RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 USH1GQ495M9 461 aa26.25■■□□□ 1.79
STRN3-207ENST00000555358 USP17L6PQ6QN14 398 aa26.25■■□□□ 1.79
STRN3-207ENST00000555358 FAM114A1Q8IWE2 563 aa26.25■■□□□ 1.79
STRN3-207ENST00000555358 LCMT1Q9UIC8 334 aa26.25■■□□□ 1.79
STRN3-207ENST00000555358 POLR2AP24928 1970 aaKnown RBP26.25■■□□□ 1.79
STRN3-207ENST00000555358 FCER1AP12319 257 aa26.24■■□□□ 1.79
STRN3-207ENST00000555358 STAT2P52630 851 aa26.24■■□□□ 1.79
STRN3-207ENST00000555358 MAP9Q49MG5 647 aa26.24■■□□□ 1.79
STRN3-207ENST00000555358 YBX3P16989 372 aaKnown RBP eCLIP26.24■■□□□ 1.79
STRN3-207ENST00000555358 MRPL12P52815 198 aaKnown RBP26.24■■□□□ 1.79
STRN3-207ENST00000555358 HIRAP54198 1017 aaPredicted RBP26.24■■□□□ 1.79
STRN3-207ENST00000555358 NOC4LQ9BVI4 516 aaKnown RBP26.24■■□□□ 1.79
STRN3-207ENST00000555358 ZNF263O14978 683 aa26.23■■□□□ 1.79
STRN3-207ENST00000555358 ZNF185O15231 689 aa26.23■■□□□ 1.79
STRN3-207ENST00000555358 PRPF6O94906 941 aaKnown RBP26.23■■□□□ 1.79
STRN3-207ENST00000555358 MTIF2P46199 727 aaKnown RBP26.23■■□□□ 1.79
STRN3-207ENST00000555358 ASIC1P78348 528 aa26.23■■□□□ 1.79
STRN3-207ENST00000555358 CYP27A1Q02318 531 aa26.23■■□□□ 1.79
STRN3-207ENST00000555358 COBLL1Q53SF7 1204 aa26.23■■□□□ 1.79
STRN3-207ENST00000555358 CCDC47Q96A33 483 aaKnown RBP26.23■■□□□ 1.79
STRN3-207ENST00000555358 AMNQ9BXJ7 453 aa26.23■■□□□ 1.79
STRN3-207ENST00000555358 ZNF341Q9BYN7 854 aa26.23■■□□□ 1.79
STRN3-207ENST00000555358 FAM204AQ9H8W3 233 aa26.23■■□□□ 1.79
STRN3-207ENST00000555358 FZD1Q9UP38 647 aa26.23■■□□□ 1.79
STRN3-207ENST00000555358 IPO7O95373 1038 aaKnown RBP26.23■■□□□ 1.79
STRN3-207ENST00000555358 VAV2P52735 878 aa26.23■■□□□ 1.79
STRN3-207ENST00000555358 FBXO11Q86XK2 927 aa26.23■■□□□ 1.79
STRN3-207ENST00000555358 RNF40O75150 1001 aa26.22■■□□□ 1.79
STRN3-207ENST00000555358 DDNO94850 711 aaPredicted RBP26.22■■□□□ 1.79
STRN3-207ENST00000555358 TDP2O95551 362 aa26.22■■□□□ 1.79
STRN3-207ENST00000555358 IVLP07476 585 aa26.22■■□□□ 1.79
STRN3-207ENST00000555358 INPP5BP32019 993 aa26.22■■□□□ 1.79
STRN3-207ENST00000555358 PPP1R2P41236 205 aa26.22■■□□□ 1.79
STRN3-207ENST00000555358 POTEDQ86YR6 584 aa26.22■■□□□ 1.79
STRN3-207ENST00000555358 KIAA0895Q8NCT3 520 aa26.22■■□□□ 1.79
STRN3-207ENST00000555358 COG1Q8WTW3 980 aa26.22■■□□□ 1.79
STRN3-207ENST00000555358 MMTAG2Q9BU76 263 aaKnown RBP26.22■■□□□ 1.79
STRN3-207ENST00000555358 IDEP14735 1019 aa26.22■■□□□ 1.79
STRN3-207ENST00000555358 SRLQ86TD4 932 aa26.22■■□□□ 1.79
STRN3-207ENST00000555358 GGA3Q9NZ52 723 aa26.22■■□□□ 1.79
STRN3-207ENST00000555358 MYBL2P10244 700 aa26.21■■□□□ 1.79
STRN3-207ENST00000555358 HNRNPH3P31942 346 aaKnown RBP26.21■■□□□ 1.79
STRN3-207ENST00000555358 TNNT3P45378 269 aaPredicted RBP26.21■■□□□ 1.79
STRN3-207ENST00000555358 PCMTD1Q96MG8 357 aaPredicted RBP26.21■■□□□ 1.79
STRN3-207ENST00000555358 SEMA6BQ9H3T3 888 aa26.21■■□□□ 1.79
STRN3-207ENST00000555358 RNF181Q9P0P0 153 aa26.21■■□□□ 1.79
STRN3-207ENST00000555358 MACROD2A1Z1Q3 448 aa26.2■■□□□ 1.79
STRN3-207ENST00000555358 MYO1CO00159 1063 aa26.2■■□□□ 1.79
STRN3-207ENST00000555358 SLC37A4O43826 429 aa26.2■■□□□ 1.79
STRN3-207ENST00000555358 DGKZQ13574 1117 aa26.2■■□□□ 1.79
STRN3-207ENST00000555358 SAMD1Q6SPF0 538 aaPredicted RBP26.2■■□□□ 1.79
STRN3-207ENST00000555358 SECISBP2LQ93073 1101 aaKnown RBP26.2■■□□□ 1.79
STRN3-207ENST00000555358 SH2D4AQ9H788 454 aa26.2■■□□□ 1.79
STRN3-207ENST00000555358 FBXO28Q9NVF7 368 aa26.2■■□□□ 1.79
STRN3-207ENST00000555358 ZMYND10O75800 440 aa26.2■■□□□ 1.78
STRN3-207ENST00000555358 PLEKP08567 350 aaPredicted RBP26.2■■□□□ 1.78
STRN3-207ENST00000555358 KIF5AQ12840 1032 aa26.2■■□□□ 1.78
STRN3-207ENST00000555358 CAGE1Q8TC20 777 aa26.2■■□□□ 1.78
STRN3-207ENST00000555358 HPS3Q969F9 1004 aa26.2■■□□□ 1.78
STRN3-207ENST00000555358 TSGA10Q9BZW7 698 aa26.2■■□□□ 1.78
STRN3-207ENST00000555358 LRWD1Q9UFC0 647 aa26.2■■□□□ 1.78
STRN3-207ENST00000555358 MEIS2O14770 477 aa26.19■■□□□ 1.78
STRN3-207ENST00000555358 CENPPQ6IPU0 288 aa26.19■■□□□ 1.78
STRN3-207ENST00000555358 FOXR1Q6PIV2 292 aa26.19■■□□□ 1.78
STRN3-207ENST00000555358 CCNI2Q6ZMN8 369 aaPredicted RBP26.19■■□□□ 1.78
STRN3-207ENST00000555358 KRT26Q7Z3Y9 468 aa26.19■■□□□ 1.78
STRN3-207ENST00000555358 APOBEC3FQ8IUX4 373 aaKnown RBP26.19■■□□□ 1.78
STRN3-207ENST00000555358 P2RX7Q99572 595 aaKnown RBP26.19■■□□□ 1.78
STRN3-207ENST00000555358 PLAGL2Q9UPG8 496 aa26.19■■□□□ 1.78
STRN3-207ENST00000555358 CTNND1O60716 968 aaKnown RBP26.19■■□□□ 1.78
STRN3-207ENST00000555358 TECP42680 631 aa26.19■■□□□ 1.78
STRN3-207ENST00000555358 CNNM4Q6P4Q7 775 aa26.19■■□□□ 1.78
STRN3-207ENST00000555358 RRP15Q9Y3B9 282 aaKnown RBP26.19■■□□□ 1.78
STRN3-207ENST00000555358 C2orf54Q08AI8 447 aa26.18■■□□□ 1.78
STRN3-207ENST00000555358 FKBP15Q5T1M5 1219 aa26.18■■□□□ 1.78
STRN3-207ENST00000555358 LRRC31Q6UY01 552 aa26.18■■□□□ 1.78
STRN3-207ENST00000555358 GSPT2Q8IYD1 628 aaKnown RBP26.18■■□□□ 1.78
STRN3-207ENST00000555358 IQCDQ96DY2 449 aa26.18■■□□□ 1.78
STRN3-207ENST00000555358 CCDC42Q96M95 316 aa26.18■■□□□ 1.78
STRN3-207ENST00000555358 JADE2Q9NQC1 790 aa26.18■■□□□ 1.78
STRN3-207ENST00000555358 ARHGAP20Q9P2F6 1191 aa26.18■■□□□ 1.78
STRN3-207ENST00000555358 SNX12Q9UMY4 172 aa26.18■■□□□ 1.78
STRN3-207ENST00000555358 SIK3Q9Y2K2 1263 aa26.18■■□□□ 1.78
STRN3-207ENST00000555358 OPLAHO14841 1288 aa26.18■■□□□ 1.78
STRN3-207ENST00000555358 AMPD3Q01432 767 aa26.18■■□□□ 1.78
STRN3-207ENST00000555358 CCDC174Q6PII3 467 aa26.18■■□□□ 1.78
STRN3-207ENST00000555358 CREG2Q8IUH2 290 aa26.18■■□□□ 1.78
STRN3-207ENST00000555358 EPHB6O15197 1021 aa26.17■■□□□ 1.78
STRN3-207ENST00000555358 ZNF572Q7Z3I7 529 aaPredicted RBP26.17■■□□□ 1.78
STRN3-207ENST00000555358 SMCR8Q8TEV9 937 aaPredicted RBP26.17■■□□□ 1.78
STRN3-207ENST00000555358 SELENOOQ9BVL4 669 aa26.17■■□□□ 1.78
STRN3-207ENST00000555358 CAPN6Q9Y6Q1 641 aa26.17■■□□□ 1.78
STRN3-207ENST00000555358 DOCK1Q14185 1865 aa26.17■■□□□ 1.78
STRN3-207ENST00000555358 TRIM66O15016 1216 aa26.16■■□□□ 1.78
STRN3-207ENST00000555358 SPA17Q15506 151 aa26.16■■□□□ 1.78
STRN3-207ENST00000555358 TRIM58Q8NG06 486 aa26.16■■□□□ 1.78
STRN3-207ENST00000555358 AFAP1L1Q8TED9 768 aa26.16■■□□□ 1.78
STRN3-207ENST00000555358 CHURC1Q8WUH1 139 aa26.16■■□□□ 1.78
STRN3-207ENST00000555358 GDAP1L1Q96MZ0 367 aa26.16■■□□□ 1.78
STRN3-207ENST00000555358 MTMR9Q96QG7 549 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms