RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 JAK3P52333 1124 aa13.18□□□□□ -0.3
NEK9-202ENST00000553823 ZNF445P59923 1031 aa13.18□□□□□ -0.3
NEK9-202ENST00000553823 SP3Q02447 781 aa13.18□□□□□ -0.3
NEK9-202ENST00000553823 NEDD9Q14511 834 aa13.18□□□□□ -0.3
NEK9-202ENST00000553823 KIF22Q14807 665 aa13.18□□□□□ -0.3
NEK9-202ENST00000553823 POSTNQ15063 836 aa13.18□□□□□ -0.3
NEK9-202ENST00000553823 ECM1Q16610 540 aa13.18□□□□□ -0.3
NEK9-202ENST00000553823 ZNF746Q6NUN9 644 aaPredicted RBP13.18□□□□□ -0.3
NEK9-202ENST00000553823 POTEBQ6S5H4 581 aa13.18□□□□□ -0.3
NEK9-202ENST00000553823 SH3RF1Q7Z6J0 888 aa13.18□□□□□ -0.3
NEK9-202ENST00000553823 CATSPER3Q86XQ3 398 aa13.18□□□□□ -0.3
NEK9-202ENST00000553823 FBXO16Q8IX29 292 aaPredicted RBP13.18□□□□□ -0.3
NEK9-202ENST00000553823 CKAP2LQ8IYA6 745 aa13.18□□□□□ -0.3
NEK9-202ENST00000553823 RDM1Q8NG50 284 aa13.18□□□□□ -0.3
NEK9-202ENST00000553823 NEK9Q8TD19 979 aa13.18□□□□□ -0.3
NEK9-202ENST00000553823 PAGE5Q96GU1 130 aa13.18□□□□□ -0.3
NEK9-202ENST00000553823 HSD17B14Q9BPX1 270 aa13.18□□□□□ -0.3
NEK9-202ENST00000553823 TINF2Q9BSI4 451 aa13.18□□□□□ -0.3
NEK9-202ENST00000553823 MAGEF1Q9HAY2 307 aa13.18□□□□□ -0.3
NEK9-202ENST00000553823 JPH1Q9HDC5 661 aaPredicted RBP13.18□□□□□ -0.3
NEK9-202ENST00000553823 TUFT1Q9NNX1 390 aa13.18□□□□□ -0.3
NEK9-202ENST00000553823 VTA1Q9NP79 307 aa13.18□□□□□ -0.3
NEK9-202ENST00000553823 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.18□□□□□ -0.3
NEK9-202ENST00000553823 SLC9A2Q9UBY0 812 aa13.18□□□□□ -0.3
NEK9-202ENST00000553823 ZSWIM8A7E2V4 1837 aa13.18□□□□□ -0.3
NEK9-202ENST00000553823 SYNGAP1Q96PV0 1343 aa13.17□□□□□ -0.3
NEK9-202ENST00000553823 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.17□□□□□ -0.3
NEK9-202ENST00000553823 WDR64B1ANS9 1081 aa13.17□□□□□ -0.3
NEK9-202ENST00000553823 FOXN1O15353 648 aa13.17□□□□□ -0.3
NEK9-202ENST00000553823 SNAI1O95863 264 aaPredicted RBP13.17□□□□□ -0.3
NEK9-202ENST00000553823 CCNE2O96020 404 aa13.17□□□□□ -0.3
NEK9-202ENST00000553823 SPATA31C1P0DKV0 1188 aa13.17□□□□□ -0.3
NEK9-202ENST00000553823 MUTP22033 750 aa13.17□□□□□ -0.3
NEK9-202ENST00000553823 UBA1P22314 1058 aaKnown RBP13.17□□□□□ -0.3
NEK9-202ENST00000553823 SFNP31947 248 aa13.17□□□□□ -0.3
NEK9-202ENST00000553823 AFMP43652 599 aa13.17□□□□□ -0.3
NEK9-202ENST00000553823 MDM2Q00987 491 aaPredicted RBP13.17□□□□□ -0.3
NEK9-202ENST00000553823 SP2Q02086 613 aa13.17□□□□□ -0.3
NEK9-202ENST00000553823 CYP4A11Q02928 519 aa13.17□□□□□ -0.3
NEK9-202ENST00000553823 PNOCQ13519 176 aa13.17□□□□□ -0.3
NEK9-202ENST00000553823 TTLL4Q14679 1199 aa13.17□□□□□ -0.3
NEK9-202ENST00000553823 KCTD17Q8N5Z5 321 aa13.17□□□□□ -0.3
NEK9-202ENST00000553823 LRRC15Q8TF66 581 aa13.17□□□□□ -0.3
NEK9-202ENST00000553823 SCFD2Q8WU76 684 aa13.17□□□□□ -0.3
NEK9-202ENST00000553823 RAD54LQ92698 747 aa13.17□□□□□ -0.3
NEK9-202ENST00000553823 DYDC2Q96IM9 177 aa13.17□□□□□ -0.3
NEK9-202ENST00000553823 TRIM47Q96LD4 638 aa13.17□□□□□ -0.3
NEK9-202ENST00000553823 APBA2Q99767 749 aa13.17□□□□□ -0.3
NEK9-202ENST00000553823 RGL1Q9NZL6 768 aa13.17□□□□□ -0.3
NEK9-202ENST00000553823 KIAA1468Q9P260 1216 aa13.17□□□□□ -0.3
NEK9-202ENST00000553823 KIAA1024Q9UPX6 916 aa13.17□□□□□ -0.3
NEK9-202ENST00000553823 SAMM50Q9Y512 469 aa13.17□□□□□ -0.3
NEK9-202ENST00000553823 CASP8AP2Q9UKL3 1982 aa13.16□□□□□ -0.3
NEK9-202ENST00000553823 POTEFA5A3E0 1075 aa13.16□□□□□ -0.3
NEK9-202ENST00000553823 SLITRK3O94933 977 aa13.16□□□□□ -0.3
NEK9-202ENST00000553823 HSPA6P17066 643 aa13.16□□□□□ -0.3
NEK9-202ENST00000553823 CYP2B6P20813 491 aa13.16□□□□□ -0.3
NEK9-202ENST00000553823 CTTNQ14247 550 aaKnown RBP13.16□□□□□ -0.3
NEK9-202ENST00000553823 OLFML2BQ68BL8 750 aa13.16□□□□□ -0.3
NEK9-202ENST00000553823 CCDC62Q6P9F0 684 aa13.16□□□□□ -0.3
NEK9-202ENST00000553823 POTEGQ6S5H5 508 aa13.16□□□□□ -0.3
NEK9-202ENST00000553823 LRSAM1Q6UWE0 723 aa13.16□□□□□ -0.3
NEK9-202ENST00000553823 SV2BQ7L1I2 683 aa13.16□□□□□ -0.3
NEK9-202ENST00000553823 CYFIP1Q7L576 1253 aa13.16□□□□□ -0.3
NEK9-202ENST00000553823 TPH2Q8IWU9 490 aa13.16□□□□□ -0.3
NEK9-202ENST00000553823 SMAP1Q8IYB5 467 aaPredicted RBP13.16□□□□□ -0.3
NEK9-202ENST00000553823 GRAMD1CQ8IYS0 662 aa13.16□□□□□ -0.3
NEK9-202ENST00000553823 LARP4BQ92615 738 aaKnown RBP13.16□□□□□ -0.3
NEK9-202ENST00000553823 ARHGAP39Q9C0H5 1083 aa13.16□□□□□ -0.3
NEK9-202ENST00000553823 KATNBL1Q9H079 304 aa13.16□□□□□ -0.3
NEK9-202ENST00000553823 ABHD16BQ9H3Z7 469 aa13.16□□□□□ -0.3
NEK9-202ENST00000553823 BCAS3Q9H6U6 928 aa13.16□□□□□ -0.3
NEK9-202ENST00000553823 BLOC1S4Q9NUP1 217 aa13.16□□□□□ -0.3
NEK9-202ENST00000553823 KBTBD4Q9NVX7 518 aa13.16□□□□□ -0.3
NEK9-202ENST00000553823 DDX41Q9UJV9 622 aaKnown RBP13.16□□□□□ -0.3
NEK9-202ENST00000553823 RBM47A0AV96 593 aaKnown RBP13.15□□□□□ -0.3
NEK9-202ENST00000553823 GTPBP6O43824 516 aaPredicted RBP13.15□□□□□ -0.3
NEK9-202ENST00000553823 FARP2O94887 1054 aaPredicted RBP13.15□□□□□ -0.3
NEK9-202ENST00000553823 SMC2O95347 1197 aa13.15□□□□□ -0.3
NEK9-202ENST00000553823 ARIH2O95376 493 aa13.15□□□□□ -0.3
NEK9-202ENST00000553823 GGPS1O95749 300 aa13.15□□□□□ -0.3
NEK9-202ENST00000553823 MYL1P05976 194 aa13.15□□□□□ -0.3
NEK9-202ENST00000553823 P4HBP07237 508 aaKnown RBP13.15□□□□□ -0.3
NEK9-202ENST00000553823 PRR29P0C7W0 189 aa13.15□□□□□ -0.3
NEK9-202ENST00000553823 TXNP10599 105 aaKnown RBP13.15□□□□□ -0.3
NEK9-202ENST00000553823 XRCC5P13010 732 aaKnown RBP13.15□□□□□ -0.3
NEK9-202ENST00000553823 ACTR2P61160 394 aa13.15□□□□□ -0.3
NEK9-202ENST00000553823 AMPD3Q01432 767 aa13.15□□□□□ -0.3
NEK9-202ENST00000553823 IRF5Q13568 498 aa13.15□□□□□ -0.3
NEK9-202ENST00000553823 MCM6Q14566 821 aa13.15□□□□□ -0.3
NEK9-202ENST00000553823 LY6KQ17RY6 165 aa13.15□□□□□ -0.3
NEK9-202ENST00000553823 TAPT1Q6NXT6 567 aa13.15□□□□□ -0.3
NEK9-202ENST00000553823 SASS6Q6UVJ0 657 aa13.15□□□□□ -0.3
NEK9-202ENST00000553823 METTL7BQ6UX53 244 aa13.15□□□□□ -0.3
NEK9-202ENST00000553823 KCNK18Q7Z418 384 aa13.15□□□□□ -0.3
NEK9-202ENST00000553823 STAMQ92783 540 aa13.15□□□□□ -0.3
NEK9-202ENST00000553823 ERCC4Q92889 916 aaPredicted RBP13.15□□□□□ -0.3
NEK9-202ENST00000553823 MTRQ99707 1265 aa13.15□□□□□ -0.3
NEK9-202ENST00000553823 LXNQ9BS40 222 aa13.15□□□□□ -0.3
NEK9-202ENST00000553823 PDGFCQ9NRA1 345 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms