RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 LRWD1Q9UFC0 647 aa11.49□□□□□ -0.57
SYNE2-215ENST00000554997 PCDHA7Q9UN72 937 aa11.49□□□□□ -0.57
SYNE2-215ENST00000554997 PCDHA10Q9Y5I2 948 aa11.49□□□□□ -0.57
SYNE2-215ENST00000554997 STK24Q9Y6E0 443 aa11.49□□□□□ -0.57
SYNE2-215ENST00000554997 PLXNA1Q9UIW2 1896 aa11.49□□□□□ -0.57
SYNE2-215ENST00000554997 IGKV6D-21A0A0A0MT36 114 aa11.48□□□□□ -0.57
SYNE2-215ENST00000554997 GSTTP1A0A1W2PQM5 241 aa11.48□□□□□ -0.57
SYNE2-215ENST00000554997 VWA3AA6NCI4 1184 aa11.48□□□□□ -0.57
SYNE2-215ENST00000554997 DDX39AO00148 427 aaKnown RBP11.48□□□□□ -0.57
SYNE2-215ENST00000554997 CUTAO60888 179 aa11.48□□□□□ -0.57
SYNE2-215ENST00000554997 CAPN2P17655 700 aa11.48□□□□□ -0.57
SYNE2-215ENST00000554997 JAK3P52333 1124 aa11.48□□□□□ -0.57
SYNE2-215ENST00000554997 EPHA7Q15375 998 aa11.48□□□□□ -0.57
SYNE2-215ENST00000554997 CSPP1Q1MSJ5 1256 aa11.48□□□□□ -0.57
SYNE2-215ENST00000554997 BRDTQ58F21 947 aaPredicted RBP11.48□□□□□ -0.57
SYNE2-215ENST00000554997 TLK2Q86UE8 772 aa11.48□□□□□ -0.57
SYNE2-215ENST00000554997 TNS4Q8IZW8 715 aa11.48□□□□□ -0.57
SYNE2-215ENST00000554997 AFG1LQ8WV93 481 aa11.48□□□□□ -0.57
SYNE2-215ENST00000554997 GPR20Q99678 358 aa11.48□□□□□ -0.57
SYNE2-215ENST00000554997 HSD17B14Q9BPX1 270 aa11.48□□□□□ -0.57
SYNE2-215ENST00000554997 XPNPEP3Q9NQH7 507 aa11.48□□□□□ -0.57
SYNE2-215ENST00000554997 DISC1Q9NRI5 854 aa11.48□□□□□ -0.57
SYNE2-215ENST00000554997 TCEAL9Q9UHQ7 104 aa11.48□□□□□ -0.57
SYNE2-215ENST00000554997 MYH7BA7E2Y1 1941 aa11.47□□□□□ -0.57
SYNE2-215ENST00000554997 ELP1O95163 1332 aa11.47□□□□□ -0.57
SYNE2-215ENST00000554997 WDR64B1ANS9 1081 aa11.47□□□□□ -0.57
SYNE2-215ENST00000554997 EML1O00423 815 aa11.47□□□□□ -0.57
SYNE2-215ENST00000554997 NOP56O00567 594 aaKnown RBP11.47□□□□□ -0.57
SYNE2-215ENST00000554997 CTAGE5O15320 804 aa11.47□□□□□ -0.57
SYNE2-215ENST00000554997 SORBS3O60504 671 aa11.47□□□□□ -0.57
SYNE2-215ENST00000554997 KPNA6O60684 536 aa11.47□□□□□ -0.57
SYNE2-215ENST00000554997 SLITRK3O94933 977 aa11.47□□□□□ -0.57
SYNE2-215ENST00000554997 PSAPP07602 524 aa11.47□□□□□ -0.57
SYNE2-215ENST00000554997 GJB1P08034 283 aa11.47□□□□□ -0.57
SYNE2-215ENST00000554997 HOXD8P13378 290 aaPredicted RBP11.47□□□□□ -0.57
SYNE2-215ENST00000554997 PTGS1P23219 599 aa11.47□□□□□ -0.57
SYNE2-215ENST00000554997 ME1P48163 572 aa11.47□□□□□ -0.57
SYNE2-215ENST00000554997 CPT1AP50416 773 aa11.47□□□□□ -0.57
SYNE2-215ENST00000554997 GRIN1Q05586 938 aa11.47□□□□□ -0.57
SYNE2-215ENST00000554997 DGKDQ16760 1214 aa11.47□□□□□ -0.57
SYNE2-215ENST00000554997 GNASQ5JWF2 1037 aa11.47□□□□□ -0.57
SYNE2-215ENST00000554997 AXDND1Q5T1B0 1012 aaPredicted RBP11.47□□□□□ -0.57
SYNE2-215ENST00000554997 ADALQ6DHV7 355 aa11.47□□□□□ -0.57
SYNE2-215ENST00000554997 SWSAP1Q6NVH7 229 aa11.47□□□□□ -0.57
SYNE2-215ENST00000554997 MIS18BP1Q6P0N0 1132 aa11.47□□□□□ -0.57
SYNE2-215ENST00000554997 MIER3Q7Z3K6 550 aa11.47□□□□□ -0.57
SYNE2-215ENST00000554997 ARRDC4Q8NCT1 418 aa11.47□□□□□ -0.57
SYNE2-215ENST00000554997 KLHDC9Q8NEP7 349 aa11.47□□□□□ -0.57
SYNE2-215ENST00000554997 ERMNQ8TAM6 284 aa11.47□□□□□ -0.57
SYNE2-215ENST00000554997 CLIC6Q96NY7 704 aa11.47□□□□□ -0.57
SYNE2-215ENST00000554997 CSRNP2Q9H175 543 aa11.47□□□□□ -0.57
SYNE2-215ENST00000554997 TELO2Q9Y4R8 837 aa11.47□□□□□ -0.57
SYNE2-215ENST00000554997 SAMM50Q9Y512 469 aa11.47□□□□□ -0.57
SYNE2-215ENST00000554997 SYNRGQ9UMZ2 1314 aa11.46□□□□□ -0.57
SYNE2-215ENST00000554997 SLC26A4O43511 780 aa11.46□□□□□ -0.57
SYNE2-215ENST00000554997 CHMP2AO43633 222 aa11.46□□□□□ -0.57
SYNE2-215ENST00000554997 ZEB2O60315 1214 aa11.46□□□□□ -0.57
SYNE2-215ENST00000554997 ADAMTS4O75173 837 aa11.46□□□□□ -0.57
SYNE2-215ENST00000554997 LGR5O75473 907 aa11.46□□□□□ -0.57
SYNE2-215ENST00000554997 SGPL1O95470 568 aa11.46□□□□□ -0.57
SYNE2-215ENST00000554997 PGK1P00558 417 aa11.46□□□□□ -0.57
SYNE2-215ENST00000554997 MYCP01106 439 aaPredicted RBP11.46□□□□□ -0.57
SYNE2-215ENST00000554997 P4HBP07237 508 aaKnown RBP11.46□□□□□ -0.57
SYNE2-215ENST00000554997 MMP3P08254 477 aa11.46□□□□□ -0.57
SYNE2-215ENST00000554997 C6orf222P0C671 652 aaPredicted RBP11.46□□□□□ -0.57
SYNE2-215ENST00000554997 SUPT20HL2P0C7V6 817 aa11.46□□□□□ -0.57
SYNE2-215ENST00000554997 CST5P28325 142 aaPredicted RBP11.46□□□□□ -0.57
SYNE2-215ENST00000554997 TCF7P36402 384 aaPredicted RBP11.46□□□□□ -0.57
SYNE2-215ENST00000554997 SP4Q02446 784 aa11.46□□□□□ -0.57
SYNE2-215ENST00000554997 FSCN1Q16658 493 aaKnown RBP11.46□□□□□ -0.57
SYNE2-215ENST00000554997 KRT79Q5XKE5 535 aa11.46□□□□□ -0.57
SYNE2-215ENST00000554997 NCAPH2Q6IBW4 605 aa11.46□□□□□ -0.57
SYNE2-215ENST00000554997 CCSAPQ6IQ19 270 aaPredicted RBP11.46□□□□□ -0.57
SYNE2-215ENST00000554997 PLPPR4Q7Z2D5 763 aa11.46□□□□□ -0.57
SYNE2-215ENST00000554997 RNF180Q86T96 592 aa11.46□□□□□ -0.57
SYNE2-215ENST00000554997 KCTD17Q8N5Z5 321 aa11.46□□□□□ -0.57
SYNE2-215ENST00000554997 PCSK9Q8NBP7 692 aaKnown RBP11.46□□□□□ -0.57
SYNE2-215ENST00000554997 LENG1Q96BZ8 264 aaPredicted RBP11.46□□□□□ -0.57
SYNE2-215ENST00000554997 DEFB118Q96PH6 123 aa11.46□□□□□ -0.57
SYNE2-215ENST00000554997 GBP4Q96PP9 640 aa11.46□□□□□ -0.57
SYNE2-215ENST00000554997 EIF2AK1Q9BQI3 630 aaKnown RBP11.46□□□□□ -0.57
SYNE2-215ENST00000554997 TSEN34Q9BSV6 310 aaKnown RBP11.46□□□□□ -0.57
SYNE2-215ENST00000554997 POLR3CQ9BUI4 534 aaPredicted RBP11.46□□□□□ -0.57
SYNE2-215ENST00000554997 GDPD2Q9HCC8 539 aa11.46□□□□□ -0.57
SYNE2-215ENST00000554997 OGDHLQ9ULD0 1010 aa11.46□□□□□ -0.57
SYNE2-215ENST00000554997 MAFBQ9Y5Q3 323 aaPredicted RBP11.46□□□□□ -0.57
SYNE2-215ENST00000554997 A0A1W2PQ27 194 aa11.45□□□□□ -0.58
SYNE2-215ENST00000554997 A0A1W2PQ64 194 aa11.45□□□□□ -0.58
SYNE2-215ENST00000554997 A0A1W2PQD8 194 aa11.45□□□□□ -0.58
SYNE2-215ENST00000554997 POTEMA6NI47 508 aa11.45□□□□□ -0.58
SYNE2-215ENST00000554997 TFRCP02786 760 aaKnown RBP11.45□□□□□ -0.58
SYNE2-215ENST00000554997 SPATA31C1P0DKV0 1188 aa11.45□□□□□ -0.58
SYNE2-215ENST00000554997 XRCC6P12956 609 aaKnown RBP eCLIP11.45□□□□□ -0.58
SYNE2-215ENST00000554997 MUTP22033 750 aa11.45□□□□□ -0.58
SYNE2-215ENST00000554997 CMA1P23946 247 aa11.45□□□□□ -0.58
SYNE2-215ENST00000554997 RPA1P27694 616 aa11.45□□□□□ -0.58
SYNE2-215ENST00000554997 CDC25AP30304 524 aa11.45□□□□□ -0.58
SYNE2-215ENST00000554997 UBA7P41226 1012 aa11.45□□□□□ -0.58
SYNE2-215ENST00000554997 QARSP47897 775 aaKnown RBP11.45□□□□□ -0.58
SYNE2-215ENST00000554997 SLC26A2P50443 739 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms