86X29 649 aaPredicted RBP5.18□□□□□ -1.58
ATXN3-240ENST00000556339 SLC9A7Q96T83 725 aa5.18□□□□□ -1.58
ATXN3-240ENST00000556339 SUCOQ9UBS9 1254 aaKnown RBP5.18□□□□□ -1.58
ATXN3-240ENST00000556339 SUSD2Q9UGT4 822 aa5.18□□□□□ -1.58
ATXN3-240ENST00000556339 ADAMTS1Q9UHI8 967 aa5.18□□□□□ -1.58
ATXN3-240ENST00000556339 MEIS3P2A8K0S8 358 aa5.17□□□□□ -1.58
ATXN3-240ENST00000556339 ANP32CO43423 234 aa5.17□□□□□ -1.58
ATXN3-240ENST00000556339 RPS6KA4O75676 772 aa5.17□□□□□ -1.58
ATXN3-240ENST00000556339 CYBBP04839 570 aa5.17□□□□□ -1.58
ATXN3-240ENST00000556339 HMOX1P09601 288 aa5.17□□□□□ -1.58
ATXN3-240ENST00000556339 TACR1P25103 407 aa5.17□□□□□ -1.58
ATXN3-240ENST00000556339 NOP2P46087 812 aaKnown RBP5.17□□□□□ -1.58
ATXN3-240ENST00000556339 MVKQ03426 396 aa5.17□□□□□ -1.58
ATXN3-240ENST00000556339 RTP2Q5QGT7 225 aa5.17□□□□□ -1.58
ATXN3-240ENST00000556339 UBXN11Q5T124 520 aa5.17□□□□□ -1.58
ATXN3-240ENST00000556339 FBXW10Q5XX13 1052 aa5.17□□□□□ -1.58
ATXN3-240ENST00000556339 PAQR3Q6TCH7 311 aa5.17□□□□□ -1.58
ATXN3-240ENST00000556339 BRF1Q92994 677 aa5.17□□□□□ -1.58
ATXN3-240ENST00000556339 FAM86C1Q9NVL1 165 aa5.17□□□□□ -1.58
ATXN3-240ENST00000556339 PMF1-BGLAPU3KQ54 211 aa5.17□□□□□ -1.58
ATXN3-240ENST00000556339 LY75O60449 1722 aa5.17□□□□□ -1.58
ATXN3-240ENST00000556339 TUBGCP6Q96RT7 1819 aa5.16□□□□□ -1.58
ATXN3-240ENST00000556339 F8W031 263 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-240ENST00000556339 H0Y8X5 98 aa5.16□□□□□ -1.58
ATXN3-240ENST00000556339 U2SURPO15042 1029 aaKnown RBP5.16□□□□□ -1.58
ATXN3-240ENST00000556339 NPHP1O15259 732 aa5.16□□□□□ -1.58
ATXN3-240ENST00000556339 DIAPH1O60610 1272 aaKnown RBP5.16□□□□□ -1.58
ATXN3-240ENST00000556339 TBC1D8O95759 1140 aa5.16□□□□□ -1.58
ATXN3-240ENST00000556339 DBHP09172 617 aa5.16□□□□□ -1.58
ATXN3-240ENST00000556339 MSL3P1P0C860 447 aa5.16□□□□□ -1.58
ATXN3-240ENST00000556339 CRKLP46109 303 aaKnown RBP5.16□□□□□ -1.58
ATXN3-240ENST00000556339 SLURP1P55000 103 aa5.16□□□□□ -1.58
ATXN3-240ENST00000556339 TGFB2P61812 414 aa5.16□□□□□ -1.58
ATXN3-240ENST00000556339 DCAF15Q66K64 600 aa5.16□□□□□ -1.58
ATXN3-240ENST00000556339 CABP7Q86V35 215 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms