RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 ZNF512BQ96KM6 892 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-223ENST00000553686 SLC6A18Q96N87 628 aa7.84□□□□□ -1.15
ATXN3-223ENST00000553686 RTFDC1Q9BY42 306 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-223ENST00000553686 C19orf73Q9NVV2 129 aa7.84□□□□□ -1.15
ATXN3-223ENST00000553686 EFR3BQ9Y2G0 817 aa7.84□□□□□ -1.15
ATXN3-223ENST00000553686 PCDHA11Q9Y5I1 949 aa7.84□□□□□ -1.15
ATXN3-223ENST00000553686 SZT2Q5T011 3432 aa7.84□□□□□ -1.15
ATXN3-223ENST00000553686 ACRP10323 421 aa7.83□□□□□ -1.16
ATXN3-223ENST00000553686 TCIRG1Q13488 830 aa7.83□□□□□ -1.16
ATXN3-223ENST00000553686 COL9A2Q14055 689 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-223ENST00000553686 FYB2Q5VWT5 728 aa7.83□□□□□ -1.16
ATXN3-223ENST00000553686 DPP8Q6V1X1 898 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-223ENST00000553686 GPRASP2Q96D09 838 aa7.83□□□□□ -1.16
ATXN3-223ENST00000553686 DHRS1Q96LJ7 313 aa7.83□□□□□ -1.16
ATXN3-223ENST00000553686 SPATA32Q96LK8 384 aa7.83□□□□□ -1.16
ATXN3-223ENST00000553686 CRBNQ96SW2 442 aa7.83□□□□□ -1.16
ATXN3-223ENST00000553686 HTATIP2Q9BUP3 242 aa7.83□□□□□ -1.16
ATXN3-223ENST00000553686 ATP6V0A2Q9Y487 856 aa7.83□□□□□ -1.16
ATXN3-223ENST00000553686 SNED1Q8TER0 1413 aa7.83□□□□□ -1.16
ATXN3-223ENST00000553686 MKI67P46013 3256 aaKnown RBP7.83□□□□□ -1.16
ATXN3-223ENST00000553686 HK2P52789 917 aa7.82□□□□□ -1.16
ATXN3-223ENST00000553686 ZNF790Q6PG37 636 aa7.82□□□□□ -1.16
ATXN3-223ENST00000553686 RUFY4Q6ZNE9 571 aa7.82□□□□□ -1.16
ATXN3-223ENST00000553686 TMC3Q7Z5M5 1100 aa7.82□□□□□ -1.16
ATXN3-223ENST00000553686 DEFB123Q8N688 67 aa7.82□□□□□ -1.16
ATXN3-223ENST00000553686 RBBP8NLQ8NC74 664 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-223ENST00000553686 ZNF428Q96B54 188 aa7.82□□□□□ -1.16
ATXN3-223ENST00000553686 ZNF333Q96JL9 665 aa7.82□□□□□ -1.16
ATXN3-223ENST00000553686 TM9SF2Q99805 663 aa7.82□□□□□ -1.16
ATXN3-223ENST00000553686 PRO3102Q9H379 93 aa7.82□□□□□ -1.16
ATXN3-223ENST00000553686 AFDNP55196 1824 aaKnown RBP7.82□□□□□ -1.16
ATXN3-223ENST00000553686 HEG1Q9ULI3 1381 aa7.82□□□□□ -1.16
ATXN3-223ENST00000553686 SHTN1A0MZ66 631 aa7.81□□□□□ -1.16
ATXN3-223ENST00000553686 UBE2Q2LH0YL09 131 aa7.81□□□□□ -1.16
ATXN3-223ENST00000553686 BBOX1O75936 387 aa7.81□□□□□ -1.16
ATXN3-223ENST00000553686 NF2P35240 595 aa7.81□□□□□ -1.16
ATXN3-223ENST00000553686 TEFQ10587 303 aa7.81□□□□□ -1.16
ATXN3-223ENST00000553686 SNW1Q13573 536 aaKnown RBP7.81□□□□□ -1.16
ATXN3-223ENST00000553686 KCNMB1Q16558 191 aa7.81□□□□□ -1.16
ATXN3-223ENST00000553686 SLC9C1Q4G0N8 1177 aa7.81□□□□□ -1.16
ATXN3-223ENST00000553686 OTUD7BQ6GQQ9 843 aa7.81□□□□□ -1.16
ATXN3-223ENST00000553686 CCDC81Q6ZN84 652 aa7.81□□□□□ -1.16
ATXN3-223ENST00000553686 ZSWIM9Q86XI8 627 aa7.81□□□□□ -1.16
ATXN3-223ENST00000553686 DAGLBQ8NCG7 672 aa7.81□□□□□ -1.16
ATXN3-223ENST00000553686 RASGRP4Q8TDF6 673 aa7.81□□□□□ -1.16
ATXN3-223ENST00000553686 SYTL5Q8TDW5 730 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-223ENST00000553686 KIRREL1Q96J84 757 aa7.81□□□□□ -1.16
ATXN3-223ENST00000553686 TGIF2Q9GZN2 237 aa7.81□□□□□ -1.16
ATXN3-223ENST00000553686 PRDM14Q9GZV8 571 aa7.81□□□□□ -1.16
ATXN3-223ENST00000553686 MKRN2Q9H000 416 aaKnown RBP7.81□□□□□ -1.16
ATXN3-223ENST00000553686 ACBD3Q9H3P7 528 aa7.81□□□□□ -1.16
ATXN3-223ENST00000553686 R3HDMLQ9H3Y0 253 aa7.81□□□□□ -1.16
ATXN3-223ENST00000553686 GGA3Q9NZ52 723 aa7.81□□□□□ -1.16
ATXN3-223ENST00000553686 TMEM59LQ9UK28 342 aa7.81□□□□□ -1.16
ATXN3-223ENST00000553686 FBXL21Q9UKT6 434 aa7.81□□□□□ -1.16
ATXN3-223ENST00000553686 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-223ENST00000553686 CEP290O15078 2479 aa7.8□□□□□ -1.16
ATXN3-223ENST00000553686 SOX9P48436 509 aa7.8□□□□□ -1.16
ATXN3-223ENST00000553686 SP8Q8IXZ3 490 aa7.8□□□□□ -1.16
ATXN3-223ENST00000553686 TAB3Q8N5C8 712 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-223ENST00000553686 SIN3AQ96ST3 1273 aa7.8□□□□□ -1.16
ATXN3-223ENST00000553686 HDAC8Q9BY41 377 aa7.8□□□□□ -1.16
ATXN3-223ENST00000553686 SUCOQ9UBS9 1254 aaKnown RBP7.8□□□□□ -1.16
ATXN3-223ENST00000553686 COL4A5P29400 1685 aa7.79□□□□□ -1.16
ATXN3-223ENST00000553686 TRPM7Q96QT4 1865 aa7.79□□□□□ -1.16
ATXN3-223ENST00000553686 SSU72P8A0A1W2PR75 194 aa7.79□□□□□ -1.16
ATXN3-223ENST00000553686 MANSC4A6NHS7 340 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-223ENST00000553686 PSMD14O00487 310 aa7.79□□□□□ -1.16
ATXN3-223ENST00000553686 RAC2P15153 192 aa7.79□□□□□ -1.16
ATXN3-223ENST00000553686 GJA8P48165 433 aa7.79□□□□□ -1.16
ATXN3-223ENST00000553686 ERVFC1P60507 584 aa7.79□□□□□ -1.16
ATXN3-223ENST00000553686 SP3Q02447 781 aa7.79□□□□□ -1.16
ATXN3-223ENST00000553686 AUHQ13825 339 aaKnown RBP7.79□□□□□ -1.16
ATXN3-223ENST00000553686 TMEM67Q5HYA8 995 aa7.79□□□□□ -1.16
ATXN3-223ENST00000553686 UNC5AQ6ZN44 842 aa7.79□□□□□ -1.16
ATXN3-223ENST00000553686 ARMC9Q7Z3E5 817 aa7.79□□□□□ -1.16
ATXN3-223ENST00000553686 ZNF655Q8N720 491 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-223ENST00000553686 FAM122AQ96E09 287 aa7.79□□□□□ -1.16
ATXN3-223ENST00000553686 TCTN2Q96GX1 697 aa7.79□□□□□ -1.16
ATXN3-223ENST00000553686 INPP5FQ9Y2H2 1132 aa7.79□□□□□ -1.16
ATXN3-223ENST00000553686 COL6A3P12111 3177 aa7.78□□□□□ -1.16
ATXN3-223ENST00000553686 WTIPA6NIX2 430 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-223ENST00000553686 YDJCA8MPS7 323 aa7.78□□□□□ -1.16
ATXN3-223ENST00000553686 PRAMEF1O95521 474 aa7.78□□□□□ -1.16
ATXN3-223ENST00000553686 ZGLP1P0C6A0 271 aa7.78□□□□□ -1.16
ATXN3-223ENST00000553686 GUCY2CP25092 1073 aa7.78□□□□□ -1.16
ATXN3-223ENST00000553686 NASPP49321 788 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-223ENST00000553686 TEKQ02763 1124 aa7.78□□□□□ -1.16
ATXN3-223ENST00000553686 OGFOD2Q6N063 350 aa7.78□□□□□ -1.16
ATXN3-223ENST00000553686 LSRQ86X29 649 aaPredicted RBP7.78□□□□□ -1.16
ATXN3-223ENST00000553686 CCDC144CPQ8IYA2 1237 aa7.78□□□□□ -1.16
ATXN3-223ENST00000553686 ABHD4Q8TB40 342 aa7.78□□□□□ -1.16
ATXN3-223ENST00000553686 CD99L2Q8TCZ2 262 aa7.78□□□□□ -1.16
ATXN3-223ENST00000553686 MYLIPQ8WY64 445 aa7.78□□□□□ -1.16
ATXN3-223ENST00000553686 DHX38Q92620 1227 aaKnown RBP7.78□□□□□ -1.16
ATXN3-223ENST00000553686 CCSER2Q9H7U1 834 aa7.78□□□□□ -1.16
ATXN3-223ENST00000553686 MTMR10Q9NXD2 777 aa7.78□□□□□ -1.16
ATXN3-223ENST00000553686 MINPP1Q9UNW1 487 aa7.78□□□□□ -1.16
ATXN3-223ENST00000553686 PCDHB12Q9Y5F1 795 aa7.78□□□□□ -1.16
ATXN3-223ENST00000553686 USP16Q9Y5T5 823 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms