RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 H3BRB1 525 aa10.61□□□□□ -0.71
PRKCH-208ENST00000553846 PPP1R11O60927 126 aaPredicted RBP10.61□□□□□ -0.71
PRKCH-208ENST00000553846 DGKIO75912 1065 aa10.61□□□□□ -0.71
PRKCH-208ENST00000553846 GGPS1O95749 300 aa10.61□□□□□ -0.71
PRKCH-208ENST00000553846 FGAP02671 866 aa10.61□□□□□ -0.71
PRKCH-208ENST00000553846 ITGB1P05556 798 aa10.61□□□□□ -0.71
PRKCH-208ENST00000553846 NBL1P41271 181 aa10.61□□□□□ -0.71
PRKCH-208ENST00000553846 VSIG10LQ86VR7 867 aa10.61□□□□□ -0.71
PRKCH-208ENST00000553846 ADGRF4Q8IZF3 695 aa10.61□□□□□ -0.71
PRKCH-208ENST00000553846 SPPL3Q8TCT6 385 aa10.61□□□□□ -0.71
PRKCH-208ENST00000553846 ATP8B4Q8TF62 1192 aa10.61□□□□□ -0.71
PRKCH-208ENST00000553846 MTMR8Q96EF0 704 aa10.61□□□□□ -0.71
PRKCH-208ENST00000553846 GPATCH3Q96I76 525 aa10.61□□□□□ -0.71
PRKCH-208ENST00000553846 TUT1Q9H6E5 874 aaKnown RBP10.61□□□□□ -0.71
PRKCH-208ENST00000553846 TELO2Q9Y4R8 837 aa10.61□□□□□ -0.71
PRKCH-208ENST00000553846 MRPL42Q9Y6G3 142 aaKnown RBP10.61□□□□□ -0.71
PRKCH-208ENST00000553846 NEDD4P46934 1319 aa10.6□□□□□ -0.71
PRKCH-208ENST00000553846 FRMPD4Q14CM0 1322 aa10.6□□□□□ -0.71
PRKCH-208ENST00000553846 PDGFBP01127 241 aaPredicted RBP10.6□□□□□ -0.71
PRKCH-208ENST00000553846 TGFB3P10600 412 aa10.6□□□□□ -0.71
PRKCH-208ENST00000553846 ATF7P17544 494 aaPredicted RBP10.6□□□□□ -0.71
PRKCH-208ENST00000553846 NDUFV1P49821 464 aa10.6□□□□□ -0.71
PRKCH-208ENST00000553846 NUBP1P53384 320 aa10.6□□□□□ -0.71
PRKCH-208ENST00000553846 SEMA3FQ13275 785 aa10.6□□□□□ -0.71
PRKCH-208ENST00000553846 KCNC3Q14003 757 aa10.6□□□□□ -0.71
PRKCH-208ENST00000553846 LPIN1Q14693 890 aa10.6□□□□□ -0.71
PRKCH-208ENST00000553846 PTPN21Q16825 1174 aa10.6□□□□□ -0.71
PRKCH-208ENST00000553846 SLC35G1Q2M3R5 365 aa10.6□□□□□ -0.71
PRKCH-208ENST00000553846 C20orf194Q5TEA3 1177 aa10.6□□□□□ -0.71
PRKCH-208ENST00000553846 ARHGEF16Q5VV41 709 aa10.6□□□□□ -0.71
PRKCH-208ENST00000553846 TRIM50Q86XT4 487 aa10.6□□□□□ -0.71
PRKCH-208ENST00000553846 MCF2L2Q86YR7 1114 aa10.6□□□□□ -0.71
PRKCH-208ENST00000553846 LMBR1Q8WVP7 490 aa10.6□□□□□ -0.71
PRKCH-208ENST00000553846 PHF7Q9BWX1 381 aaPredicted RBP10.6□□□□□ -0.71
PRKCH-208ENST00000553846 JMJD4Q9H9V9 463 aa10.6□□□□□ -0.71
PRKCH-208ENST00000553846 BARX2Q9UMQ3 279 aaPredicted RBP10.6□□□□□ -0.71
PRKCH-208ENST00000553846 SUPT16HQ9Y5B9 1047 aaKnown RBP10.6□□□□□ -0.71
PRKCH-208ENST00000553846 PCDHGC5Q9Y5F6 944 aa10.6□□□□□ -0.71
PRKCH-208ENST00000553846 CFAP47Q6ZTR5 3102 aa10.59□□□□□ -0.71
PRKCH-208ENST00000553846 A0A0D9SFI3 127 aa10.59□□□□□ -0.71
PRKCH-208ENST00000553846 H0Y858 1186 aa10.59□□□□□ -0.71
PRKCH-208ENST00000553846 ENPP3O14638 875 aa10.59□□□□□ -0.71
PRKCH-208ENST00000553846 GALR2O43603 387 aaPredicted RBP10.59□□□□□ -0.71
PRKCH-208ENST00000553846 SORBS3O60504 671 aa10.59□□□□□ -0.71
PRKCH-208ENST00000553846 HSPD1P10809 573 aaKnown RBP10.59□□□□□ -0.71
PRKCH-208ENST00000553846 RBM10P98175 930 aaKnown RBP10.59□□□□□ -0.71
PRKCH-208ENST00000553846 PGM5Q15124 567 aa10.59□□□□□ -0.71
PRKCH-208ENST00000553846 NAALADL2Q58DX5 795 aa10.59□□□□□ -0.71
PRKCH-208ENST00000553846 KCNV1Q6PIU1 500 aa10.59□□□□□ -0.71
PRKCH-208ENST00000553846 RUFY4Q6ZNE9 571 aa10.59□□□□□ -0.71
PRKCH-208ENST00000553846 ERMP1Q7Z2K6 904 aa10.59□□□□□ -0.71
PRKCH-208ENST00000553846 ZNF589Q86UQ0 364 aaPredicted RBP10.59□□□□□ -0.71
PRKCH-208ENST00000553846 IGFLR1Q9H665 355 aa10.59□□□□□ -0.71
PRKCH-208ENST00000553846 TLR9Q9NR96 1032 aa10.59□□□□□ -0.71
PRKCH-208ENST00000553846 SETD4Q9NVD3 440 aa10.59□□□□□ -0.71
PRKCH-208ENST00000553846 MRPL11Q9Y3B7 192 aaKnown RBP10.59□□□□□ -0.71
PRKCH-208ENST00000553846 TPRP12270 2363 aaKnown RBP10.59□□□□□ -0.71
PRKCH-208ENST00000553846 CCDC171Q6TFL3 1326 aa10.58□□□□□ -0.71
PRKCH-208ENST00000553846 OTOGLQ3ZCN5 2332 aa10.58□□□□□ -0.72
PRKCH-208ENST00000553846 FNDC1Q4ZHG4 1894 aaPredicted RBP10.58□□□□□ -0.72
PRKCH-208ENST00000553846 GHRP10912 638 aa10.58□□□□□ -0.72
PRKCH-208ENST00000553846 PCP11498 1178 aaKnown RBP10.58□□□□□ -0.72
PRKCH-208ENST00000553846 NRIP1P48552 1158 aa10.58□□□□□ -0.72
PRKCH-208ENST00000553846 RRP12Q5JTH9 1297 aaKnown RBP10.58□□□□□ -0.72
PRKCH-208ENST00000553846 FBXO47Q5MNV8 452 aa10.58□□□□□ -0.72
PRKCH-208ENST00000553846 RTN4RL1Q86UN2 441 aaPredicted RBP10.58□□□□□ -0.72
PRKCH-208ENST00000553846 DGKHQ86XP1 1220 aa10.58□□□□□ -0.72
PRKCH-208ENST00000553846 CMTR2Q8IYT2 770 aaKnown RBP10.58□□□□□ -0.72
PRKCH-208ENST00000553846 PNMA1Q8ND90 353 aa10.58□□□□□ -0.72
PRKCH-208ENST00000553846 ATOH1Q92858 354 aaPredicted RBP10.58□□□□□ -0.72
PRKCH-208ENST00000553846 FAM227BQ96M60 508 aa10.58□□□□□ -0.72
PRKCH-208ENST00000553846 INPP4AQ96PE3 977 aaPredicted RBP10.58□□□□□ -0.72
PRKCH-208ENST00000553846 GPR20Q99678 358 aa10.58□□□□□ -0.72
PRKCH-208ENST00000553846 IRF2BPLQ9H1B7 796 aa10.58□□□□□ -0.72
PRKCH-208ENST00000553846 S1PR5Q9H228 398 aa10.58□□□□□ -0.72
PRKCH-208ENST00000553846 AGO3Q9H9G7 860 aaKnown RBP10.58□□□□□ -0.72
PRKCH-208ENST00000553846 LOXHD1Q8IVV2 1947 aa10.57□□□□□ -0.72
PRKCH-208ENST00000553846 MBLAC1A4D2B0 266 aaPredicted RBP10.57□□□□□ -0.72
PRKCH-208ENST00000553846 CSPG5O95196 566 aa10.57□□□□□ -0.72
PRKCH-208ENST00000553846 HAND2P61296 217 aa10.57□□□□□ -0.72
PRKCH-208ENST00000553846 MRPS9P82933 396 aaKnown RBP10.57□□□□□ -0.72
PRKCH-208ENST00000553846 HNRNPUQ00839 825 aaKnown RBP eCLIP10.57□□□□□ -0.72
PRKCH-208ENST00000553846 BTG3Q14201 252 aaPredicted RBP10.57□□□□□ -0.72
PRKCH-208ENST00000553846 ASPRV1Q53RT3 343 aa10.57□□□□□ -0.72
PRKCH-208ENST00000553846 METTL7BQ6UX53 244 aa10.57□□□□□ -0.72
PRKCH-208ENST00000553846 MIER1Q8N108 512 aa10.57□□□□□ -0.72
PRKCH-208ENST00000553846 TMEM105Q8N8V8 129 aa10.57□□□□□ -0.72
PRKCH-208ENST00000553846 KLHL23Q8NBE8 558 aa10.57□□□□□ -0.72
PRKCH-208ENST00000553846 POF1BQ8WVV4 589 aa10.57□□□□□ -0.72
PRKCH-208ENST00000553846 USP26Q9BXU7 913 aa10.57□□□□□ -0.72
PRKCH-208ENST00000553846 HELLSQ9NRZ9 838 aa10.57□□□□□ -0.72
PRKCH-208ENST00000553846 MAP3K20Q9NYL2 800 aaKnown RBP10.57□□□□□ -0.72
PRKCH-208ENST00000553846 U3KPZ7 1027 aaPredicted RBP10.57□□□□□ -0.72
PRKCH-208ENST00000553846 ACACBO00763 2458 aa10.57□□□□□ -0.72
PRKCH-208ENST00000553846 KAT6AQ92794 2004 aa10.57□□□□□ -0.72
PRKCH-208ENST00000553846 MYO10Q9HD67 2058 aa10.56□□□□□ -0.72
PRKCH-208ENST00000553846 SPATA31C2B4DYI2 1134 aa10.56□□□□□ -0.72
PRKCH-208ENST00000553846 FSCN2O14926 492 aa10.56□□□□□ -0.72
PRKCH-208ENST00000553846 CFBP00751 764 aa10.56□□□□□ -0.72
PRKCH-208ENST00000553846 MX1P20591 662 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms