RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 GLG1Q92896 1179 aa12.14□□□□□ -0.47
SHMT2-213ENST00000554600 ATP6V0A1Q93050 837 aa12.14□□□□□ -0.47
SHMT2-213ENST00000554600 SLC9A2Q9UBY0 812 aa12.14□□□□□ -0.47
SHMT2-213ENST00000554600 TCEAL9Q9UHQ7 104 aa12.14□□□□□ -0.47
SHMT2-213ENST00000554600 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.13□□□□□ -0.47
SHMT2-213ENST00000554600 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.13□□□□□ -0.47
SHMT2-213ENST00000554600 MEIS1O00470 390 aa12.13□□□□□ -0.47
SHMT2-213ENST00000554600 IQCF3P0C7M6 154 aa12.13□□□□□ -0.47
SHMT2-213ENST00000554600 MARK3P27448 753 aa12.13□□□□□ -0.47
SHMT2-213ENST00000554600 PTK7Q13308 1070 aa12.13□□□□□ -0.47
SHMT2-213ENST00000554600 ZNF697Q5TEC3 545 aa12.13□□□□□ -0.47
SHMT2-213ENST00000554600 NECAB1Q8N987 351 aa12.13□□□□□ -0.47
SHMT2-213ENST00000554600 AFAP1L1Q8TED9 768 aa12.13□□□□□ -0.47
SHMT2-213ENST00000554600 FAM161BQ96MY7 647 aa12.13□□□□□ -0.47
SHMT2-213ENST00000554600 AIFM3Q96NN9 605 aa12.13□□□□□ -0.47
SHMT2-213ENST00000554600 RNPEPQ9H4A4 650 aa12.13□□□□□ -0.47
SHMT2-213ENST00000554600 AZI2Q9H6S1 392 aa12.13□□□□□ -0.47
SHMT2-213ENST00000554600 AGO4Q9HCK5 861 aaKnown RBP12.13□□□□□ -0.47
SHMT2-213ENST00000554600 SETD4Q9NVD3 440 aa12.13□□□□□ -0.47
SHMT2-213ENST00000554600 PCDHA4Q9UN74 947 aa12.13□□□□□ -0.47
SHMT2-213ENST00000554600 SIP14410 1827 aa12.12□□□□□ -0.47
SHMT2-213ENST00000554600 GSTTP1A0A1W2PQM5 241 aa12.12□□□□□ -0.47
SHMT2-213ENST00000554600 FAM86B1E9PN63 330 aa12.12□□□□□ -0.47
SHMT2-213ENST00000554600 FAM86B2P0C5J1 330 aa12.12□□□□□ -0.47
SHMT2-213ENST00000554600 GNAT1P11488 350 aa12.12□□□□□ -0.47
SHMT2-213ENST00000554600 ACTN1P12814 892 aa12.12□□□□□ -0.47
SHMT2-213ENST00000554600 SELPP16109 830 aa12.12□□□□□ -0.47
SHMT2-213ENST00000554600 XBP1P17861 261 aa12.12□□□□□ -0.47
SHMT2-213ENST00000554600 RFC2P35250 354 aa12.12□□□□□ -0.47
SHMT2-213ENST00000554600 ACTR2P61160 394 aa12.12□□□□□ -0.47
SHMT2-213ENST00000554600 SMAD3P84022 425 aaKnown RBP12.12□□□□□ -0.47
SHMT2-213ENST00000554600 C8orf34Q49A92 452 aa12.12□□□□□ -0.47
SHMT2-213ENST00000554600 PRR16Q569H4 304 aa12.12□□□□□ -0.47
SHMT2-213ENST00000554600 GPR153Q6NV75 609 aa12.12□□□□□ -0.47
SHMT2-213ENST00000554600 LRRC8DQ7L1W4 858 aa12.12□□□□□ -0.47
SHMT2-213ENST00000554600 NIPA1Q7RTP0 329 aa12.12□□□□□ -0.47
SHMT2-213ENST00000554600 BLIDQ8IZY5 108 aa12.12□□□□□ -0.47
SHMT2-213ENST00000554600 DHX38Q92620 1227 aaKnown RBP12.12□□□□□ -0.47
SHMT2-213ENST00000554600 ZNF577Q9BSK1 485 aa12.12□□□□□ -0.47
SHMT2-213ENST00000554600 SMARCAD1Q9H4L7 1026 aa12.12□□□□□ -0.47
SHMT2-213ENST00000554600 ERAP1Q9NZ08 941 aa12.12□□□□□ -0.47
SHMT2-213ENST00000554600 ORC3Q9UBD5 711 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-213ENST00000554600 KCNJ14Q9UNX9 436 aa12.12□□□□□ -0.47
SHMT2-213ENST00000554600 NFASCO94856 1347 aa12.11□□□□□ -0.47
SHMT2-213ENST00000554600 STK36Q9NRP7 1315 aa12.11□□□□□ -0.47
SHMT2-213ENST00000554600 GRXCR1A8MXD5 290 aa12.11□□□□□ -0.47
SHMT2-213ENST00000554600 IPO5O00410 1097 aaKnown RBP12.11□□□□□ -0.47
SHMT2-213ENST00000554600 BACH1O14867 736 aa12.11□□□□□ -0.47
SHMT2-213ENST00000554600 TREHO43280 583 aa12.11□□□□□ -0.47
SHMT2-213ENST00000554600 LARGE1O95461 756 aa12.11□□□□□ -0.47
SHMT2-213ENST00000554600 PFKMP08237 780 aa12.11□□□□□ -0.47
SHMT2-213ENST00000554600 CYP3A4P08684 503 aa12.11□□□□□ -0.47
SHMT2-213ENST00000554600 CKBP12277 381 aa12.11□□□□□ -0.47
SHMT2-213ENST00000554600 THPOP40225 353 aa12.11□□□□□ -0.47
SHMT2-213ENST00000554600 FOSBP53539 338 aa12.11□□□□□ -0.47
SHMT2-213ENST00000554600 IGBP1P78318 339 aa12.11□□□□□ -0.47
SHMT2-213ENST00000554600 SETQ01105 290 aaPredicted RBP12.11□□□□□ -0.47
SHMT2-213ENST00000554600 PPFIA1Q13136 1202 aa12.11□□□□□ -0.47
SHMT2-213ENST00000554600 ITGB3BPQ13352 177 aaPredicted RBP12.11□□□□□ -0.47
SHMT2-213ENST00000554600 HIC1Q14526 733 aa12.11□□□□□ -0.47
SHMT2-213ENST00000554600 ME3Q16798 604 aa12.11□□□□□ -0.47
SHMT2-213ENST00000554600 FAM109BQ6ICB4 259 aaPredicted RBP12.11□□□□□ -0.47
SHMT2-213ENST00000554600 HERVK_113Q902F9 699 aa12.11□□□□□ -0.47
SHMT2-213ENST00000554600 WASF1Q92558 559 aa12.11□□□□□ -0.47
SHMT2-213ENST00000554600 CTAGE1Q96RT6 745 aa12.11□□□□□ -0.47
SHMT2-213ENST00000554600 C22orf23Q9BZE7 217 aa12.11□□□□□ -0.47
SHMT2-213ENST00000554600 CXXC1Q9P0U4 656 aaPredicted RBP12.11□□□□□ -0.47
SHMT2-213ENST00000554600 TRPC6Q9Y210 931 aa12.11□□□□□ -0.47
SHMT2-213ENST00000554600 SLC4A7Q9Y6M7 1214 aa12.11□□□□□ -0.47
SHMT2-213ENST00000554600 VCANP13611 3396 aa12.11□□□□□ -0.47
SHMT2-213ENST00000554600 IGLV3-22A0A075B6J6 115 aa12.1□□□□□ -0.47
SHMT2-213ENST00000554600 CTSHP09668 335 aa12.1□□□□□ -0.47
SHMT2-213ENST00000554600 ZNF618Q5T7W0 954 aa12.1□□□□□ -0.47
SHMT2-213ENST00000554600 GALNT17Q6IS24 598 aa12.1□□□□□ -0.47
SHMT2-213ENST00000554600 SERINC5Q86VE9 423 aa12.1□□□□□ -0.47
SHMT2-213ENST00000554600 TBCKQ8TEA7 893 aa12.1□□□□□ -0.47
SHMT2-213ENST00000554600 LMBR1Q8WVP7 490 aa12.1□□□□□ -0.47
SHMT2-213ENST00000554600 WNT8BQ93098 351 aa12.1□□□□□ -0.47
SHMT2-213ENST00000554600 GTF3C6Q969F1 213 aa12.1□□□□□ -0.47
SHMT2-213ENST00000554600 IL17RAQ96F46 866 aa12.1□□□□□ -0.47
SHMT2-213ENST00000554600 UPF2Q9HAU5 1272 aaKnown RBP12.1□□□□□ -0.47
SHMT2-213ENST00000554600 EMSYQ7Z589 1322 aa12.1□□□□□ -0.47
SHMT2-213ENST00000554600 NRCAMQ92823 1304 aa12.1□□□□□ -0.47
SHMT2-213ENST00000554600 CCDC194A0A1B0GVG4 234 aa12.09□□□□□ -0.47
SHMT2-213ENST00000554600 RSPH10B2B2RC85 870 aa12.09□□□□□ -0.47
SHMT2-213ENST00000554600 PARNO95453 639 aaKnown RBP12.09□□□□□ -0.47
SHMT2-213ENST00000554600 CTDNEP1O95476 244 aa12.09□□□□□ -0.47
SHMT2-213ENST00000554600 RSPH10BP0C881 870 aa12.09□□□□□ -0.47
SHMT2-213ENST00000554600 DNAJB2P25686 324 aa12.09□□□□□ -0.47
SHMT2-213ENST00000554600 KCNJ6P48051 423 aa12.09□□□□□ -0.47
SHMT2-213ENST00000554600 STAT5BP51692 787 aa12.09□□□□□ -0.47
SHMT2-213ENST00000554600 NONOQ15233 471 aaKnown RBP eCLIP12.09□□□□□ -0.47
SHMT2-213ENST00000554600 GRIK4Q16099 956 aa12.09□□□□□ -0.47
SHMT2-213ENST00000554600 RASIP1Q5U651 963 aa12.09□□□□□ -0.47
SHMT2-213ENST00000554600 FAM160B1Q5W0V3 765 aa12.09□□□□□ -0.47
SHMT2-213ENST00000554600 MIS18BP1Q6P0N0 1132 aa12.09□□□□□ -0.47
SHMT2-213ENST00000554600 KRT25Q7Z3Z0 450 aa12.09□□□□□ -0.47
SHMT2-213ENST00000554600 FAM177A1Q8N128 213 aaPredicted RBP12.09□□□□□ -0.47
SHMT2-213ENST00000554600 DAGLBQ8NCG7 672 aa12.09□□□□□ -0.47
SHMT2-213ENST00000554600 CRYGNQ8WXF5 182 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms