RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 PPP1R18Q6NYC8 613 aa13.62□□□□□ -0.23
TRAPPC6B-204ENST00000554018 CYP2W1Q8TAV3 490 aa13.62□□□□□ -0.23
TRAPPC6B-204ENST00000554018 CDHR1Q96JP9 859 aa13.62□□□□□ -0.23
TRAPPC6B-204ENST00000554018 PGBD1Q96JS3 809 aa13.62□□□□□ -0.23
TRAPPC6B-204ENST00000554018 COL25A1Q9BXS0 654 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC6B-204ENST00000554018 CERS4Q9HA82 394 aa13.62□□□□□ -0.23
TRAPPC6B-204ENST00000554018 JADE2Q9NQC1 790 aa13.62□□□□□ -0.23
TRAPPC6B-204ENST00000554018 PRDM6Q9NQX0 595 aa13.62□□□□□ -0.23
TRAPPC6B-204ENST00000554018 ZNF215Q9UL58 517 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC6B-204ENST00000554018 EVPLQ92817 2033 aa13.61□□□□□ -0.23
TRAPPC6B-204ENST00000554018 GSTTP1A0A1W2PQM5 241 aa13.61□□□□□ -0.23
TRAPPC6B-204ENST00000554018 SMCO2A6NFE2 343 aa13.61□□□□□ -0.23
TRAPPC6B-204ENST00000554018 KIF28PB7ZC32 967 aa13.61□□□□□ -0.23
TRAPPC6B-204ENST00000554018 RFXAPO00287 272 aa13.61□□□□□ -0.23
TRAPPC6B-204ENST00000554018 ARHGEF15O94989 841 aa13.61□□□□□ -0.23
TRAPPC6B-204ENST00000554018 TCF7P36402 384 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC6B-204ENST00000554018 ARHGAP4P98171 946 aa13.61□□□□□ -0.23
TRAPPC6B-204ENST00000554018 CCDC85BQ15834 202 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC6B-204ENST00000554018 BLOC1S2Q6QNY1 142 aa13.61□□□□□ -0.23
TRAPPC6B-204ENST00000554018 LMBR1Q8WVP7 490 aa13.61□□□□□ -0.23
TRAPPC6B-204ENST00000554018 BRF1Q92994 677 aa13.61□□□□□ -0.23
TRAPPC6B-204ENST00000554018 EHMT1Q9H9B1 1298 aa13.61□□□□□ -0.23
TRAPPC6B-204ENST00000554018 TMEM260Q9NX78 707 aa13.61□□□□□ -0.23
TRAPPC6B-204ENST00000554018 BARHL2Q9NY43 387 aa13.61□□□□□ -0.23
TRAPPC6B-204ENST00000554018 SIP14410 1827 aa13.61□□□□□ -0.23
TRAPPC6B-204ENST00000554018 ABHD14A-ACY1A0A1B0GW23 586 aa13.6□□□□□ -0.23
TRAPPC6B-204ENST00000554018 TLL1O43897 1013 aa13.6□□□□□ -0.23
TRAPPC6B-204ENST00000554018 LGR5O75473 907 aa13.6□□□□□ -0.23
TRAPPC6B-204ENST00000554018 GNAT1P11488 350 aa13.6□□□□□ -0.23
TRAPPC6B-204ENST00000554018 RPS6KB1P23443 525 aa13.6□□□□□ -0.23
TRAPPC6B-204ENST00000554018 METAP2P50579 478 aaKnown RBP eCLIP13.6□□□□□ -0.23
TRAPPC6B-204ENST00000554018 RCAN1P53805 252 aa13.6□□□□□ -0.23
TRAPPC6B-204ENST00000554018 TAP1Q03518 808 aa13.6□□□□□ -0.23
TRAPPC6B-204ENST00000554018 IKBKEQ14164 716 aa13.6□□□□□ -0.23
TRAPPC6B-204ENST00000554018 SPRED2Q7Z698 418 aa13.6□□□□□ -0.23
TRAPPC6B-204ENST00000554018 SEPT1Q8WYJ6 367 aa13.6□□□□□ -0.23
TRAPPC6B-204ENST00000554018 MXRA8Q9BRK3 442 aa13.6□□□□□ -0.23
TRAPPC6B-204ENST00000554018 ANO3Q9BYT9 981 aa13.6□□□□□ -0.23
TRAPPC6B-204ENST00000554018 OSBPL7Q9BZF2 842 aa13.6□□□□□ -0.23
TRAPPC6B-204ENST00000554018 KCNH7Q9NS40 1196 aa13.6□□□□□ -0.23
TRAPPC6B-204ENST00000554018 EMSYQ7Z589 1322 aa13.6□□□□□ -0.23
TRAPPC6B-204ENST00000554018 TCF20Q9UGU0 1960 aaKnown RBP13.6□□□□□ -0.23
TRAPPC6B-204ENST00000554018 MYO7AQ13402 2215 aa13.59□□□□□ -0.23
TRAPPC6B-204ENST00000554018 LCHNA4D1U4 455 aa13.59□□□□□ -0.23
TRAPPC6B-204ENST00000554018 EPOPA6NHQ4 379 aa13.59□□□□□ -0.23
TRAPPC6B-204ENST00000554018 hCG_1984214I3L0E3 225 aa13.59□□□□□ -0.23
TRAPPC6B-204ENST00000554018 ADAMTS3O15072 1205 aa13.59□□□□□ -0.23
TRAPPC6B-204ENST00000554018 MAFGO15525 162 aa13.59□□□□□ -0.23
TRAPPC6B-204ENST00000554018 REC8O95072 547 aa13.59□□□□□ -0.23
TRAPPC6B-204ENST00000554018 FOSP01100 380 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC6B-204ENST00000554018 CTSHP09668 335 aa13.59□□□□□ -0.23
TRAPPC6B-204ENST00000554018 ARP10275 920 aa13.59□□□□□ -0.23
TRAPPC6B-204ENST00000554018 MARK3P27448 753 aa13.59□□□□□ -0.23
TRAPPC6B-204ENST00000554018 ADAM17P78536 824 aa13.59□□□□□ -0.23
TRAPPC6B-204ENST00000554018 PFKFB3Q16875 520 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC6B-204ENST00000554018 FAM117BQ6P1L5 589 aa13.59□□□□□ -0.23
TRAPPC6B-204ENST00000554018 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.59□□□□□ -0.23
TRAPPC6B-204ENST00000554018 TEX2Q8IWB9 1127 aa13.59□□□□□ -0.23
TRAPPC6B-204ENST00000554018 ZNF713Q8N859 430 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC6B-204ENST00000554018 DBF4BQ8NFT6 615 aa13.59□□□□□ -0.23
TRAPPC6B-204ENST00000554018 ARNTL2Q8WYA1 636 aa13.59□□□□□ -0.23
TRAPPC6B-204ENST00000554018 GLG1Q92896 1179 aa13.59□□□□□ -0.23
TRAPPC6B-204ENST00000554018 ZBED2Q9BTP6 218 aa13.59□□□□□ -0.23
TRAPPC6B-204ENST00000554018 COL4A4P53420 1690 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC6B-204ENST00000554018 CCDC196A0A1B0GTZ2 297 aa13.58□□□□□ -0.24
TRAPPC6B-204ENST00000554018 SCG2P13521 617 aa13.58□□□□□ -0.24
TRAPPC6B-204ENST00000554018 CLK2P49760 499 aaKnown RBP13.58□□□□□ -0.24
TRAPPC6B-204ENST00000554018 PPFIA1Q13136 1202 aa13.58□□□□□ -0.24
TRAPPC6B-204ENST00000554018 CEP55Q53EZ4 464 aa13.58□□□□□ -0.24
TRAPPC6B-204ENST00000554018 PLEKHG4Q58EX7 1191 aa13.58□□□□□ -0.24
TRAPPC6B-204ENST00000554018 JAKMIP3Q5VZ66 844 aa13.58□□□□□ -0.24
TRAPPC6B-204ENST00000554018 RUFY4Q6ZNE9 571 aa13.58□□□□□ -0.24
TRAPPC6B-204ENST00000554018 MICALL1Q8N3F8 863 aa13.58□□□□□ -0.24
TRAPPC6B-204ENST00000554018 GLT8D2Q9H1C3 349 aa13.58□□□□□ -0.24
TRAPPC6B-204ENST00000554018 SMARCAD1Q9H4L7 1026 aa13.58□□□□□ -0.24
TRAPPC6B-204ENST00000554018 JPH1Q9HDC5 661 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC6B-204ENST00000554018 ERAP1Q9NZ08 941 aa13.58□□□□□ -0.24
TRAPPC6B-204ENST00000554018 NRCAMQ92823 1304 aa13.58□□□□□ -0.24
TRAPPC6B-204ENST00000554018 NLRC5Q86WI3 1866 aa13.57□□□□□ -0.24
TRAPPC6B-204ENST00000554018 MEIS1O00470 390 aa13.57□□□□□ -0.24
TRAPPC6B-204ENST00000554018 PRPF3O43395 683 aaKnown RBP13.57□□□□□ -0.24
TRAPPC6B-204ENST00000554018 EFCAB14O75071 495 aa13.57□□□□□ -0.24
TRAPPC6B-204ENST00000554018 PPFIA3O75145 1194 aa13.57□□□□□ -0.24
TRAPPC6B-204ENST00000554018 CAND2O75155 1236 aa13.57□□□□□ -0.24
TRAPPC6B-204ENST00000554018 GJB5O95377 273 aa13.57□□□□□ -0.24
TRAPPC6B-204ENST00000554018 NEFLP07196 543 aa13.57□□□□□ -0.24
TRAPPC6B-204ENST00000554018 PSMA5P28066 241 aa13.57□□□□□ -0.24
TRAPPC6B-204ENST00000554018 ZNF76P36508 570 aa13.57□□□□□ -0.24
TRAPPC6B-204ENST00000554018 SREBF1P36956 1147 aa13.57□□□□□ -0.24
TRAPPC6B-204ENST00000554018 ITGB3BPQ13352 177 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC6B-204ENST00000554018 AP3B2Q13367 1082 aa13.57□□□□□ -0.24
TRAPPC6B-204ENST00000554018 GRIK4Q16099 956 aa13.57□□□□□ -0.24
TRAPPC6B-204ENST00000554018 PKN1Q16512 942 aa13.57□□□□□ -0.24
TRAPPC6B-204ENST00000554018 KRT40Q6A162 431 aa13.57□□□□□ -0.24
TRAPPC6B-204ENST00000554018 FBXL16Q8N461 479 aa13.57□□□□□ -0.24
TRAPPC6B-204ENST00000554018 PHKBQ93100 1093 aa13.57□□□□□ -0.24
TRAPPC6B-204ENST00000554018 PCYT2Q99447 389 aa13.57□□□□□ -0.24
TRAPPC6B-204ENST00000554018 RAD9AQ99638 391 aa13.57□□□□□ -0.24
TRAPPC6B-204ENST00000554018 SDF4Q9BRK5 362 aa13.57□□□□□ -0.24
TRAPPC6B-204ENST00000554018 AGXT2Q9BYV1 514 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms