RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 MARK3P27448 753 aa17.63■□□□□ 0.41
SNX6-205ENST00000555648 DEFB103AP81534 67 aa17.63■□□□□ 0.41
SNX6-205ENST00000555648 TAP1Q03518 808 aa17.63■□□□□ 0.41
SNX6-205ENST00000555648 PPFIA1Q13136 1202 aa17.63■□□□□ 0.41
SNX6-205ENST00000555648 TJAP1Q5JTD0 557 aa17.63■□□□□ 0.41
SNX6-205ENST00000555648 FAM117BQ6P1L5 589 aa17.63■□□□□ 0.41
SNX6-205ENST00000555648 Q6ZUG5 572 aa17.63■□□□□ 0.41
SNX6-205ENST00000555648 DBF4BQ8NFT6 615 aa17.63■□□□□ 0.41
SNX6-205ENST00000555648 BRF1Q92994 677 aa17.63■□□□□ 0.41
SNX6-205ENST00000555648 RAD9AQ99638 391 aa17.63■□□□□ 0.41
SNX6-205ENST00000555648 MXRA8Q9BRK3 442 aa17.63■□□□□ 0.41
SNX6-205ENST00000555648 ANO3Q9BYT9 981 aa17.63■□□□□ 0.41
SNX6-205ENST00000555648 JPH1Q9HDC5 661 aaPredicted RBP17.63■□□□□ 0.41
SNX6-205ENST00000555648 BARHL2Q9NY43 387 aa17.63■□□□□ 0.41
SNX6-205ENST00000555648 STXBP3O00186 592 aa17.62■□□□□ 0.41
SNX6-205ENST00000555648 GJB5O95377 273 aa17.62■□□□□ 0.41
SNX6-205ENST00000555648 CPA1P15085 419 aa17.62■□□□□ 0.41
SNX6-205ENST00000555648 HOXC8P31273 242 aa17.62■□□□□ 0.41
SNX6-205ENST00000555648 HSPA4P34932 840 aa17.62■□□□□ 0.41
SNX6-205ENST00000555648 APOBRQ0VD83 1088 aa17.62■□□□□ 0.41
SNX6-205ENST00000555648 AP3B2Q13367 1082 aa17.62■□□□□ 0.41
SNX6-205ENST00000555648 TAF2Q6P1X5 1199 aa17.62■□□□□ 0.41
SNX6-205ENST00000555648 TRAF7Q6Q0C0 670 aa17.62■□□□□ 0.41
SNX6-205ENST00000555648 TMCO2Q7Z6W1 182 aaPredicted RBP17.62■□□□□ 0.41
SNX6-205ENST00000555648 MYOCDQ8IZQ8 938 aa17.62■□□□□ 0.41
SNX6-205ENST00000555648 CCDC12Q8WUD4 166 aaPredicted RBP17.62■□□□□ 0.41
SNX6-205ENST00000555648 LMBR1Q8WVP7 490 aa17.62■□□□□ 0.41
SNX6-205ENST00000555648 ATXN2LQ8WWM7 1075 aaKnown RBP17.62■□□□□ 0.41
SNX6-205ENST00000555648 PGBD1Q96JS3 809 aa17.62■□□□□ 0.41
SNX6-205ENST00000555648 KCNH7Q9NS40 1196 aa17.62■□□□□ 0.41
SNX6-205ENST00000555648 SLC9A2Q9UBY0 812 aa17.62■□□□□ 0.41
SNX6-205ENST00000555648 RFXAPO00287 272 aa17.61■□□□□ 0.41
SNX6-205ENST00000555648 CDC27P30260 824 aa17.61■□□□□ 0.41
SNX6-205ENST00000555648 ADD1P35611 737 aaKnown RBP17.61■□□□□ 0.41
SNX6-205ENST00000555648 FUT2Q10981 343 aa17.61■□□□□ 0.41
SNX6-205ENST00000555648 MBTPS1Q14703 1052 aa17.61■□□□□ 0.41
SNX6-205ENST00000555648 CEP55Q53EZ4 464 aa17.61■□□□□ 0.41
SNX6-205ENST00000555648 PRDM6Q9NQX0 595 aa17.61■□□□□ 0.41
SNX6-205ENST00000555648 TELO2Q9Y4R8 837 aa17.61■□□□□ 0.41
SNX6-205ENST00000555648 SNX14Q9Y5W7 946 aa17.61■□□□□ 0.41
SNX6-205ENST00000555648 GSTTP1A0A1W2PQM5 241 aa17.6■□□□□ 0.41
SNX6-205ENST00000555648 SCG2P13521 617 aa17.6■□□□□ 0.41
SNX6-205ENST00000555648 MRPS5P82675 430 aaKnown RBP17.6■□□□□ 0.41
SNX6-205ENST00000555648 GRIK4Q16099 956 aa17.6■□□□□ 0.41
SNX6-205ENST00000555648 PFKFB3Q16875 520 aaPredicted RBP17.6■□□□□ 0.41
SNX6-205ENST00000555648 PLEKHG4Q58EX7 1191 aa17.6■□□□□ 0.41
SNX6-205ENST00000555648 MCTP2Q6DN12 878 aa17.6■□□□□ 0.41
SNX6-205ENST00000555648 TYW1BQ6NUM6 668 aa17.6■□□□□ 0.41
SNX6-205ENST00000555648 APBB2Q92870 758 aa17.6■□□□□ 0.41
SNX6-205ENST00000555648 KCNB2Q92953 911 aa17.6■□□□□ 0.41
SNX6-205ENST00000555648 C6orf50Q9HD87 102 aa17.6■□□□□ 0.41
SNX6-205ENST00000555648 TUBE1Q9UJT0 475 aa17.6■□□□□ 0.41
SNX6-205ENST00000555648 TRPC6Q9Y210 931 aa17.6■□□□□ 0.41
SNX6-205ENST00000555648 INSL6Q9Y581 213 aa17.6■□□□□ 0.41
SNX6-205ENST00000555648 SCN5AQ14524 2016 aa17.59■□□□□ 0.41
SNX6-205ENST00000555648 RRN3P2A6NIE6 340 aa17.59■□□□□ 0.41
SNX6-205ENST00000555648 RPLP2P05387 115 aaKnown RBP17.59■□□□□ 0.41
SNX6-205ENST00000555648 RPS6KB1P23443 525 aa17.59■□□□□ 0.41
SNX6-205ENST00000555648 GNA11P29992 359 aa17.59■□□□□ 0.41
SNX6-205ENST00000555648 IGBP1P78318 339 aa17.59■□□□□ 0.41
SNX6-205ENST00000555648 TCTN1Q2MV58 587 aa17.59■□□□□ 0.41
SNX6-205ENST00000555648 JAKMIP3Q5VZ66 844 aa17.59■□□□□ 0.41
SNX6-205ENST00000555648 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.59■□□□□ 0.41
SNX6-205ENST00000555648 TGS1Q96RS0 853 aaKnown RBP17.59■□□□□ 0.41
SNX6-205ENST00000555648 FAM217BQ9NTX9 383 aaPredicted RBP17.59■□□□□ 0.41
SNX6-205ENST00000555648 TMEM260Q9NX78 707 aa17.59■□□□□ 0.41
SNX6-205ENST00000555648 TCEAL9Q9UHQ7 104 aa17.59■□□□□ 0.41
SNX6-205ENST00000555648 MTUS1Q9ULD2 1270 aa17.59■□□□□ 0.41
SNX6-205ENST00000555648 MTCH2Q9Y6C9 303 aa17.59■□□□□ 0.41
SNX6-205ENST00000555648 TANC1Q9C0D5 1861 aa17.58■□□□□ 0.41
SNX6-205ENST00000555648 NFASCO94856 1347 aa17.58■□□□□ 0.4
SNX6-205ENST00000555648 LCHNA4D1U4 455 aa17.58■□□□□ 0.4
SNX6-205ENST00000555648 ARP10275 920 aa17.58■□□□□ 0.4
SNX6-205ENST00000555648 SREBF1P36956 1147 aa17.58■□□□□ 0.4
SNX6-205ENST00000555648 AAK1Q2M2I8 961 aa17.58■□□□□ 0.4
SNX6-205ENST00000555648 CYP2W1Q8TAV3 490 aa17.58■□□□□ 0.4
SNX6-205ENST00000555648 ASB2Q96Q27 587 aa17.58■□□□□ 0.4
SNX6-205ENST00000555648 YME1L1Q96TA2 773 aa17.58■□□□□ 0.4
SNX6-205ENST00000555648 IFIH1Q9BYX4 1025 aaKnown RBP17.58■□□□□ 0.4
SNX6-205ENST00000555648 AGO4Q9HCK5 861 aaKnown RBP17.58■□□□□ 0.4
SNX6-205ENST00000555648 COL6A3P12111 3177 aa17.58■□□□□ 0.4
SNX6-205ENST00000555648 MYH7BA7E2Y1 1941 aa17.57■□□□□ 0.4
SNX6-205ENST00000555648 EPOPA6NHQ4 379 aa17.57■□□□□ 0.4
SNX6-205ENST00000555648 M0QZ92 97 aa17.57■□□□□ 0.4
SNX6-205ENST00000555648 BACH1O14867 736 aa17.57■□□□□ 0.4
SNX6-205ENST00000555648 ARHGEF15O94989 841 aa17.57■□□□□ 0.4
SNX6-205ENST00000555648 UPP2O95045 317 aa17.57■□□□□ 0.4
SNX6-205ENST00000555648 POU3F3P20264 500 aaPredicted RBP17.57■□□□□ 0.4
SNX6-205ENST00000555648 STAT5BP51692 787 aa17.57■□□□□ 0.4
SNX6-205ENST00000555648 ACTR2P61160 394 aa17.57■□□□□ 0.4
SNX6-205ENST00000555648 ADAM17P78536 824 aa17.57■□□□□ 0.4
SNX6-205ENST00000555648 GRB10Q13322 594 aa17.57■□□□□ 0.4
SNX6-205ENST00000555648 FAM26DQ5JW98 314 aa17.57■□□□□ 0.4
SNX6-205ENST00000555648 PLA2G4DQ86XP0 818 aa17.57■□□□□ 0.4
SNX6-205ENST00000555648 REXO1Q8N1G1 1221 aaKnown RBP17.57■□□□□ 0.4
SNX6-205ENST00000555648 BICD2Q8TD16 824 aa17.57■□□□□ 0.4
SNX6-205ENST00000555648 ESYT2A0FGR8 921 aa17.56■□□□□ 0.4
SNX6-205ENST00000555648 DDX39AO00148 427 aaKnown RBP17.56■□□□□ 0.4
SNX6-205ENST00000555648 MEIS1O00470 390 aa17.56■□□□□ 0.4
SNX6-205ENST00000555648 PRPF3O43395 683 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms