RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 SIPA1L3O60292 1781 aaPredicted RBP4.34□□□□□ -1.71
SLIRP-202ENST00000553981 COL15A1P39059 1388 aa4.33□□□□□ -1.72
SLIRP-202ENST00000553981 ZNF541Q9H0D2 1346 aa4.33□□□□□ -1.72
SLIRP-202ENST00000553981 ABLIM1O14639 778 aa4.33□□□□□ -1.72
SLIRP-202ENST00000553981 SIGLEC6O43699 453 aa4.33□□□□□ -1.72
SLIRP-202ENST00000553981 HMOX1P09601 288 aa4.33□□□□□ -1.72
SLIRP-202ENST00000553981 MTHFSP49914 203 aa4.33□□□□□ -1.72
SLIRP-202ENST00000553981 EIF5P55010 431 aaKnown RBP4.33□□□□□ -1.72
SLIRP-202ENST00000553981 TAGLNQ01995 201 aaKnown RBP4.33□□□□□ -1.72
SLIRP-202ENST00000553981 SKOR2Q2VWA4 1001 aaPredicted RBP4.33□□□□□ -1.72
SLIRP-202ENST00000553981 HSF5Q4G112 596 aaPredicted RBP4.33□□□□□ -1.72
SLIRP-202ENST00000553981 PLEKHO1Q53GL0 409 aaPredicted RBP4.33□□□□□ -1.72
SLIRP-202ENST00000553981 CDCP2Q5VXM1 449 aa4.33□□□□□ -1.72
SLIRP-202ENST00000553981 OLFML2BQ68BL8 750 aa4.33□□□□□ -1.72
SLIRP-202ENST00000553981 PRR5LQ6MZQ0 368 aa4.33□□□□□ -1.72
SLIRP-202ENST00000553981 GALNT18Q6P9A2 607 aa4.33□□□□□ -1.72
SLIRP-202ENST00000553981 FAM129CQ86XR2 697 aa4.33□□□□□ -1.72
SLIRP-202ENST00000553981 C2CD5Q86YS7 1000 aa4.33□□□□□ -1.72
SLIRP-202ENST00000553981 SMC1BQ8NDV3 1235 aa4.33□□□□□ -1.72
SLIRP-202ENST00000553981 IL17REQ8NFR9 667 aa4.33□□□□□ -1.72
SLIRP-202ENST00000553981 FEZF2Q8TBJ5 459 aa4.33□□□□□ -1.72
SLIRP-202ENST00000553981 MZB1Q8WU39 189 aa4.33□□□□□ -1.72
SLIRP-202ENST00000553981 ZNF512BQ96KM6 892 aaPredicted RBP4.33□□□□□ -1.72
SLIRP-202ENST00000553981 SLC52A2Q9HAB3 445 aa4.33□□□□□ -1.72
SLIRP-202ENST00000553981 MRS2Q9HD23 443 aa4.33□□□□□ -1.72
SLIRP-202ENST00000553981 COPRSQ9NQ92 184 aa4.33□□□□□ -1.72
SLIRP-202ENST00000553981 KCNQ5Q9NR82 932 aa4.33□□□□□ -1.72
SLIRP-202ENST00000553981 TNFRSF10DQ9UBN6 386 aa4.33□□□□□ -1.72
SLIRP-202ENST00000553981 GPR55Q9Y2T6 319 aaPredicted RBP4.33□□□□□ -1.72
SLIRP-202ENST00000553981 SCN7AQ01118 1682 aa4.32□□□□□ -1.72
SLIRP-202ENST00000553981 COL3A1P02461 1466 aaPredicted RBP4.32□□□□□ -1.72
SLIRP-202ENST00000553981 CNTNAP1P78357 1384 aa4.32□□□□□ -1.72
SLIRP-202ENST00000553981 WTIPA6NIX2 430 aaPredicted RBP4.32□□□□□ -1.72
SLIRP-202ENST00000553981 GREM1O60565 184 aa4.32□□□□□ -1.72
SLIRP-202ENST00000553981 CLEC3AO75596 197 aa4.32□□□□□ -1.72
SLIRP-202ENST00000553981 CAMTA2O94983 1202 aa4.32□□□□□ -1.72
SLIRP-202ENST00000553981 A1BGP04217 495 aa4.32□□□□□ -1.72
SLIRP-202ENST00000553981 MPOP05164 745 aa4.32□□□□□ -1.72
SLIRP-202ENST00000553981 HSPA5P11021 654 aaKnown RBP4.32□□□□□ -1.72
SLIRP-202ENST00000553981 VEGFAP15692 232 aaPredicted RBP4.32□□□□□ -1.72
SLIRP-202ENST00000553981 CANXP27824 592 aaKnown RBP4.32□□□□□ -1.72
SLIRP-202ENST00000553981 RAD51AP2Q09MP3 1159 aa4.32□□□□□ -1.72
SLIRP-202ENST00000553981 CNKSR3Q6P9H4 555 aa4.32□□□□□ -1.72
SLIRP-202ENST00000553981 ERMP1Q7Z2K6 904 aa4.32□□□□□ -1.72
SLIRP-202ENST00000553981 IGDCC3Q8IVU1 814 aa4.32□□□□□ -1.72
SLIRP-202ENST00000553981 ATG4CQ96DT6 458 aa4.32□□□□□ -1.72
SLIRP-202ENST00000553981 ZNF496Q96IT1 587 aaPredicted RBP4.32□□□□□ -1.72
SLIRP-202ENST00000553981 POLR3GLQ9BT43 218 aa4.32□□□□□ -1.72
SLIRP-202ENST00000553981 CNNM2Q9H8M5 875 aa4.32□□□□□ -1.72
SLIRP-202ENST00000553981 CHST7Q9NS84 486 aa4.32□□□□□ -1.72
SLIRP-202ENST00000553981 ERVK13-1Q9NX77 482 aa4.32□□□□□ -1.72
SLIRP-202ENST00000553981 TAF6LQ9Y6J9 622 aa4.32□□□□□ -1.72
SLIRP-202ENST00000553981 BCORQ6W2J9 1755 aa4.32□□□□□ -1.72
SLIRP-202ENST00000553981 ARFGEF2Q9Y6D5 1785 aa4.32□□□□□ -1.72
SLIRP-202ENST00000553981 KDM2BQ8NHM5 1336 aa4.31□□□□□ -1.72
SLIRP-202ENST00000553981 HSPA8P11142 646 aaKnown RBP4.31□□□□□ -1.72
SLIRP-202ENST00000553981 PRKCAP17252 672 aa4.31□□□□□ -1.72
SLIRP-202ENST00000553981 EIF4A3P38919 411 aaKnown RBP4.31□□□□□ -1.72
SLIRP-202ENST00000553981 ARL4AP40617 200 aa4.31□□□□□ -1.72
SLIRP-202ENST00000553981 CCNFP41002 786 aa4.31□□□□□ -1.72
SLIRP-202ENST00000553981 CTSKP43235 329 aa4.31□□□□□ -1.72
SLIRP-202ENST00000553981 CRKP46108 304 aa4.31□□□□□ -1.72
SLIRP-202ENST00000553981 KRTAP10-2P60368 255 aa4.31□□□□□ -1.72
SLIRP-202ENST00000553981 RAB3GAP1Q15042 981 aa4.31□□□□□ -1.72
SLIRP-202ENST00000553981 DLK2Q6UY11 383 aa4.31□□□□□ -1.72
SLIRP-202ENST00000553981 NLRC3Q7RTR2 1065 aa4.31□□□□□ -1.72
SLIRP-202ENST00000553981 TMC6Q7Z403 805 aa4.31□□□□□ -1.72
SLIRP-202ENST00000553981 SLCO6A1Q86UG4 719 aa4.31□□□□□ -1.72
SLIRP-202ENST00000553981 LDHDQ86WU2 507 aa4.31□□□□□ -1.72
SLIRP-202ENST00000553981 C16orf71Q8IYS4 520 aaPredicted RBP4.31□□□□□ -1.72
SLIRP-202ENST00000553981 ZDHHC14Q8IZN3 488 aa4.31□□□□□ -1.72
SLIRP-202ENST00000553981 TTLL6Q8N841 843 aa4.31□□□□□ -1.72
SLIRP-202ENST00000553981 SYT8Q8NBV8 401 aa4.31□□□□□ -1.72
SLIRP-202ENST00000553981 TAF1DQ9H5J8 278 aaPredicted RBP4.31□□□□□ -1.72
SLIRP-202ENST00000553981 EHMT1Q9H9B1 1298 aa4.31□□□□□ -1.72
SLIRP-202ENST00000553981 TNFRSF12AQ9NP84 129 aa4.31□□□□□ -1.72
SLIRP-202ENST00000553981 SUPT16HQ9Y5B9 1047 aaKnown RBP4.31□□□□□ -1.72
SLIRP-202ENST00000553981 PCDHA5Q9Y5H7 936 aa4.31□□□□□ -1.72
SLIRP-202ENST00000553981 USP16Q9Y5T5 823 aa4.31□□□□□ -1.72
SLIRP-202ENST00000553981 COL4A1P02462 1669 aa4.31□□□□□ -1.72
SLIRP-202ENST00000553981 NUDT19A8MXV4 375 aa4.3□□□□□ -1.72
SLIRP-202ENST00000553981 MEIS1O00470 390 aa4.3□□□□□ -1.72
SLIRP-202ENST00000553981 ZNF205O95201 554 aa4.3□□□□□ -1.72
SLIRP-202ENST00000553981 HSP90AB1P08238 724 aaKnown RBP4.3□□□□□ -1.72
SLIRP-202ENST00000553981 CELA3BP08861 270 aa4.3□□□□□ -1.72
SLIRP-202ENST00000553981 SRGNP10124 158 aa4.3□□□□□ -1.72
SLIRP-202ENST00000553981 ENDOUP21128 410 aaKnown RBP4.3□□□□□ -1.72
SLIRP-202ENST00000553981 BMP8BP34820 402 aa4.3□□□□□ -1.72
SLIRP-202ENST00000553981 LBX1P52954 281 aa4.3□□□□□ -1.72
SLIRP-202ENST00000553981 NFKB2Q00653 900 aa4.3□□□□□ -1.72
SLIRP-202ENST00000553981 CLCQ05315 142 aa4.3□□□□□ -1.72
SLIRP-202ENST00000553981 TMEM62Q0P6H9 643 aa4.3□□□□□ -1.72
SLIRP-202ENST00000553981 LAPTM5Q13571 262 aa4.3□□□□□ -1.72
SLIRP-202ENST00000553981 HLFQ16534 295 aa4.3□□□□□ -1.72
SLIRP-202ENST00000553981 AMOTQ4VCS5 1084 aa4.3□□□□□ -1.72
SLIRP-202ENST00000553981 DBX2Q6ZNG2 339 aa4.3□□□□□ -1.72
SLIRP-202ENST00000553981 PRRT2Q7Z6L0 340 aaPredicted RBP4.3□□□□□ -1.72
SLIRP-202ENST00000553981 SP8Q8IXZ3 490 aa4.3□□□□□ -1.72
SLIRP-202ENST00000553981 TMEM192Q8IY95 271 aa4.3□□□□□ -1.72
SLIRP-202ENST00000553981 LINC01356Q8N9X3 169 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms