RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 PLEKHG4Q58EX7 1191 aa10.73□□□□□ -0.69
PRKCH-218ENST00000555628 SYDE2Q5VT97 1194 aa10.73□□□□□ -0.69
PRKCH-218ENST00000555628 FAM117BQ6P1L5 589 aa10.73□□□□□ -0.69
PRKCH-218ENST00000555628 RNF207Q6ZRF8 634 aa10.73□□□□□ -0.69
PRKCH-218ENST00000555628 FBXO11Q86XK2 927 aa10.73□□□□□ -0.69
PRKCH-218ENST00000555628 MFSD14AQ96MC6 490 aa10.73□□□□□ -0.69
PRKCH-218ENST00000555628 SAMD11Q96NU1 681 aa10.73□□□□□ -0.69
PRKCH-218ENST00000555628 SEC62Q99442 399 aaKnown RBP10.73□□□□□ -0.69
PRKCH-218ENST00000555628 NSUN3Q9H649 340 aaKnown RBP10.73□□□□□ -0.69
PRKCH-218ENST00000555628 RC3H2Q9HBD1 1191 aaKnown RBP10.73□□□□□ -0.69
PRKCH-218ENST00000555628 ECHDC1Q9NTX5 307 aa10.73□□□□□ -0.69
PRKCH-218ENST00000555628 COL20A1Q9P218 1284 aa10.73□□□□□ -0.69
PRKCH-218ENST00000555628 CTNNA3Q9UI47 895 aa10.73□□□□□ -0.69
PRKCH-218ENST00000555628 STX8Q9UNK0 236 aa10.73□□□□□ -0.69
PRKCH-218ENST00000555628 V9GY48 417 aaPredicted RBP10.73□□□□□ -0.69
PRKCH-218ENST00000555628 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.72□□□□□ -0.69
PRKCH-218ENST00000555628 C5orf67F2Z3F1 127 aa10.72□□□□□ -0.69
PRKCH-218ENST00000555628 MBTPS2O43462 519 aa10.72□□□□□ -0.69
PRKCH-218ENST00000555628 SMARCA5O60264 1052 aaPredicted RBP10.72□□□□□ -0.69
PRKCH-218ENST00000555628 HMMRO75330 724 aa10.72□□□□□ -0.69
PRKCH-218ENST00000555628 ZFYP08048 801 aaPredicted RBP10.72□□□□□ -0.69
PRKCH-218ENST00000555628 SNHG28P0DPA3 235 aa10.72□□□□□ -0.69
PRKCH-218ENST00000555628 CALML3P27482 149 aa10.72□□□□□ -0.69
PRKCH-218ENST00000555628 SLC19A1P41440 591 aa10.72□□□□□ -0.69
PRKCH-218ENST00000555628 ZNF200P98182 395 aaPredicted RBP10.72□□□□□ -0.69
PRKCH-218ENST00000555628 HYAL1Q12794 435 aa10.72□□□□□ -0.69
PRKCH-218ENST00000555628 LY6KQ17RY6 165 aa10.72□□□□□ -0.69
PRKCH-218ENST00000555628 TSHZ3Q63HK5 1081 aa10.72□□□□□ -0.69
PRKCH-218ENST00000555628 RPAINQ86UA6 219 aa10.72□□□□□ -0.69
PRKCH-218ENST00000555628 SERINC5Q86VE9 423 aa10.72□□□□□ -0.69
PRKCH-218ENST00000555628 RNF135Q8IUD6 432 aa10.72□□□□□ -0.69
PRKCH-218ENST00000555628 RGS22Q8NE09 1264 aa10.72□□□□□ -0.69
PRKCH-218ENST00000555628 DBF4BQ8NFT6 615 aa10.72□□□□□ -0.69
PRKCH-218ENST00000555628 EDAQ92838 391 aa10.72□□□□□ -0.69
PRKCH-218ENST00000555628 USB1Q9BQ65 265 aaKnown RBP10.72□□□□□ -0.69
PRKCH-218ENST00000555628 IRX2Q9BZI1 471 aaPredicted RBP10.72□□□□□ -0.69
PRKCH-218ENST00000555628 ANAPC4Q9UJX5 808 aa10.72□□□□□ -0.69
PRKCH-218ENST00000555628 FRYLO94915 3013 aa10.71□□□□□ -0.69
PRKCH-218ENST00000555628 CCER2I3L3R5 266 aa10.71□□□□□ -0.69
PRKCH-218ENST00000555628 ORC4O43929 436 aa10.71□□□□□ -0.69
PRKCH-218ENST00000555628 GH1P01241 217 aa10.71□□□□□ -0.69
PRKCH-218ENST00000555628 PDHBP11177 359 aa10.71□□□□□ -0.69
PRKCH-218ENST00000555628 GPM6BQ13491 265 aa10.71□□□□□ -0.69
PRKCH-218ENST00000555628 CAMK1Q14012 370 aa10.71□□□□□ -0.69
PRKCH-218ENST00000555628 EMSYQ7Z589 1322 aa10.71□□□□□ -0.69
PRKCH-218ENST00000555628 TMEM192Q8IY95 271 aa10.71□□□□□ -0.69
PRKCH-218ENST00000555628 TOP1MTQ969P6 601 aa10.71□□□□□ -0.69
PRKCH-218ENST00000555628 MSLNLQ96KJ4 702 aa10.71□□□□□ -0.69
PRKCH-218ENST00000555628 ISY1Q9ULR0 285 aaKnown RBP10.71□□□□□ -0.69
PRKCH-218ENST00000555628 FAM50BQ9Y247 325 aa10.71□□□□□ -0.69
PRKCH-218ENST00000555628 KIAA1671Q9BY89 1806 aa10.7□□□□□ -0.7
PRKCH-218ENST00000555628 FRMPD2Q68DX3 1309 aaPredicted RBP10.7□□□□□ -0.7
PRKCH-218ENST00000555628 AMHP03971 560 aa10.7□□□□□ -0.7
PRKCH-218ENST00000555628 ZNF286BP0CG31 522 aa10.7□□□□□ -0.7
PRKCH-218ENST00000555628 CTDSPL2Q05D32 466 aa10.7□□□□□ -0.7
PRKCH-218ENST00000555628 ZNF543Q08ER8 600 aa10.7□□□□□ -0.7
PRKCH-218ENST00000555628 SMAD4Q13485 552 aaKnown RBP10.7□□□□□ -0.7
PRKCH-218ENST00000555628 CBX2Q14781 532 aaPredicted RBP10.7□□□□□ -0.7
PRKCH-218ENST00000555628 CCDC96Q2M329 555 aa10.7□□□□□ -0.7
PRKCH-218ENST00000555628 MSS51Q4VC12 460 aa10.7□□□□□ -0.7
PRKCH-218ENST00000555628 ZMYM1Q5SVZ6 1142 aa10.7□□□□□ -0.7
PRKCH-218ENST00000555628 MYOCDQ8IZQ8 938 aa10.7□□□□□ -0.7
PRKCH-218ENST00000555628 PPTC7Q8NI37 304 aa10.7□□□□□ -0.7
PRKCH-218ENST00000555628 TMEM47Q9BQJ4 181 aa10.7□□□□□ -0.7
PRKCH-218ENST00000555628 UPF3BQ9BZI7 483 aaKnown RBP10.7□□□□□ -0.7
PRKCH-218ENST00000555628 LRRCC1Q9C099 1032 aa10.7□□□□□ -0.7
PRKCH-218ENST00000555628 MAF1Q9H063 256 aa10.7□□□□□ -0.7
PRKCH-218ENST00000555628 CLDND1Q9NY35 253 aa10.7□□□□□ -0.7
PRKCH-218ENST00000555628 DDX41Q9UJV9 622 aaKnown RBP10.7□□□□□ -0.7
PRKCH-218ENST00000555628 FCF1Q9Y324 198 aaKnown RBP10.7□□□□□ -0.7
PRKCH-218ENST00000555628 MYH7BA7E2Y1 1941 aa10.7□□□□□ -0.7
PRKCH-218ENST00000555628 TMEM221A6NGB7 291 aa10.69□□□□□ -0.7
PRKCH-218ENST00000555628 TSPY2A6NKD2 308 aa10.69□□□□□ -0.7
PRKCH-218ENST00000555628 LOC730098B7Z3J9 87 aa10.69□□□□□ -0.7
PRKCH-218ENST00000555628 M0R296 226 aa10.69□□□□□ -0.7
PRKCH-218ENST00000555628 GRM6O15303 877 aa10.69□□□□□ -0.7
PRKCH-218ENST00000555628 EYA4O95677 639 aa10.69□□□□□ -0.7
PRKCH-218ENST00000555628 APPP05067 770 aa10.69□□□□□ -0.7
PRKCH-218ENST00000555628 CASTP20810 708 aaKnown RBP10.69□□□□□ -0.7
PRKCH-218ENST00000555628 GTF2F1P35269 517 aaKnown RBP eCLIP10.69□□□□□ -0.7
PRKCH-218ENST00000555628 DGKDQ16760 1214 aa10.69□□□□□ -0.7
PRKCH-218ENST00000555628 KIAA0753Q2KHM9 967 aa10.69□□□□□ -0.7
PRKCH-218ENST00000555628 TRIM67Q6ZTA4 783 aa10.69□□□□□ -0.7
PRKCH-218ENST00000555628 C7orf31Q8N865 590 aa10.69□□□□□ -0.7
PRKCH-218ENST00000555628 SYTL5Q8TDW5 730 aaPredicted RBP10.69□□□□□ -0.7
PRKCH-218ENST00000555628 TBC1D5Q92609 795 aa10.69□□□□□ -0.7
PRKCH-218ENST00000555628 CLP1Q92989 425 aaKnown RBP10.69□□□□□ -0.7
PRKCH-218ENST00000555628 ASIC4Q96FT7 647 aa10.69□□□□□ -0.7
PRKCH-218ENST00000555628 POP1Q99575 1024 aaKnown RBP10.69□□□□□ -0.7
PRKCH-218ENST00000555628 NACAP1Q9BZK3 213 aa10.69□□□□□ -0.7
PRKCH-218ENST00000555628 NAPBQ9H115 298 aa10.69□□□□□ -0.7
PRKCH-218ENST00000555628 PCDHB15Q9Y5E8 787 aa10.69□□□□□ -0.7
PRKCH-218ENST00000555628 ZFHX4Q86UP3 3567 aa10.69□□□□□ -0.7
PRKCH-218ENST00000555628 TTC3P53804 2025 aa10.68□□□□□ -0.7
PRKCH-218ENST00000555628 EPG5Q9HCE0 2579 aa10.68□□□□□ -0.7
PRKCH-218ENST00000555628 LINC01565O15544 149 aa10.68□□□□□ -0.7
PRKCH-218ENST00000555628 NCK2O43639 380 aa10.68□□□□□ -0.7
PRKCH-218ENST00000555628 SLC3A2P08195 630 aaKnown RBP10.68□□□□□ -0.7
PRKCH-218ENST00000555628 TOP1P11387 765 aaKnown RBP10.68□□□□□ -0.7
PRKCH-218ENST00000555628 CHMP4BP1P59074 171 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms