RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 DISC1Q9NRI5 854 aa12.56□□□□□ -0.4
SHMT2-220ENST00000555634 STK17AQ9UEE5 414 aa12.56□□□□□ -0.4
SHMT2-220ENST00000555634 TSKSQ9UJT2 592 aa12.56□□□□□ -0.4
SHMT2-220ENST00000555634 GJD2Q9UKL4 321 aa12.56□□□□□ -0.4
SHMT2-220ENST00000555634 VAV3Q9UKW4 847 aa12.56□□□□□ -0.4
SHMT2-220ENST00000555634 PCDHA10Q9Y5I2 948 aa12.56□□□□□ -0.4
SHMT2-220ENST00000555634 A0A1B0GVL5 298 aa12.55□□□□□ -0.4
SHMT2-220ENST00000555634 MSCO60682 206 aa12.55□□□□□ -0.4
SHMT2-220ENST00000555634 CYP2C19P33261 490 aa12.55□□□□□ -0.4
SHMT2-220ENST00000555634 CPT1AP50416 773 aa12.55□□□□□ -0.4
SHMT2-220ENST00000555634 AMPD3Q01432 767 aa12.55□□□□□ -0.4
SHMT2-220ENST00000555634 ITGB3BPQ13352 177 aaPredicted RBP12.55□□□□□ -0.4
SHMT2-220ENST00000555634 CCL14Q16627 93 aa12.55□□□□□ -0.4
SHMT2-220ENST00000555634 CCDC144BQ3MJ40 725 aa12.55□□□□□ -0.4
SHMT2-220ENST00000555634 DUSP28Q4G0W2 176 aa12.55□□□□□ -0.4
SHMT2-220ENST00000555634 SHC4Q6S5L8 630 aa12.55□□□□□ -0.4
SHMT2-220ENST00000555634 CYFIP1Q7L576 1253 aa12.55□□□□□ -0.4
SHMT2-220ENST00000555634 OTOP1Q7RTM1 612 aa12.55□□□□□ -0.4
SHMT2-220ENST00000555634 DNAJC5GQ8N7S2 189 aa12.55□□□□□ -0.4
SHMT2-220ENST00000555634 OR6J1Q8NGC5 347 aa12.55□□□□□ -0.4
SHMT2-220ENST00000555634 TRIB2Q92519 343 aa12.55□□□□□ -0.4
SHMT2-220ENST00000555634 CCDC47Q96A33 483 aaKnown RBP12.55□□□□□ -0.4
SHMT2-220ENST00000555634 SPATA33Q96N06 139 aa12.55□□□□□ -0.4
SHMT2-220ENST00000555634 UIMC1Q96RL1 719 aa12.55□□□□□ -0.4
SHMT2-220ENST00000555634 NUP62CLQ9H1M0 184 aa12.55□□□□□ -0.4
SHMT2-220ENST00000555634 UNC45AQ9H3U1 944 aa12.55□□□□□ -0.4
SHMT2-220ENST00000555634 ZNF215Q9UL58 517 aaPredicted RBP12.55□□□□□ -0.4
SHMT2-220ENST00000555634 GABRQQ9UN88 632 aa12.55□□□□□ -0.4
SHMT2-220ENST00000555634 CTAGE5O15320 804 aa12.54□□□□□ -0.4
SHMT2-220ENST00000555634 POLR2DO15514 142 aaKnown RBP12.54□□□□□ -0.4
SHMT2-220ENST00000555634 GADD45BO75293 160 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-220ENST00000555634 RGS20O76081 388 aa12.54□□□□□ -0.4
SHMT2-220ENST00000555634 FARP2O94887 1054 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-220ENST00000555634 SNAI1O95863 264 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-220ENST00000555634 P4HBP07237 508 aaKnown RBP12.54□□□□□ -0.4
SHMT2-220ENST00000555634 RARBP10826 455 aa12.54□□□□□ -0.4
SHMT2-220ENST00000555634 PRKAR2AP13861 404 aaKnown RBP12.54□□□□□ -0.4
SHMT2-220ENST00000555634 RPA1P27694 616 aa12.54□□□□□ -0.4
SHMT2-220ENST00000555634 CTGFP29279 349 aa12.54□□□□□ -0.4
SHMT2-220ENST00000555634 ADCYAP1R1P41586 468 aa12.54□□□□□ -0.4
SHMT2-220ENST00000555634 QARSP47897 775 aaKnown RBP12.54□□□□□ -0.4
SHMT2-220ENST00000555634 NDUFA8P51970 172 aa12.54□□□□□ -0.4
SHMT2-220ENST00000555634 ACTR2P61160 394 aa12.54□□□□□ -0.4
SHMT2-220ENST00000555634 EPHA7Q15375 998 aa12.54□□□□□ -0.4
SHMT2-220ENST00000555634 LY6KQ17RY6 165 aa12.54□□□□□ -0.4
SHMT2-220ENST00000555634 SPECC1Q5M775 1068 aa12.54□□□□□ -0.4
SHMT2-220ENST00000555634 CELF3Q5SZQ8 465 aaKnown RBP12.54□□□□□ -0.4
SHMT2-220ENST00000555634 TLK2Q86UE8 772 aa12.54□□□□□ -0.4
SHMT2-220ENST00000555634 CKAP2LQ8IYA6 745 aa12.54□□□□□ -0.4
SHMT2-220ENST00000555634 PDILTQ8N807 584 aa12.54□□□□□ -0.4
SHMT2-220ENST00000555634 CNNM3Q8NE01 707 aa12.54□□□□□ -0.4
SHMT2-220ENST00000555634 DHX58Q96C10 678 aa12.54□□□□□ -0.4
SHMT2-220ENST00000555634 FAM167AQ96KS9 214 aa12.54□□□□□ -0.4
SHMT2-220ENST00000555634 POLR3CQ9BUI4 534 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-220ENST00000555634 TNMDQ9H2S6 317 aa12.54□□□□□ -0.4
SHMT2-220ENST00000555634 ZSWIM4Q9H7M6 989 aa12.54□□□□□ -0.4
SHMT2-220ENST00000555634 DDX41Q9UJV9 622 aaKnown RBP12.54□□□□□ -0.4
SHMT2-220ENST00000555634 RBM47A0AV96 593 aaKnown RBP12.53□□□□□ -0.4
SHMT2-220ENST00000555634 EDIL3O43854 480 aa12.53□□□□□ -0.4
SHMT2-220ENST00000555634 TRAK2O60296 914 aa12.53□□□□□ -0.4
SHMT2-220ENST00000555634 ZEB2O60315 1214 aa12.53□□□□□ -0.4
SHMT2-220ENST00000555634 LETM1O95202 739 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-220ENST00000555634 SUPT20HL2P0C7V6 817 aa12.53□□□□□ -0.4
SHMT2-220ENST00000555634 CYBAP13498 195 aa12.53□□□□□ -0.4
SHMT2-220ENST00000555634 GRK4P32298 578 aa12.53□□□□□ -0.4
SHMT2-220ENST00000555634 SLC26A2P50443 739 aa12.53□□□□□ -0.4
SHMT2-220ENST00000555634 PSMC5P62195 406 aa12.53□□□□□ -0.4
SHMT2-220ENST00000555634 CYP4A11Q02928 519 aa12.53□□□□□ -0.4
SHMT2-220ENST00000555634 GRIN1Q05586 938 aa12.53□□□□□ -0.4
SHMT2-220ENST00000555634 SEMA3FQ13275 785 aa12.53□□□□□ -0.4
SHMT2-220ENST00000555634 KARSQ15046 597 aaKnown RBP12.53□□□□□ -0.4
SHMT2-220ENST00000555634 PKN2Q16513 984 aaKnown RBP12.53□□□□□ -0.4
SHMT2-220ENST00000555634 SLC9C1Q4G0N8 1177 aa12.53□□□□□ -0.4
SHMT2-220ENST00000555634 CCDC183Q5T5S1 534 aa12.53□□□□□ -0.4
SHMT2-220ENST00000555634 PPTC7Q8NI37 304 aa12.53□□□□□ -0.4
SHMT2-220ENST00000555634 SEPT1Q8WYJ6 367 aa12.53□□□□□ -0.4
SHMT2-220ENST00000555634 GJA10Q969M2 543 aa12.53□□□□□ -0.4
SHMT2-220ENST00000555634 EMID1Q96A84 441 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-220ENST00000555634 EPSTI1Q96J88 318 aa12.53□□□□□ -0.4
SHMT2-220ENST00000555634 TIGD1Q96MW7 591 aa12.53□□□□□ -0.4
SHMT2-220ENST00000555634 EIF2AK1Q9BQI3 630 aaKnown RBP12.53□□□□□ -0.4
SHMT2-220ENST00000555634 LXNQ9BS40 222 aa12.53□□□□□ -0.4
SHMT2-220ENST00000555634 ZNF302Q9NR11 478 aa12.53□□□□□ -0.4
SHMT2-220ENST00000555634 BMP2KQ9NSY1 1161 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-220ENST00000555634 DACT1Q9NYF0 836 aa12.53□□□□□ -0.4
SHMT2-220ENST00000555634 FLRT1Q9NZU1 646 aa12.53□□□□□ -0.4
SHMT2-220ENST00000555634 DNM3Q9UQ16 869 aa12.53□□□□□ -0.4
SHMT2-220ENST00000555634 Q9Y3F1 56 aa12.53□□□□□ -0.4
SHMT2-220ENST00000555634 EMSYQ7Z589 1322 aa12.53□□□□□ -0.4
SHMT2-220ENST00000555634 FAM237AA0A1B0GTK4 181 aa12.52□□□□□ -0.41
SHMT2-220ENST00000555634 POTEB3A0JP26 581 aa12.52□□□□□ -0.41
SHMT2-220ENST00000555634 PP2D1A8MPX8 630 aa12.52□□□□□ -0.41
SHMT2-220ENST00000555634 SEPT4O43236 478 aa12.52□□□□□ -0.41
SHMT2-220ENST00000555634 SORBS3O60504 671 aa12.52□□□□□ -0.41
SHMT2-220ENST00000555634 ATP9AO75110 1047 aa12.52□□□□□ -0.41
SHMT2-220ENST00000555634 ZNF202O95125 648 aa12.52□□□□□ -0.41
SHMT2-220ENST00000555634 KRT18P05783 430 aaKnown RBP12.52□□□□□ -0.41
SHMT2-220ENST00000555634 MYL1P05976 194 aa12.52□□□□□ -0.41
SHMT2-220ENST00000555634 HSPA1AP0DMV8 641 aaKnown RBP12.52□□□□□ -0.41
SHMT2-220ENST00000555634 HSPA1BP0DMV9 641 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms