RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 ATL3Q6DD88 541 aa12.94□□□□□ -0.34
GABRB3-210ENST00000556166 ZNF746Q6NUN9 644 aaPredicted RBP12.94□□□□□ -0.34
GABRB3-210ENST00000556166 SEPT1Q8WYJ6 367 aa12.94□□□□□ -0.34
GABRB3-210ENST00000556166 ABHD8Q96I13 439 aa12.94□□□□□ -0.34
GABRB3-210ENST00000556166 FBXO2Q9UK22 296 aaPredicted RBP12.94□□□□□ -0.34
GABRB3-210ENST00000556166 IGKV6D-21A0A0A0MT36 114 aa12.93□□□□□ -0.34
GABRB3-210ENST00000556166 LAD1O00515 517 aa12.93□□□□□ -0.34
GABRB3-210ENST00000556166 PPFIA4O75335 1185 aa12.93□□□□□ -0.34
GABRB3-210ENST00000556166 MYCNP04198 464 aaPredicted RBP12.93□□□□□ -0.34
GABRB3-210ENST00000556166 CST5P28325 142 aaPredicted RBP12.93□□□□□ -0.34
GABRB3-210ENST00000556166 FXR2P51116 673 aaKnown RBP eCLIP12.93□□□□□ -0.34
GABRB3-210ENST00000556166 KRT76Q01546 638 aa12.93□□□□□ -0.34
GABRB3-210ENST00000556166 ARL6IP4Q66PJ3 421 aaKnown RBP12.93□□□□□ -0.34
GABRB3-210ENST00000556166 KAT2BQ92831 832 aa12.93□□□□□ -0.34
GABRB3-210ENST00000556166 CLIC6Q96NY7 704 aa12.93□□□□□ -0.34
GABRB3-210ENST00000556166 C16orf70Q9BSU1 422 aa12.93□□□□□ -0.34
GABRB3-210ENST00000556166 DISC1Q9NRI5 854 aa12.93□□□□□ -0.34
GABRB3-210ENST00000556166 MORC2Q9Y6X9 1032 aaPredicted RBP12.93□□□□□ -0.34
GABRB3-210ENST00000556166 ELP1O95163 1332 aa12.92□□□□□ -0.34
GABRB3-210ENST00000556166 VWA3AA6NCI4 1184 aa12.92□□□□□ -0.34
GABRB3-210ENST00000556166 POTEMA6NI47 508 aa12.92□□□□□ -0.34
GABRB3-210ENST00000556166 PP2D1A8MPX8 630 aa12.92□□□□□ -0.34
GABRB3-210ENST00000556166 SPTLC2O15270 562 aa12.92□□□□□ -0.34
GABRB3-210ENST00000556166 LGR5O75473 907 aa12.92□□□□□ -0.34
GABRB3-210ENST00000556166 YEATS4O95619 227 aa12.92□□□□□ -0.34
GABRB3-210ENST00000556166 BMP15O95972 392 aa12.92□□□□□ -0.34
GABRB3-210ENST00000556166 SUPT20HL2P0C7V6 817 aa12.92□□□□□ -0.34
GABRB3-210ENST00000556166 EN2P19622 333 aaPredicted RBP12.92□□□□□ -0.34
GABRB3-210ENST00000556166 CDC25AP30304 524 aa12.92□□□□□ -0.34
GABRB3-210ENST00000556166 TCF7P36402 384 aaPredicted RBP12.92□□□□□ -0.34
GABRB3-210ENST00000556166 PDIA5Q14554 519 aa12.92□□□□□ -0.34
GABRB3-210ENST00000556166 STK38Q15208 465 aa12.92□□□□□ -0.34
GABRB3-210ENST00000556166 AXDND1Q5T1B0 1012 aaPredicted RBP12.92□□□□□ -0.34
GABRB3-210ENST00000556166 NCAPH2Q6IBW4 605 aa12.92□□□□□ -0.34
GABRB3-210ENST00000556166 SWSAP1Q6NVH7 229 aa12.92□□□□□ -0.34
GABRB3-210ENST00000556166 DTHD1Q6ZMT9 781 aa12.92□□□□□ -0.34
GABRB3-210ENST00000556166 TRIM50Q86XT4 487 aa12.92□□□□□ -0.34
GABRB3-210ENST00000556166 IGSF22Q8N9C0 903 aa12.92□□□□□ -0.34
GABRB3-210ENST00000556166 LEO1Q8WVC0 666 aaPredicted RBP12.92□□□□□ -0.34
GABRB3-210ENST00000556166 MMTAG2Q9BU76 263 aaKnown RBP12.92□□□□□ -0.34
GABRB3-210ENST00000556166 TMEM106CQ9BVX2 250 aa12.92□□□□□ -0.34
GABRB3-210ENST00000556166 GDPD2Q9HCC8 539 aa12.92□□□□□ -0.34
GABRB3-210ENST00000556166 CFAP45Q9UL16 551 aa12.92□□□□□ -0.34
GABRB3-210ENST00000556166 CEP131Q9UPN4 1083 aa12.92□□□□□ -0.34
GABRB3-210ENST00000556166 PCDHA10Q9Y5I2 948 aa12.92□□□□□ -0.34
GABRB3-210ENST00000556166 ATP6V1DQ9Y5K8 247 aa12.92□□□□□ -0.34
GABRB3-210ENST00000556166 SRPRBQ9Y5M8 271 aaKnown RBP12.92□□□□□ -0.34
GABRB3-210ENST00000556166 WDR64B1ANS9 1081 aa12.91□□□□□ -0.34
GABRB3-210ENST00000556166 NOP56O00567 594 aaKnown RBP12.91□□□□□ -0.34
GABRB3-210ENST00000556166 ASGR1P07306 291 aa12.91□□□□□ -0.34
GABRB3-210ENST00000556166 MYL3P08590 195 aa12.91□□□□□ -0.34
GABRB3-210ENST00000556166 ZNF286BP0CG31 522 aa12.91□□□□□ -0.34
GABRB3-210ENST00000556166 NCLP19338 710 aaKnown RBP12.91□□□□□ -0.34
GABRB3-210ENST00000556166 ATP4AP20648 1035 aa12.91□□□□□ -0.34
GABRB3-210ENST00000556166 CPT1AP50416 773 aa12.91□□□□□ -0.34
GABRB3-210ENST00000556166 ACLYP53396 1101 aa12.91□□□□□ -0.34
GABRB3-210ENST00000556166 KRT85P78386 507 aa12.91□□□□□ -0.34
GABRB3-210ENST00000556166 PURAQ00577 322 aaKnown RBP12.91□□□□□ -0.34
GABRB3-210ENST00000556166 UGCGQ16739 394 aa12.91□□□□□ -0.34
GABRB3-210ENST00000556166 DGKDQ16760 1214 aa12.91□□□□□ -0.34
GABRB3-210ENST00000556166 UTP14CQ5TAP6 766 aaKnown RBP12.91□□□□□ -0.34
GABRB3-210ENST00000556166 CXCL17Q6UXB2 119 aa12.91□□□□□ -0.34
GABRB3-210ENST00000556166 USP49Q70CQ1 688 aa12.91□□□□□ -0.34
GABRB3-210ENST00000556166 MIER3Q7Z3K6 550 aa12.91□□□□□ -0.34
GABRB3-210ENST00000556166 RNF180Q86T96 592 aa12.91□□□□□ -0.34
GABRB3-210ENST00000556166 CCDC60Q8IWA6 550 aaPredicted RBP12.91□□□□□ -0.34
GABRB3-210ENST00000556166 ARRDC4Q8NCT1 418 aa12.91□□□□□ -0.34
GABRB3-210ENST00000556166 DIS3LQ8TF46 1054 aaKnown RBP12.91□□□□□ -0.34
GABRB3-210ENST00000556166 PPP1R13LQ8WUF5 828 aa12.91□□□□□ -0.34
GABRB3-210ENST00000556166 HSD17B14Q9BPX1 270 aa12.91□□□□□ -0.34
GABRB3-210ENST00000556166 SPC25Q9HBM1 224 aa12.91□□□□□ -0.34
GABRB3-210ENST00000556166 RGL1Q9NZL6 768 aa12.91□□□□□ -0.34
GABRB3-210ENST00000556166 WRAP73Q9P2S5 460 aaPredicted RBP12.91□□□□□ -0.34
GABRB3-210ENST00000556166 KIAA0100Q14667 2235 aaKnown RBP12.91□□□□□ -0.34
GABRB3-210ENST00000556166 ZNF862O60290 1169 aa12.9□□□□□ -0.34
GABRB3-210ENST00000556166 SLITRK3O94933 977 aa12.9□□□□□ -0.34
GABRB3-210ENST00000556166 STBD1O95210 358 aa12.9□□□□□ -0.34
GABRB3-210ENST00000556166 LGALS2P05162 132 aa12.9□□□□□ -0.34
GABRB3-210ENST00000556166 SPATA31C1P0DKV0 1188 aa12.9□□□□□ -0.34
GABRB3-210ENST00000556166 JAK3P52333 1124 aa12.9□□□□□ -0.34
GABRB3-210ENST00000556166 EPHA7Q15375 998 aa12.9□□□□□ -0.34
GABRB3-210ENST00000556166 ECM1Q16610 540 aa12.9□□□□□ -0.34
GABRB3-210ENST00000556166 SPECC1Q5M775 1068 aa12.9□□□□□ -0.34
GABRB3-210ENST00000556166 MIS18BP1Q6P0N0 1132 aa12.9□□□□□ -0.34
GABRB3-210ENST00000556166 SMAP1Q8IYB5 467 aaPredicted RBP12.9□□□□□ -0.34
GABRB3-210ENST00000556166 TNS4Q8IZW8 715 aa12.9□□□□□ -0.34
GABRB3-210ENST00000556166 EIF2AK1Q9BQI3 630 aaKnown RBP12.9□□□□□ -0.34
GABRB3-210ENST00000556166 TSEN34Q9BSV6 310 aaKnown RBP12.9□□□□□ -0.34
GABRB3-210ENST00000556166 CSRNP2Q9H175 543 aa12.9□□□□□ -0.34
GABRB3-210ENST00000556166 PCDHA7Q9UN72 937 aa12.9□□□□□ -0.34
GABRB3-210ENST00000556166 PHF24Q9UPV7 400 aa12.9□□□□□ -0.34
GABRB3-210ENST00000556166 SAMM50Q9Y512 469 aa12.9□□□□□ -0.34
GABRB3-210ENST00000556166 GRIN2DO15399 1336 aa12.9□□□□□ -0.34
GABRB3-210ENST00000556166 A0A087WWV3 80 aa12.9□□□□□ -0.35
GABRB3-210ENST00000556166 DNM1LO00429 736 aa12.9□□□□□ -0.35
GABRB3-210ENST00000556166 PPP6R2O75170 966 aa12.9□□□□□ -0.35
GABRB3-210ENST00000556166 MED24O75448 989 aa12.9□□□□□ -0.35
GABRB3-210ENST00000556166 PSAPP07602 524 aa12.9□□□□□ -0.35
GABRB3-210ENST00000556166 SFNP31947 248 aa12.9□□□□□ -0.35
GABRB3-210ENST00000556166 PSMC6P62333 389 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms