RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 AFG1LQ8WV93 481 aa18.52■□□□□ 0.56
SPTLC2-203ENST00000554901 TNPO1Q92973 898 aaKnown RBP18.52■□□□□ 0.56
SPTLC2-203ENST00000554901 GJA10Q969M2 543 aa18.52■□□□□ 0.56
SPTLC2-203ENST00000554901 LENG1Q96BZ8 264 aaPredicted RBP18.52■□□□□ 0.56
SPTLC2-203ENST00000554901 AK8Q96MA6 479 aa18.52■□□□□ 0.56
SPTLC2-203ENST00000554901 DEFB118Q96PH6 123 aa18.52■□□□□ 0.56
SPTLC2-203ENST00000554901 TMEM106CQ9BVX2 250 aa18.52■□□□□ 0.56
SPTLC2-203ENST00000554901 UNC45AQ9H3U1 944 aa18.52■□□□□ 0.56
SPTLC2-203ENST00000554901 BCAS3Q9H6U6 928 aa18.52■□□□□ 0.56
SPTLC2-203ENST00000554901 OGDHLQ9ULD0 1010 aa18.52■□□□□ 0.56
SPTLC2-203ENST00000554901 PCDHA10Q9Y5I2 948 aa18.52■□□□□ 0.56
SPTLC2-203ENST00000554901 POTEFA5A3E0 1075 aa18.51■□□□□ 0.55
SPTLC2-203ENST00000554901 DDX39AO00148 427 aaKnown RBP18.51■□□□□ 0.55
SPTLC2-203ENST00000554901 CCNE2O96020 404 aa18.51■□□□□ 0.55
SPTLC2-203ENST00000554901 C6orf222P0C671 652 aaPredicted RBP18.51■□□□□ 0.55
SPTLC2-203ENST00000554901 LONP1P36776 959 aaKnown RBP18.51■□□□□ 0.55
SPTLC2-203ENST00000554901 DGKDQ16760 1214 aa18.51■□□□□ 0.55
SPTLC2-203ENST00000554901 MIS18BP1Q6P0N0 1132 aa18.51■□□□□ 0.55
SPTLC2-203ENST00000554901 CLEC17AQ6ZS10 378 aa18.51■□□□□ 0.55
SPTLC2-203ENST00000554901 KRI1Q8N9T8 703 aaKnown RBP18.51■□□□□ 0.55
SPTLC2-203ENST00000554901 PCSK9Q8NBP7 692 aaKnown RBP18.51■□□□□ 0.55
SPTLC2-203ENST00000554901 SPATA32Q96LK8 384 aa18.51■□□□□ 0.55
SPTLC2-203ENST00000554901 TSEN34Q9BSV6 310 aaKnown RBP18.51■□□□□ 0.55
SPTLC2-203ENST00000554901 CRISPLD2Q9H0B8 497 aa18.51■□□□□ 0.55
SPTLC2-203ENST00000554901 DISC1Q9NRI5 854 aa18.51■□□□□ 0.55
SPTLC2-203ENST00000554901 CTAGE5O15320 804 aa18.5■□□□□ 0.55
SPTLC2-203ENST00000554901 SGPL1O95470 568 aa18.5■□□□□ 0.55
SPTLC2-203ENST00000554901 PGK1P00558 417 aa18.5■□□□□ 0.55
SPTLC2-203ENST00000554901 MMP3P08254 477 aa18.5■□□□□ 0.55
SPTLC2-203ENST00000554901 TECP42680 631 aa18.5■□□□□ 0.55
SPTLC2-203ENST00000554901 GJA8P48165 433 aa18.5■□□□□ 0.55
SPTLC2-203ENST00000554901 CSPP1Q1MSJ5 1256 aa18.5■□□□□ 0.55
SPTLC2-203ENST00000554901 ABHD15Q6UXT9 468 aa18.5■□□□□ 0.55
SPTLC2-203ENST00000554901 MIER3Q7Z3K6 550 aa18.5■□□□□ 0.55
SPTLC2-203ENST00000554901 NEK9Q8TD19 979 aa18.5■□□□□ 0.55
SPTLC2-203ENST00000554901 LEO1Q8WVC0 666 aaPredicted RBP18.5■□□□□ 0.55
SPTLC2-203ENST00000554901 UIMC1Q96RL1 719 aa18.5■□□□□ 0.55
SPTLC2-203ENST00000554901 FBXO2Q9UK22 296 aaPredicted RBP18.5■□□□□ 0.55
SPTLC2-203ENST00000554901 CENPFP49454 3210 aa18.5■□□□□ 0.55
SPTLC2-203ENST00000554901 EMSYQ7Z589 1322 aa18.5■□□□□ 0.55
SPTLC2-203ENST00000554901 IGKV6D-21A0A0A0MT36 114 aa18.49■□□□□ 0.55
SPTLC2-203ENST00000554901 GSTTP1A0A1W2PQM5 241 aa18.49■□□□□ 0.55
SPTLC2-203ENST00000554901 VWA3AA6NCI4 1184 aa18.49■□□□□ 0.55
SPTLC2-203ENST00000554901 PSAPP07602 524 aa18.49■□□□□ 0.55
SPTLC2-203ENST00000554901 TCF7P36402 384 aaPredicted RBP18.49■□□□□ 0.55
SPTLC2-203ENST00000554901 LRRC41Q15345 812 aa18.49■□□□□ 0.55
SPTLC2-203ENST00000554901 EPHA7Q15375 998 aa18.49■□□□□ 0.55
SPTLC2-203ENST00000554901 GNASQ5JWF2 1037 aa18.49■□□□□ 0.55
SPTLC2-203ENST00000554901 ERMNQ8TAM6 284 aa18.49■□□□□ 0.55
SPTLC2-203ENST00000554901 U2AF1L4Q8WU68 220 aaKnown RBP18.49■□□□□ 0.55
SPTLC2-203ENST00000554901 LRWD1Q9UFC0 647 aa18.49■□□□□ 0.55
SPTLC2-203ENST00000554901 SAMM50Q9Y512 469 aa18.49■□□□□ 0.55
SPTLC2-203ENST00000554901 MOXD2PA6NHM9 499 aa18.49■□□□□ 0.55
SPTLC2-203ENST00000554901 SLC26A4O43511 780 aa18.49■□□□□ 0.55
SPTLC2-203ENST00000554901 CHMP2AO43633 222 aa18.49■□□□□ 0.55
SPTLC2-203ENST00000554901 SORBS3O60504 671 aa18.49■□□□□ 0.55
SPTLC2-203ENST00000554901 LGR5O75473 907 aa18.49■□□□□ 0.55
SPTLC2-203ENST00000554901 MYCP01106 439 aaPredicted RBP18.49■□□□□ 0.55
SPTLC2-203ENST00000554901 SUPT20HL2P0C7V6 817 aa18.49■□□□□ 0.55
SPTLC2-203ENST00000554901 MARCKSP29966 332 aaPredicted RBP18.49■□□□□ 0.55
SPTLC2-203ENST00000554901 SLC26A2P50443 739 aa18.49■□□□□ 0.55
SPTLC2-203ENST00000554901 SP4Q02446 784 aa18.49■□□□□ 0.55
SPTLC2-203ENST00000554901 IL17AQ16552 155 aa18.49■□□□□ 0.55
SPTLC2-203ENST00000554901 COL13A1Q5TAT6 717 aaPredicted RBP18.49■□□□□ 0.55
SPTLC2-203ENST00000554901 NCAPH2Q6IBW4 605 aa18.49■□□□□ 0.55
SPTLC2-203ENST00000554901 CCSAPQ6IQ19 270 aaPredicted RBP18.49■□□□□ 0.55
SPTLC2-203ENST00000554901 ZNF579Q8NAF0 562 aaKnown RBP18.49■□□□□ 0.55
SPTLC2-203ENST00000554901 ANKLE1Q8NAG6 615 aa18.49■□□□□ 0.55
SPTLC2-203ENST00000554901 AFAP1L1Q8TED9 768 aa18.49■□□□□ 0.55
SPTLC2-203ENST00000554901 POTEMA6NI47 508 aa18.48■□□□□ 0.55
SPTLC2-203ENST00000554901 DNM1LO00429 736 aa18.48■□□□□ 0.55
SPTLC2-203ENST00000554901 DKC1O60832 514 aaKnown RBP eCLIP18.48■□□□□ 0.55
SPTLC2-203ENST00000554901 CUTAO60888 179 aa18.48■□□□□ 0.55
SPTLC2-203ENST00000554901 CABYRO75952 493 aa18.48■□□□□ 0.55
SPTLC2-203ENST00000554901 MUTP22033 750 aa18.48■□□□□ 0.55
SPTLC2-203ENST00000554901 PTGS1P23219 599 aa18.48■□□□□ 0.55
SPTLC2-203ENST00000554901 FAM160B1Q5W0V3 765 aa18.48■□□□□ 0.55
SPTLC2-203ENST00000554901 HAUS3Q68CZ6 603 aa18.48■□□□□ 0.55
SPTLC2-203ENST00000554901 PLPPR4Q7Z2D5 763 aa18.48■□□□□ 0.55
SPTLC2-203ENST00000554901 SMARCAD1Q9H4L7 1026 aa18.48■□□□□ 0.55
SPTLC2-203ENST00000554901 AZI2Q9H6S1 392 aa18.48■□□□□ 0.55
SPTLC2-203ENST00000554901 KBTBD13C9JR72 458 aa18.47■□□□□ 0.55
SPTLC2-203ENST00000554901 EML1O00423 815 aa18.47■□□□□ 0.55
SPTLC2-203ENST00000554901 P4HBP07237 508 aaKnown RBP18.47■□□□□ 0.55
SPTLC2-203ENST00000554901 ME1P48163 572 aa18.47■□□□□ 0.55
SPTLC2-203ENST00000554901 KCTD17Q8N5Z5 321 aa18.47■□□□□ 0.55
SPTLC2-203ENST00000554901 ATP6V0A1Q93050 837 aa18.47■□□□□ 0.55
SPTLC2-203ENST00000554901 HSD17B14Q9BPX1 270 aa18.47■□□□□ 0.55
SPTLC2-203ENST00000554901 ZNF215Q9UL58 517 aaPredicted RBP18.47■□□□□ 0.55
SPTLC2-203ENST00000554901 FRMPD3Q5JV73 1810 aa18.46■□□□□ 0.55
SPTLC2-203ENST00000554901 MYADML2A6NDP7 307 aa18.46■□□□□ 0.55
SPTLC2-203ENST00000554901 TFRCP02786 760 aaKnown RBP18.46■□□□□ 0.55
SPTLC2-203ENST00000554901 LGALS2P05162 132 aa18.46■□□□□ 0.55
SPTLC2-203ENST00000554901 PURAQ00577 322 aaKnown RBP18.46■□□□□ 0.55
SPTLC2-203ENST00000554901 BEX3Q00994 111 aa18.46■□□□□ 0.55
SPTLC2-203ENST00000554901 KCNA10Q16322 511 aa18.46■□□□□ 0.55
SPTLC2-203ENST00000554901 KRT79Q5XKE5 535 aa18.46■□□□□ 0.55
SPTLC2-203ENST00000554901 CHAMP1Q96JM3 812 aa18.46■□□□□ 0.55
SPTLC2-203ENST00000554901 GBP4Q96PP9 640 aa18.46■□□□□ 0.55
SPTLC2-203ENST00000554901 EIF2AK1Q9BQI3 630 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms