RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 CYP2C18P33260 490 aa13.73□□□□□ -0.21
SRP54-206ENST00000555317 KRT2P35908 639 aa13.73□□□□□ -0.21
SRP54-206ENST00000555317 HMGN5P82970 282 aaKnown RBP13.73□□□□□ -0.21
SRP54-206ENST00000555317 SAFBQ15424 915 aaKnown RBP eCLIP13.73□□□□□ -0.21
SRP54-206ENST00000555317 TRIM50Q86XT4 487 aa13.73□□□□□ -0.21
SRP54-206ENST00000555317 FAM184AQ8NB25 1140 aa13.73□□□□□ -0.21
SRP54-206ENST00000555317 CRYGNQ8WXF5 182 aa13.73□□□□□ -0.21
SRP54-206ENST00000555317 C16orf70Q9BSU1 422 aa13.73□□□□□ -0.21
SRP54-206ENST00000555317 SMARCAD1Q9H4L7 1026 aa13.73□□□□□ -0.21
SRP54-206ENST00000555317 TBC1D22BQ9NU19 505 aa13.73□□□□□ -0.21
SRP54-206ENST00000555317 ERAP1Q9NZ08 941 aa13.73□□□□□ -0.21
SRP54-206ENST00000555317 GTF2IRD1Q9UHL9 959 aa13.73□□□□□ -0.21
SRP54-206ENST00000555317 LAMA2P24043 3122 aaKnown RBP13.72□□□□□ -0.21
SRP54-206ENST00000555317 HAS3O00219 553 aa13.72□□□□□ -0.21
SRP54-206ENST00000555317 BACH1O14867 736 aa13.72□□□□□ -0.21
SRP54-206ENST00000555317 SMIM10L2AP0DMW4 78 aa13.72□□□□□ -0.21
SRP54-206ENST00000555317 SMIM10L2BP0DMW5 78 aa13.72□□□□□ -0.21
SRP54-206ENST00000555317 ITGB8P26012 769 aa13.72□□□□□ -0.21
SRP54-206ENST00000555317 CIITAP33076 1130 aa13.72□□□□□ -0.21
SRP54-206ENST00000555317 MCM2P49736 904 aa13.72□□□□□ -0.21
SRP54-206ENST00000555317 CCL23P55773 120 aa13.72□□□□□ -0.21
SRP54-206ENST00000555317 ACTR2P61160 394 aa13.72□□□□□ -0.21
SRP54-206ENST00000555317 ITGB3BPQ13352 177 aaPredicted RBP13.72□□□□□ -0.21
SRP54-206ENST00000555317 GDF6Q6KF10 455 aaPredicted RBP13.72□□□□□ -0.21
SRP54-206ENST00000555317 CAGE1Q8TC20 777 aa13.72□□□□□ -0.21
SRP54-206ENST00000555317 TNPO1Q92973 898 aaKnown RBP13.72□□□□□ -0.21
SRP54-206ENST00000555317 NAP1L4Q99733 375 aaKnown RBP13.72□□□□□ -0.21
SRP54-206ENST00000555317 KIF3AQ9Y496 699 aa13.72□□□□□ -0.21
SRP54-206ENST00000555317 EMSYQ7Z589 1322 aa13.71□□□□□ -0.21
SRP54-206ENST00000555317 MYH9P35579 1960 aaKnown RBP13.71□□□□□ -0.21
SRP54-206ENST00000555317 IGLV3-22A0A075B6J6 115 aa13.71□□□□□ -0.21
SRP54-206ENST00000555317 GSTTP1A0A1W2PQM5 241 aa13.71□□□□□ -0.21
SRP54-206ENST00000555317 PITPNM1O00562 1244 aa13.71□□□□□ -0.21
SRP54-206ENST00000555317 FDPSP14324 419 aaKnown RBP13.71□□□□□ -0.21
SRP54-206ENST00000555317 CSF2RAP15509 400 aa13.71□□□□□ -0.21
SRP54-206ENST00000555317 MARK3P27448 753 aa13.71□□□□□ -0.21
SRP54-206ENST00000555317 KRT76Q01546 638 aa13.71□□□□□ -0.21
SRP54-206ENST00000555317 GNL2Q13823 731 aaKnown RBP13.71□□□□□ -0.21
SRP54-206ENST00000555317 NPY5RQ15761 445 aa13.71□□□□□ -0.21
SRP54-206ENST00000555317 INF2Q27J81 1249 aa13.71□□□□□ -0.21
SRP54-206ENST00000555317 LETM2Q2VYF4 491 aa13.71□□□□□ -0.21
SRP54-206ENST00000555317 FAM160B1Q5W0V3 765 aa13.71□□□□□ -0.21
SRP54-206ENST00000555317 MIS18BP1Q6P0N0 1132 aa13.71□□□□□ -0.21
SRP54-206ENST00000555317 PSRC1Q6PGN9 363 aaPredicted RBP13.71□□□□□ -0.21
SRP54-206ENST00000555317 PIK3AP1Q6ZUJ8 805 aa13.71□□□□□ -0.21
SRP54-206ENST00000555317 RPUSD2Q8IZ73 545 aaKnown RBP13.71□□□□□ -0.21
SRP54-206ENST00000555317 ATP6V0A1Q93050 837 aa13.71□□□□□ -0.21
SRP54-206ENST00000555317 C8orf76Q96K31 380 aa13.71□□□□□ -0.21
SRP54-206ENST00000555317 RNPC3Q96LT9 517 aaKnown RBP13.71□□□□□ -0.21
SRP54-206ENST00000555317 UIMC1Q96RL1 719 aa13.71□□□□□ -0.21
SRP54-206ENST00000555317 BACH2Q9BYV9 841 aa13.71□□□□□ -0.21
SRP54-206ENST00000555317 GJB4Q9NTQ9 266 aa13.71□□□□□ -0.21
SRP54-206ENST00000555317 TRPC6Q9Y210 931 aa13.71□□□□□ -0.21
SRP54-206ENST00000555317 SAMM50Q9Y512 469 aa13.71□□□□□ -0.21
SRP54-206ENST00000555317 LAMA3Q16787 3333 aa13.71□□□□□ -0.21
SRP54-206ENST00000555317 UMODL1Q5DID0 1318 aa13.7□□□□□ -0.22
SRP54-206ENST00000555317 M0R2N6 131 aa13.7□□□□□ -0.22
SRP54-206ENST00000555317 MARCH6O60337 910 aa13.7□□□□□ -0.22
SRP54-206ENST00000555317 GAS7O60861 476 aa13.7□□□□□ -0.22
SRP54-206ENST00000555317 MMP1P03956 469 aa13.7□□□□□ -0.22
SRP54-206ENST00000555317 PPFIA1Q13136 1202 aa13.7□□□□□ -0.22
SRP54-206ENST00000555317 PTK7Q13308 1070 aa13.7□□□□□ -0.22
SRP54-206ENST00000555317 MOXD1Q6UVY6 613 aa13.7□□□□□ -0.22
SRP54-206ENST00000555317 NEK8Q86SG6 692 aa13.7□□□□□ -0.22
SRP54-206ENST00000555317 SMAP1Q8IYB5 467 aaPredicted RBP13.7□□□□□ -0.22
SRP54-206ENST00000555317 MTIF3Q9H2K0 278 aaKnown RBP13.7□□□□□ -0.22
SRP54-206ENST00000555317 IL23AQ9NPF7 189 aa13.7□□□□□ -0.22
SRP54-206ENST00000555317 DDX25Q9UHL0 483 aaKnown RBP13.7□□□□□ -0.22
SRP54-206ENST00000555317 TELO2Q9Y4R8 837 aa13.7□□□□□ -0.22
SRP54-206ENST00000555317 TANC1Q9C0D5 1861 aa13.7□□□□□ -0.22
SRP54-206ENST00000555317 NRCAMQ92823 1304 aa13.69□□□□□ -0.22
SRP54-206ENST00000555317 MSH4O15457 936 aa13.69□□□□□ -0.22
SRP54-206ENST00000555317 CCNT1O60563 726 aaKnown RBP13.69□□□□□ -0.22
SRP54-206ENST00000555317 LGR5O75473 907 aa13.69□□□□□ -0.22
SRP54-206ENST00000555317 TDP2O95551 362 aa13.69□□□□□ -0.22
SRP54-206ENST00000555317 PSAPP07602 524 aa13.69□□□□□ -0.22
SRP54-206ENST00000555317 GCFC2P16383 781 aaKnown RBP13.69□□□□□ -0.22
SRP54-206ENST00000555317 RFC2P35250 354 aa13.69□□□□□ -0.22
SRP54-206ENST00000555317 STAT5BP51692 787 aa13.69□□□□□ -0.22
SRP54-206ENST00000555317 ST3GAL1Q11201 340 aa13.69□□□□□ -0.22
SRP54-206ENST00000555317 Q4G0T1 1027 aa13.69□□□□□ -0.22
SRP54-206ENST00000555317 LRCH2Q5VUJ6 765 aa13.69□□□□□ -0.22
SRP54-206ENST00000555317 KRT40Q6A162 431 aa13.69□□□□□ -0.22
SRP54-206ENST00000555317 ZNF746Q6NUN9 644 aaPredicted RBP13.69□□□□□ -0.22
SRP54-206ENST00000555317 DIS3L2Q8IYB7 885 aaKnown RBP13.69□□□□□ -0.22
SRP54-206ENST00000555317 OXER1Q8TDS5 423 aa13.69□□□□□ -0.22
SRP54-206ENST00000555317 AFAP1L1Q8TED9 768 aa13.69□□□□□ -0.22
SRP54-206ENST00000555317 SCLYQ96I15 445 aa13.69□□□□□ -0.22
SRP54-206ENST00000555317 TEKT3Q9BXF9 490 aa13.69□□□□□ -0.22
SRP54-206ENST00000555317 WNT8AQ9H1J5 351 aa13.69□□□□□ -0.22
SRP54-206ENST00000555317 SETD4Q9NVD3 440 aa13.69□□□□□ -0.22
SRP54-206ENST00000555317 CYP3A7-CYP3A51PA0A087WV96 503 aa13.68□□□□□ -0.22
SRP54-206ENST00000555317 WDR64B1ANS9 1081 aa13.68□□□□□ -0.22
SRP54-206ENST00000555317 CHMP2AO43633 222 aa13.68□□□□□ -0.22
SRP54-206ENST00000555317 CCNE2O96020 404 aa13.68□□□□□ -0.22
SRP54-206ENST00000555317 PFKMP08237 780 aa13.68□□□□□ -0.22
SRP54-206ENST00000555317 ACRP10323 421 aa13.68□□□□□ -0.22
SRP54-206ENST00000555317 SELPP16109 830 aa13.68□□□□□ -0.22
SRP54-206ENST00000555317 CYP3A7P24462 503 aa13.68□□□□□ -0.22
SRP54-206ENST00000555317 SLC26A2P50443 739 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms