RNA–Protein interactions for RNA: ENST00000554844.1

TMEM253-204, Transcript of transmembrane protein 253, humanhuman

TSL 4

Gene TMEM253, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-204ENST00000554844 RALGAPA2Q2PPJ7 1873 aa11.15□□□□□ -0.62
TMEM253-204ENST00000554844 NLRC5Q86WI3 1866 aa11.15□□□□□ -0.62
TMEM253-204ENST00000554844 PNMA6FA0A0J9YX94 578 aa11.15□□□□□ -0.62
TMEM253-204ENST00000554844 OPLAHO14841 1288 aa11.15□□□□□ -0.62
TMEM253-204ENST00000554844 IFIT3O14879 490 aaKnown RBP11.15□□□□□ -0.62
TMEM253-204ENST00000554844 RB1P06400 928 aa11.15□□□□□ -0.62
TMEM253-204ENST00000554844 SP2Q02086 613 aa11.15□□□□□ -0.62
TMEM253-204ENST00000554844 SP4Q02446 784 aa11.15□□□□□ -0.62
TMEM253-204ENST00000554844 HIC1Q14526 733 aa11.15□□□□□ -0.62
TMEM253-204ENST00000554844 GRM4Q14833 912 aa11.15□□□□□ -0.62
TMEM253-204ENST00000554844 RPAINQ86UA6 219 aa11.15□□□□□ -0.62
TMEM253-204ENST00000554844 NLRX1Q86UT6 975 aa11.15□□□□□ -0.62
TMEM253-204ENST00000554844 GIMAP8Q8ND71 665 aaPredicted RBP11.15□□□□□ -0.62
TMEM253-204ENST00000554844 MTMR8Q96EF0 704 aa11.15□□□□□ -0.62
TMEM253-204ENST00000554844 ZFP91Q96JP5 570 aaPredicted RBP11.15□□□□□ -0.62
TMEM253-204ENST00000554844 PIGSQ96S52 555 aa11.15□□□□□ -0.62
TMEM253-204ENST00000554844 KCNH6Q9H252 994 aa11.15□□□□□ -0.62
TMEM253-204ENST00000554844 SETD4Q9NVD3 440 aa11.15□□□□□ -0.62
TMEM253-204ENST00000554844 COL4A6Q14031 1691 aa11.14□□□□□ -0.63
TMEM253-204ENST00000554844 NRCAMQ92823 1304 aa11.14□□□□□ -0.63
TMEM253-204ENST00000554844 PALM3A6NDB9 673 aaPredicted RBP11.14□□□□□ -0.63
TMEM253-204ENST00000554844 PPP1R11O60927 126 aaPredicted RBP11.14□□□□□ -0.63
TMEM253-204ENST00000554844 HOXC8P31273 242 aa11.14□□□□□ -0.63
TMEM253-204ENST00000554844 ICAM3P32942 547 aa11.14□□□□□ -0.63
TMEM253-204ENST00000554844 WTAPQ15007 396 aa11.14□□□□□ -0.63
TMEM253-204ENST00000554844 TAF2Q6P1X5 1199 aa11.14□□□□□ -0.63
TMEM253-204ENST00000554844 CATIPQ7Z7H3 387 aa11.14□□□□□ -0.63
TMEM253-204ENST00000554844 PLEKHM2Q8IWE5 1019 aa11.14□□□□□ -0.63
TMEM253-204ENST00000554844 ADHFE1Q8IWW8 467 aa11.14□□□□□ -0.63
TMEM253-204ENST00000554844 PIP4P2Q8N4L2 257 aa11.14□□□□□ -0.63
TMEM253-204ENST00000554844 GPKOWQ92917 476 aaPredicted RBP eCLIP11.14□□□□□ -0.63
TMEM253-204ENST00000554844 MFSD14AQ96MC6 490 aa11.14□□□□□ -0.63
TMEM253-204ENST00000554844 GPR20Q99678 358 aa11.14□□□□□ -0.63
TMEM253-204ENST00000554844 OSBPL3Q9H4L5 887 aa11.14□□□□□ -0.63
TMEM253-204ENST00000554844 RTEL1Q9NZ71 1219 aa11.14□□□□□ -0.63
TMEM253-204ENST00000554844 SEC63Q9UGP8 760 aaKnown RBP11.14□□□□□ -0.63
TMEM253-204ENST00000554844 ADGRA3Q8IWK6 1321 aa11.13□□□□□ -0.63
TMEM253-204ENST00000554844 KAT6AQ92794 2004 aa11.13□□□□□ -0.63
TMEM253-204ENST00000554844 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.13□□□□□ -0.63
TMEM253-204ENST00000554844 SPATA31C2B4DYI2 1134 aa11.13□□□□□ -0.63
TMEM253-204ENST00000554844 M0QZ92 97 aa11.13□□□□□ -0.63
TMEM253-204ENST00000554844 STK25O00506 426 aa11.13□□□□□ -0.63
TMEM253-204ENST00000554844 CSPG5O95196 566 aa11.13□□□□□ -0.63
TMEM253-204ENST00000554844 RPLP2P05387 115 aaKnown RBP11.13□□□□□ -0.63
TMEM253-204ENST00000554844 GHRP10912 638 aa11.13□□□□□ -0.63
TMEM253-204ENST00000554844 BMPR1AP36894 532 aa11.13□□□□□ -0.63
TMEM253-204ENST00000554844 ZP2Q05996 745 aa11.13□□□□□ -0.63
TMEM253-204ENST00000554844 PPFIA1Q13136 1202 aa11.13□□□□□ -0.63
TMEM253-204ENST00000554844 BTG3Q14201 252 aaPredicted RBP11.13□□□□□ -0.63
TMEM253-204ENST00000554844 SEC23AQ15436 765 aa11.13□□□□□ -0.63
TMEM253-204ENST00000554844 FAM26DQ5JW98 314 aa11.13□□□□□ -0.63
TMEM253-204ENST00000554844 XRRA1Q6P2D8 792 aa11.13□□□□□ -0.63
TMEM253-204ENST00000554844 TRIM50Q86XT4 487 aa11.13□□□□□ -0.63
TMEM253-204ENST00000554844 LMBR1Q8WVP7 490 aa11.13□□□□□ -0.63
TMEM253-204ENST00000554844 RUFY2Q8WXA3 655 aa11.13□□□□□ -0.63
TMEM253-204ENST00000554844 PIBF1Q8WXW3 757 aa11.13□□□□□ -0.63
TMEM253-204ENST00000554844 TNPO1Q92973 898 aaKnown RBP11.13□□□□□ -0.63
TMEM253-204ENST00000554844 RRP36Q96EU6 259 aaKnown RBP11.13□□□□□ -0.63
TMEM253-204ENST00000554844 CDHR1Q96JP9 859 aa11.13□□□□□ -0.63
TMEM253-204ENST00000554844 INPP4AQ96PE3 977 aaPredicted RBP11.13□□□□□ -0.63
TMEM253-204ENST00000554844 RIOX1Q9H6W3 641 aa11.13□□□□□ -0.63
TMEM253-204ENST00000554844 C5orf67F2Z3F1 127 aa11.12□□□□□ -0.63
TMEM253-204ENST00000554844 KIF5BP33176 963 aa11.12□□□□□ -0.63
TMEM253-204ENST00000554844 NDUFV1P49821 464 aa11.12□□□□□ -0.63
TMEM253-204ENST00000554844 CLUL1Q15846 466 aa11.12□□□□□ -0.63
TMEM253-204ENST00000554844 PCNX4Q63HM2 1172 aa11.12□□□□□ -0.63
TMEM253-204ENST00000554844 CYB5R4Q7L1T6 521 aa11.12□□□□□ -0.63
TMEM253-204ENST00000554844 SMC5Q8IY18 1101 aa11.12□□□□□ -0.63
TMEM253-204ENST00000554844 CTCFLQ8NI51 663 aaPredicted RBP11.12□□□□□ -0.63
TMEM253-204ENST00000554844 GLG1Q92896 1179 aa11.12□□□□□ -0.63
TMEM253-204ENST00000554844 SENP7Q9BQF6 1050 aa11.12□□□□□ -0.63
TMEM253-204ENST00000554844 IGFLR1Q9H665 355 aa11.12□□□□□ -0.63
TMEM253-204ENST00000554844 FRMPD4Q14CM0 1322 aa11.11□□□□□ -0.63
TMEM253-204ENST00000554844 STAG3L1P0CL83 205 aa11.11□□□□□ -0.63
TMEM253-204ENST00000554844 TCF7P36402 384 aaPredicted RBP11.11□□□□□ -0.63
TMEM253-204ENST00000554844 MRE11P49959 708 aa11.11□□□□□ -0.63
TMEM253-204ENST00000554844 MRPS9P82933 396 aaKnown RBP11.11□□□□□ -0.63
TMEM253-204ENST00000554844 NUCB1Q02818 461 aa11.11□□□□□ -0.63
TMEM253-204ENST00000554844 SMAD4Q13485 552 aaKnown RBP11.11□□□□□ -0.63
TMEM253-204ENST00000554844 NCOA7Q8NI08 942 aa11.11□□□□□ -0.63
TMEM253-204ENST00000554844 PLVAPQ9BX97 442 aa11.11□□□□□ -0.63
TMEM253-204ENST00000554844 EHMT1Q9H9B1 1298 aa11.11□□□□□ -0.63
TMEM253-204ENST00000554844 ERAP1Q9NZ08 941 aa11.11□□□□□ -0.63
TMEM253-204ENST00000554844 CD207Q9UJ71 328 aa11.11□□□□□ -0.63
TMEM253-204ENST00000554844 TUBE1Q9UJT0 475 aa11.11□□□□□ -0.63
TMEM253-204ENST00000554844 BAZ2BQ9UIF8 2168 aaKnown RBP11.1□□□□□ -0.63
TMEM253-204ENST00000554844 POTEB3A0JP26 581 aa11.1□□□□□ -0.63
TMEM253-204ENST00000554844 C19orf67A6NJJ6 358 aa11.1□□□□□ -0.63
TMEM253-204ENST00000554844 STXBP3O00186 592 aa11.1□□□□□ -0.63
TMEM253-204ENST00000554844 GRM6O15303 877 aa11.1□□□□□ -0.63
TMEM253-204ENST00000554844 MBTPS2O43462 519 aa11.1□□□□□ -0.63
TMEM253-204ENST00000554844 CHRNA1P02708 482 aa11.1□□□□□ -0.63
TMEM253-204ENST00000554844 MMP1P03956 469 aa11.1□□□□□ -0.63
TMEM253-204ENST00000554844 MARK3P27448 753 aa11.1□□□□□ -0.63
TMEM253-204ENST00000554844 GNAQP50148 359 aa11.1□□□□□ -0.63
TMEM253-204ENST00000554844 NHLH1Q02575 133 aa11.1□□□□□ -0.63
TMEM253-204ENST00000554844 HYAL1Q12794 435 aa11.1□□□□□ -0.63
TMEM253-204ENST00000554844 COL19A1Q14993 1142 aa11.1□□□□□ -0.63
TMEM253-204ENST00000554844 SMAD2Q15796 467 aaKnown RBP11.1□□□□□ -0.63
TMEM253-204ENST00000554844 GRIK4Q16099 956 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms