RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 UBASH3AP57075 661 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 BIRC3Q13489 604 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 QPCTQ16769 361 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 C1orf53Q5VUE5 145 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 METTL3Q86U44 580 aaKnown RBP3.08□□□□□ -1.92
PRPF39-206ENST00000554429 C11orf74Q86VG3 221 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 GIMAP8Q8ND71 665 aaPredicted RBP3.08□□□□□ -1.92
PRPF39-206ENST00000554429 U2AF1L4Q8WU68 220 aaKnown RBP3.08□□□□□ -1.92
PRPF39-206ENST00000554429 STON2Q8WXE9 905 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 N4BP2L2Q92802 583 aaPredicted RBP3.08□□□□□ -1.92
PRPF39-206ENST00000554429 C12orf42Q96LP6 360 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 SPAG5Q96R06 1193 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 COL25A1Q9BXS0 654 aaPredicted RBP3.08□□□□□ -1.92
PRPF39-206ENST00000554429 SLC7A5P2Q9GIP4 190 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 NEUROD4Q9HD90 331 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 HMX1Q9NP08 348 aaPredicted RBP3.08□□□□□ -1.92
PRPF39-206ENST00000554429 CNNM1Q9NRU3 951 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 TYW1Q9NV66 732 aaKnown RBP3.08□□□□□ -1.92
PRPF39-206ENST00000554429 CNTN3Q9P232 1028 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 SCAF8Q9UPN6 1271 aaKnown RBP3.08□□□□□ -1.92
PRPF39-206ENST00000554429 WASF2Q9Y6W5 498 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 MYO5AQ9Y4I1 1855 aaKnown RBP3.08□□□□□ -1.92
PRPF39-206ENST00000554429 hCG_1642624A0A1W2PR95 340 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 TMEM110-MUSTN1A8MSY1 372 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 TCP10L2B9ZVM9 353 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 PAX4O43316 350 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 SLC4A1P02730 911 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 HMGCRP04035 888 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 COPAP53621 1224 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 EXOSC9Q06265 439 aaKnown RBP3.08□□□□□ -1.92
PRPF39-206ENST00000554429 PABPC4Q13310 644 aaKnown RBP eCLIP3.08□□□□□ -1.92
PRPF39-206ENST00000554429 TMEM259Q4ZIN3 620 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 FKBP15Q5T1M5 1219 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 CDCA2Q69YH5 1023 aaPredicted RBP3.08□□□□□ -1.92
PRPF39-206ENST00000554429 PPP4R3AQ6IN85 833 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 GALNT17Q6IS24 598 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 KRTAP5-3Q6L8H2 238 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 SH3BP5LQ7L8J4 393 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 GLYCTKQ8IVS8 523 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 KLHL23Q8NBE8 558 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 RAET1EQ8TD07 263 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 PARD3BQ8TEW8 1205 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 TTC14Q96N46 770 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 KRTAP4-5Q9BYR2 181 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 PUS3Q9BZE2 481 aaKnown RBP3.08□□□□□ -1.92
PRPF39-206ENST00000554429 USP44Q9H0E7 712 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 BICC1Q9H694 974 aaKnown RBP3.08□□□□□ -1.92
PRPF39-206ENST00000554429 CNNM2Q9H8M5 875 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 ZFP64Q9NPA5 681 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 COPRSQ9NQ92 184 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 VTI1BQ9UEU0 232 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 XPO7Q9UIA9 1087 aaKnown RBP3.08□□□□□ -1.92
PRPF39-206ENST00000554429 FZD1Q9UP38 647 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 ATP8A1Q9Y2Q0 1164 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 RPTORQ8N122 1335 aa3.08□□□□□ -1.92
PRPF39-206ENST00000554429 COL11A1P12107 1806 aaPredicted RBP3.07□□□□□ -1.92
PRPF39-206ENST00000554429 LINC00854A0A1B0GVQ3 168 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 SYNDIG1LA6NDD5 238 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 RASA4BC9J798 803 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 F8W031 263 aaPredicted RBP3.07□□□□□ -1.92
PRPF39-206ENST00000554429 SNAP23O00161 211 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 AKR1B10O60218 316 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 ADCY3O60266 1144 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 TMEM127O75204 238 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 CSPG5O95196 566 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 INHAP05111 366 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 INPP5BP32019 993 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 KIF5BP33176 963 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 IL15P40933 162 aaPredicted RBP3.07□□□□□ -1.92
PRPF39-206ENST00000554429 SARSP49591 514 aaKnown RBP3.07□□□□□ -1.92
PRPF39-206ENST00000554429 PRKCZQ05513 592 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 MCL1Q07820 350 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 PRKG1Q13976 671 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 MTFR1Q15390 333 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 MORN1Q5T089 497 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 ARTNQ5T4W7 220 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 LRCH2Q5VUJ6 765 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 RTL10Q7L3V2 364 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 KCT2Q8NC54 265 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 SOCS4Q8WXH5 440 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 ARHGAP45Q92619 1136 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 ATP6V1E2Q96A05 226 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 ZNF594Q96JF6 807 aaPredicted RBP3.07□□□□□ -1.92
PRPF39-206ENST00000554429 SCLT1Q96NL6 688 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.07□□□□□ -1.92
PRPF39-206ENST00000554429 UNC93B1Q9H1C4 597 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 TMOD4Q9NZQ9 345 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 HERC5Q9UII4 1024 aaKnown RBP3.07□□□□□ -1.92
PRPF39-206ENST00000554429 GTF2A1LQ9UNN4 478 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 MORC2Q9Y6X9 1032 aaPredicted RBP3.07□□□□□ -1.92
PRPF39-206ENST00000554429 LRRC37A2A6NM11 1700 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 MROH7-TTC4A0A0A0MT08 1334 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 PLXNA1Q9UIW2 1896 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 MYH7P12883 1935 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 MYH8P13535 1937 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 PCNTO95613 3336 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 SLC27A2O14975 620 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 SPTLC2O15270 562 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 CCP110O43303 1012 aa3.07□□□□□ -1.92
PRPF39-206ENST00000554429 RASA4O43374 803 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms