RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 ADAM17P78536 824 aa13.52□□□□□ -0.25
VRK1-204ENST00000555351 AKAP17AQ02040 695 aaKnown RBP13.52□□□□□ -0.25
VRK1-204ENST00000555351 GPNMBQ14956 572 aa13.52□□□□□ -0.25
VRK1-204ENST00000555351 PKN1Q16512 942 aa13.52□□□□□ -0.25
VRK1-204ENST00000555351 TRAF7Q6Q0C0 670 aa13.52□□□□□ -0.25
VRK1-204ENST00000555351 RPAINQ86UA6 219 aa13.52□□□□□ -0.25
VRK1-204ENST00000555351 SLC17A8Q8NDX2 589 aa13.52□□□□□ -0.25
VRK1-204ENST00000555351 BICD2Q8TD16 824 aa13.52□□□□□ -0.25
VRK1-204ENST00000555351 CRYGNQ8WXF5 182 aa13.52□□□□□ -0.25
VRK1-204ENST00000555351 SMARCAD1Q9H4L7 1026 aa13.52□□□□□ -0.25
VRK1-204ENST00000555351 ERAP1Q9NZ08 941 aa13.52□□□□□ -0.25
VRK1-204ENST00000555351 DOCK5Q9H7D0 1870 aa13.52□□□□□ -0.25
VRK1-204ENST00000555351 TRIP12Q14669 1992 aaPredicted RBP13.51□□□□□ -0.25
VRK1-204ENST00000555351 GBF1Q92538 1859 aa13.51□□□□□ -0.25
VRK1-204ENST00000555351 GSTTP1A0A1W2PQM5 241 aa13.51□□□□□ -0.25
VRK1-204ENST00000555351 SORBS3O60504 671 aa13.51□□□□□ -0.25
VRK1-204ENST00000555351 LGR5O75473 907 aa13.51□□□□□ -0.25
VRK1-204ENST00000555351 FOSL2P15408 326 aa13.51□□□□□ -0.25
VRK1-204ENST00000555351 TOB2Q14106 344 aaPredicted RBP13.51□□□□□ -0.25
VRK1-204ENST00000555351 HIC1Q14526 733 aa13.51□□□□□ -0.25
VRK1-204ENST00000555351 GRIN2CQ14957 1233 aa13.51□□□□□ -0.25
VRK1-204ENST00000555351 ZNF618Q5T7W0 954 aa13.51□□□□□ -0.25
VRK1-204ENST00000555351 CCDC148Q8NFR7 591 aa13.51□□□□□ -0.25
VRK1-204ENST00000555351 MYLIPQ8WY64 445 aa13.51□□□□□ -0.25
VRK1-204ENST00000555351 SDF4Q9BRK5 362 aa13.51□□□□□ -0.25
VRK1-204ENST00000555351 JPH1Q9HDC5 661 aaPredicted RBP13.51□□□□□ -0.25
VRK1-204ENST00000555351 SLC9A2Q9UBY0 812 aa13.51□□□□□ -0.25
VRK1-204ENST00000555351 RSPH10B2B2RC85 870 aa13.5□□□□□ -0.25
VRK1-204ENST00000555351 KIF28PB7ZC32 967 aa13.5□□□□□ -0.25
VRK1-204ENST00000555351 NBNO60934 754 aa13.5□□□□□ -0.25
VRK1-204ENST00000555351 RSPH10BP0C881 870 aa13.5□□□□□ -0.25
VRK1-204ENST00000555351 KCNJ6P48051 423 aa13.5□□□□□ -0.25
VRK1-204ENST00000555351 SLC26A2P50443 739 aa13.5□□□□□ -0.25
VRK1-204ENST00000555351 ARHGAP4P98171 946 aa13.5□□□□□ -0.25
VRK1-204ENST00000555351 ZNF200P98182 395 aaPredicted RBP13.5□□□□□ -0.25
VRK1-204ENST00000555351 FAM26DQ5JW98 314 aa13.5□□□□□ -0.25
VRK1-204ENST00000555351 TAF2Q6P1X5 1199 aa13.5□□□□□ -0.25
VRK1-204ENST00000555351 FAM43BQ6ZT52 329 aaPredicted RBP13.5□□□□□ -0.25
VRK1-204ENST00000555351 HERC6Q8IVU3 1022 aa13.5□□□□□ -0.25
VRK1-204ENST00000555351 TRIM22Q8IYM9 498 aa13.5□□□□□ -0.25
VRK1-204ENST00000555351 REXO1Q8N1G1 1221 aaKnown RBP13.5□□□□□ -0.25
VRK1-204ENST00000555351 MAFAQ8NHW3 353 aaPredicted RBP13.5□□□□□ -0.25
VRK1-204ENST00000555351 WNT8BQ93098 351 aa13.5□□□□□ -0.25
VRK1-204ENST00000555351 IL17RAQ96F46 866 aa13.5□□□□□ -0.25
VRK1-204ENST00000555351 YBX2Q9Y2T7 364 aaKnown RBP13.5□□□□□ -0.25
VRK1-204ENST00000555351 COL6A3P12111 3177 aa13.49□□□□□ -0.25
VRK1-204ENST00000555351 MBLAC1A4D2B0 266 aaPredicted RBP13.49□□□□□ -0.25
VRK1-204ENST00000555351 RRN3P2A6NIE6 340 aa13.49□□□□□ -0.25
VRK1-204ENST00000555351 TREHO43280 583 aa13.49□□□□□ -0.25
VRK1-204ENST00000555351 ATG7O95352 703 aa13.49□□□□□ -0.25
VRK1-204ENST00000555351 ZNF76P36508 570 aa13.49□□□□□ -0.25
VRK1-204ENST00000555351 THPOP40225 353 aa13.49□□□□□ -0.25
VRK1-204ENST00000555351 WDR5P61964 334 aaKnown RBP13.49□□□□□ -0.25
VRK1-204ENST00000555351 SETQ01105 290 aaPredicted RBP13.49□□□□□ -0.25
VRK1-204ENST00000555351 IKBKEQ14164 716 aa13.49□□□□□ -0.25
VRK1-204ENST00000555351 UTP14CQ5TAP6 766 aaKnown RBP13.49□□□□□ -0.25
VRK1-204ENST00000555351 CPLX2Q6PUV4 134 aaKnown RBP13.49□□□□□ -0.25
VRK1-204ENST00000555351 PLPPR4Q7Z2D5 763 aa13.49□□□□□ -0.25
VRK1-204ENST00000555351 TRIM50Q86XT4 487 aa13.49□□□□□ -0.25
VRK1-204ENST00000555351 LMBR1Q8WVP7 490 aa13.49□□□□□ -0.25
VRK1-204ENST00000555351 GAS2L1Q99501 681 aaPredicted RBP13.49□□□□□ -0.25
VRK1-204ENST00000555351 C22orf23Q9BZE7 217 aa13.49□□□□□ -0.25
VRK1-204ENST00000555351 NKX2-4Q9H2Z4 354 aa13.49□□□□□ -0.25
VRK1-204ENST00000555351 AGO4Q9HCK5 861 aaKnown RBP13.49□□□□□ -0.25
VRK1-204ENST00000555351 SETD4Q9NVD3 440 aa13.49□□□□□ -0.25
VRK1-204ENST00000555351 IGLV3-22A0A075B6J6 115 aa13.48□□□□□ -0.25
VRK1-204ENST00000555351 IGKV6D-21A0A0A0MT36 114 aa13.48□□□□□ -0.25
VRK1-204ENST00000555351 ARP10275 920 aa13.48□□□□□ -0.25
VRK1-204ENST00000555351 CIITAP33076 1130 aa13.48□□□□□ -0.25
VRK1-204ENST00000555351 SP4Q02446 784 aa13.48□□□□□ -0.25
VRK1-204ENST00000555351 MBTPS1Q14703 1052 aa13.48□□□□□ -0.25
VRK1-204ENST00000555351 PLEKHG4Q58EX7 1191 aa13.48□□□□□ -0.25
VRK1-204ENST00000555351 PPP2R2DQ66LE6 453 aa13.48□□□□□ -0.25
VRK1-204ENST00000555351 GALNT17Q6IS24 598 aa13.48□□□□□ -0.25
VRK1-204ENST00000555351 RSPH3Q86UC2 560 aa13.48□□□□□ -0.25
VRK1-204ENST00000555351 CYP2W1Q8TAV3 490 aa13.48□□□□□ -0.25
VRK1-204ENST00000555351 GLG1Q92896 1179 aa13.48□□□□□ -0.25
VRK1-204ENST00000555351 PHKBQ93100 1093 aa13.48□□□□□ -0.25
VRK1-204ENST00000555351 SLC26A6Q9BXS9 759 aa13.48□□□□□ -0.25
VRK1-204ENST00000555351 AZI2Q9H6S1 392 aa13.48□□□□□ -0.25
VRK1-204ENST00000555351 TBC1D22BQ9NU19 505 aa13.48□□□□□ -0.25
VRK1-204ENST00000555351 TMEM260Q9NX78 707 aa13.48□□□□□ -0.25
VRK1-204ENST00000555351 TELO2Q9Y4R8 837 aa13.48□□□□□ -0.25
VRK1-204ENST00000555351 TET1Q8NFU7 2136 aa13.48□□□□□ -0.25
VRK1-204ENST00000555351 FAM86B1E9PN63 330 aa13.47□□□□□ -0.25
VRK1-204ENST00000555351 CPLX1O14810 134 aa13.47□□□□□ -0.25
VRK1-204ENST00000555351 DEXIO95424 95 aa13.47□□□□□ -0.25
VRK1-204ENST00000555351 FAM86B2P0C5J1 330 aa13.47□□□□□ -0.25
VRK1-204ENST00000555351 POU3F3P20264 500 aaPredicted RBP13.47□□□□□ -0.25
VRK1-204ENST00000555351 USP11P51784 963 aa13.47□□□□□ -0.25
VRK1-204ENST00000555351 RABGGTBP53611 331 aa13.47□□□□□ -0.25
VRK1-204ENST00000555351 ACTR2P61160 394 aa13.47□□□□□ -0.25
VRK1-204ENST00000555351 SSRP1Q08945 709 aaKnown RBP13.47□□□□□ -0.25
VRK1-204ENST00000555351 PPFIA1Q13136 1202 aa13.47□□□□□ -0.25
VRK1-204ENST00000555351 ITGB3BPQ13352 177 aaPredicted RBP13.47□□□□□ -0.25
VRK1-204ENST00000555351 MKRN4PQ13434 485 aaPredicted RBP13.47□□□□□ -0.25
VRK1-204ENST00000555351 JAKMIP3Q5VZ66 844 aa13.47□□□□□ -0.25
VRK1-204ENST00000555351 PLA2G4DQ86XP0 818 aa13.47□□□□□ -0.25
VRK1-204ENST00000555351 SEPT8Q92599 483 aa13.47□□□□□ -0.25
VRK1-204ENST00000555351 APBB2Q92870 758 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms