RNA–Protein interactions for RNA: ENST00000555518.5

LINC00643-203, long intergenic non-protein coding RNA 643, humanhuman

TSL 4

Gene LINC00643, Length 552 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-203ENST00000555518 POLLQ9UGP5 575 aa7.58□□□□□ -1.2
LINC00643-203ENST00000555518 MYH7P12883 1935 aa7.58□□□□□ -1.2
LINC00643-203ENST00000555518 BRCA1P38398 1863 aaKnown RBP7.58□□□□□ -1.2
LINC00643-203ENST00000555518 PDS5AQ29RF7 1337 aaKnown RBP7.57□□□□□ -1.2
LINC00643-203ENST00000555518 RAD50Q92878 1312 aa7.57□□□□□ -1.2
LINC00643-203ENST00000555518 SOWAHDA6NJG2 315 aa7.57□□□□□ -1.2
LINC00643-203ENST00000555518 TMEM253P0C7T8 217 aa7.57□□□□□ -1.2
LINC00643-203ENST00000555518 RAC2P15153 192 aa7.57□□□□□ -1.2
LINC00643-203ENST00000555518 GORABQ5T7V8 394 aa7.57□□□□□ -1.2
LINC00643-203ENST00000555518 LLGL2Q6P1M3 1020 aa7.57□□□□□ -1.2
LINC00643-203ENST00000555518 ZNF589Q86UQ0 364 aaPredicted RBP7.57□□□□□ -1.2
LINC00643-203ENST00000555518 MFSD2AQ8NA29 543 aa7.57□□□□□ -1.2
LINC00643-203ENST00000555518 TBC1D16Q8TBP0 767 aa7.57□□□□□ -1.2
LINC00643-203ENST00000555518 ELMO3Q96BJ8 720 aa7.57□□□□□ -1.2
LINC00643-203ENST00000555518 C22orf23Q9BZE7 217 aa7.57□□□□□ -1.2
LINC00643-203ENST00000555518 SEMA3GQ9NS98 782 aa7.57□□□□□ -1.2
LINC00643-203ENST00000555518 TPX2Q9ULW0 747 aaKnown RBP7.57□□□□□ -1.2
LINC00643-203ENST00000555518 CYP8B1Q9UNU6 501 aa7.57□□□□□ -1.2
LINC00643-203ENST00000555518 ZNF646O15015 1829 aaPredicted RBP7.57□□□□□ -1.2
LINC00643-203ENST00000555518 TCRBV5S4A2TA0A5A2 114 aa7.56□□□□□ -1.2
LINC00643-203ENST00000555518 DCDC2CA8MYV0 355 aa7.56□□□□□ -1.2
LINC00643-203ENST00000555518 H0YIN7 160 aa7.56□□□□□ -1.2
LINC00643-203ENST00000555518 HIP1O00291 1037 aa7.56□□□□□ -1.2
LINC00643-203ENST00000555518 FOXP2O15409 715 aa7.56□□□□□ -1.2
LINC00643-203ENST00000555518 RNF113AO15541 343 aaKnown RBP7.56□□□□□ -1.2
LINC00643-203ENST00000555518 UFL1O94874 794 aa7.56□□□□□ -1.2
LINC00643-203ENST00000555518 C1QTNF9P0C862 333 aa7.56□□□□□ -1.2
LINC00643-203ENST00000555518 DPEP1P16444 411 aa7.56□□□□□ -1.2
LINC00643-203ENST00000555518 BMP6P22004 513 aa7.56□□□□□ -1.2
LINC00643-203ENST00000555518 ALDH1B1P30837 517 aa7.56□□□□□ -1.2
LINC00643-203ENST00000555518 CAP2P40123 477 aa7.56□□□□□ -1.2
LINC00643-203ENST00000555518 CASC1Q6TDU7 716 aa7.56□□□□□ -1.2
LINC00643-203ENST00000555518 NXPE4Q6UWF7 544 aa7.56□□□□□ -1.2
LINC00643-203ENST00000555518 CWC27Q6UX04 472 aaKnown RBP7.56□□□□□ -1.2
LINC00643-203ENST00000555518 C12orf40Q86WS4 652 aa7.56□□□□□ -1.2
LINC00643-203ENST00000555518 TDRD7Q8NHU6 1098 aaKnown RBP7.56□□□□□ -1.2
LINC00643-203ENST00000555518 ZNF384Q8TF68 577 aa7.56□□□□□ -1.2
LINC00643-203ENST00000555518 OSBP2Q969R2 916 aa7.56□□□□□ -1.2
LINC00643-203ENST00000555518 HSPA12BQ96MM6 686 aa7.56□□□□□ -1.2
LINC00643-203ENST00000555518 SEC62Q99442 399 aaKnown RBP7.56□□□□□ -1.2
LINC00643-203ENST00000555518 ATP13A1Q9HD20 1204 aa7.56□□□□□ -1.2
LINC00643-203ENST00000555518 DIAPH3Q9NSV4 1193 aa7.56□□□□□ -1.2
LINC00643-203ENST00000555518 PCDHA4Q9UN74 947 aa7.56□□□□□ -1.2
LINC00643-203ENST00000555518 CSADQ9Y600 493 aa7.56□□□□□ -1.2
LINC00643-203ENST00000555518 CHD4Q14839 1912 aa7.56□□□□□ -1.2
LINC00643-203ENST00000555518 NCANO14594 1321 aa7.55□□□□□ -1.2
LINC00643-203ENST00000555518 MAST3O60307 1309 aa7.55□□□□□ -1.2
LINC00643-203ENST00000555518 MYH13Q9UKX3 1938 aa7.55□□□□□ -1.2
LINC00643-203ENST00000555518 KRTAP9-7A8MTY7 169 aa7.55□□□□□ -1.2
LINC00643-203ENST00000555518 M0R2C6 588 aa7.55□□□□□ -1.2
LINC00643-203ENST00000555518 PRRG2O14669 202 aa7.55□□□□□ -1.2
LINC00643-203ENST00000555518 GIPC1O14908 333 aa7.55□□□□□ -1.2
LINC00643-203ENST00000555518 EPB41L2O43491 1005 aaKnown RBP7.55□□□□□ -1.2
LINC00643-203ENST00000555518 REC8O95072 547 aa7.55□□□□□ -1.2
LINC00643-203ENST00000555518 CYP7A1P22680 504 aa7.55□□□□□ -1.2
LINC00643-203ENST00000555518 HIBADHP31937 336 aaKnown RBP7.55□□□□□ -1.2
LINC00643-203ENST00000555518 ADD2P35612 726 aa7.55□□□□□ -1.2
LINC00643-203ENST00000555518 KCNJ4P48050 445 aa7.55□□□□□ -1.2
LINC00643-203ENST00000555518 PTH1RQ03431 593 aa7.55□□□□□ -1.2
LINC00643-203ENST00000555518 CCDC129Q6ZRS4 1044 aa7.55□□□□□ -1.2
LINC00643-203ENST00000555518 TTLL10Q6ZVT0 673 aa7.55□□□□□ -1.2
LINC00643-203ENST00000555518 C3orf58Q8NDZ4 430 aa7.55□□□□□ -1.2
LINC00643-203ENST00000555518 ZNF622Q969S3 477 aaKnown RBP eCLIP7.55□□□□□ -1.2
LINC00643-203ENST00000555518 ALPK1Q96QP1 1244 aa7.55□□□□□ -1.2
LINC00643-203ENST00000555518 RTFDC1Q9BY42 306 aaPredicted RBP7.55□□□□□ -1.2
LINC00643-203ENST00000555518 EPB41L4BQ9H329 900 aa7.55□□□□□ -1.2
LINC00643-203ENST00000555518 NSUN3Q9H649 340 aaKnown RBP7.55□□□□□ -1.2
LINC00643-203ENST00000555518 WWC3Q9ULE0 1092 aa7.55□□□□□ -1.2
LINC00643-203ENST00000555518 PALD1Q9ULE6 856 aa7.55□□□□□ -1.2
LINC00643-203ENST00000555518 CCDC171Q6TFL3 1326 aa7.54□□□□□ -1.2
LINC00643-203ENST00000555518 MAST2Q6P0Q8 1798 aa7.54□□□□□ -1.2
LINC00643-203ENST00000555518 A0A0G2JLW4 131 aa7.54□□□□□ -1.2
LINC00643-203ENST00000555518 ENC1O14682 589 aa7.54□□□□□ -1.2
LINC00643-203ENST00000555518 ZFYP08048 801 aaPredicted RBP7.54□□□□□ -1.2
LINC00643-203ENST00000555518 IL1R1P14778 569 aa7.54□□□□□ -1.2
LINC00643-203ENST00000555518 PDE6AP16499 860 aa7.54□□□□□ -1.2
LINC00643-203ENST00000555518 TTF1Q15361 905 aaPredicted RBP7.54□□□□□ -1.2
LINC00643-203ENST00000555518 UBE3CQ15386 1083 aa7.54□□□□□ -1.2
LINC00643-203ENST00000555518 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.54□□□□□ -1.2
LINC00643-203ENST00000555518 CAVIN4Q5BKX8 364 aa7.54□□□□□ -1.2
LINC00643-203ENST00000555518 FBF1Q8TES7 1133 aa7.54□□□□□ -1.2
LINC00643-203ENST00000555518 RUFY2Q8WXA3 655 aa7.54□□□□□ -1.2
LINC00643-203ENST00000555518 CD209Q9NNX6 404 aa7.54□□□□□ -1.2
LINC00643-203ENST00000555518 HELLSQ9NRZ9 838 aa7.54□□□□□ -1.2
LINC00643-203ENST00000555518 GNL3LQ9NVN8 582 aaKnown RBP7.54□□□□□ -1.2
LINC00643-203ENST00000555518 C19orf73Q9NVV2 129 aa7.54□□□□□ -1.2
LINC00643-203ENST00000555518 DENND2AQ9ULE3 1009 aa7.54□□□□□ -1.2
LINC00643-203ENST00000555518 COL4A5P29400 1685 aa7.54□□□□□ -1.2
LINC00643-203ENST00000555518 SALL1Q9NSC2 1324 aa7.53□□□□□ -1.2
LINC00643-203ENST00000555518 SCN9AQ15858 1988 aa7.53□□□□□ -1.2
LINC00643-203ENST00000555518 EIF5BO60841 1220 aaKnown RBP7.53□□□□□ -1.2
LINC00643-203ENST00000555518 SLITRK5O94991 958 aa7.53□□□□□ -1.2
LINC00643-203ENST00000555518 MED14OSP0DP75 135 aa7.53□□□□□ -1.2
LINC00643-203ENST00000555518 GLDCP23378 1020 aa7.53□□□□□ -1.2
LINC00643-203ENST00000555518 POLD1P28340 1107 aa7.53□□□□□ -1.2
LINC00643-203ENST00000555518 HSPA4P34932 840 aa7.53□□□□□ -1.2
LINC00643-203ENST00000555518 KIR3DL1P43629 444 aa7.53□□□□□ -1.2
LINC00643-203ENST00000555518 TGFB2P61812 414 aa7.53□□□□□ -1.2
LINC00643-203ENST00000555518 PLCB3Q01970 1234 aa7.53□□□□□ -1.2
LINC00643-203ENST00000555518 MCMDC2Q4G0Z9 681 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms