RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 LBHD1Q9BQE6 289 aaPredicted RBP25.86■■□□□ 1.73
TDP1-206ENST00000553569 TUT1Q9H6E5 874 aaKnown RBP25.86■■□□□ 1.73
TDP1-206ENST00000553569 HDAC6Q9UBN7 1215 aa25.86■■□□□ 1.73
TDP1-206ENST00000553569 DDX25Q9UHL0 483 aaKnown RBP25.86■■□□□ 1.73
TDP1-206ENST00000553569 TCEAL9Q9UHQ7 104 aa25.86■■□□□ 1.73
TDP1-206ENST00000553569 TBX21Q9UL17 535 aa25.86■■□□□ 1.73
TDP1-206ENST00000553569 ZNF215Q9UL58 517 aaPredicted RBP25.86■■□□□ 1.73
TDP1-206ENST00000553569 SMC3Q9UQE7 1217 aa25.86■■□□□ 1.73
TDP1-206ENST00000553569 CYP3A7-CYP3A51PA0A087WV96 503 aa25.85■■□□□ 1.73
TDP1-206ENST00000553569 KIAA0355O15063 1070 aa25.85■■□□□ 1.73
TDP1-206ENST00000553569 DHX15O43143 795 aaKnown RBP25.85■■□□□ 1.73
TDP1-206ENST00000553569 CCNE2O96020 404 aa25.85■■□□□ 1.73
TDP1-206ENST00000553569 RAG1P15918 1043 aa25.85■■□□□ 1.73
TDP1-206ENST00000553569 CYP3A7P24462 503 aa25.85■■□□□ 1.73
TDP1-206ENST00000553569 PTPN11Q06124 597 aaPredicted RBP25.85■■□□□ 1.73
TDP1-206ENST00000553569 Q4G0T1 1027 aa25.85■■□□□ 1.73
TDP1-206ENST00000553569 MOXD1Q6UVY6 613 aa25.85■■□□□ 1.73
TDP1-206ENST00000553569 GJA10Q969M2 543 aa25.85■■□□□ 1.73
TDP1-206ENST00000553569 TBC1D22BQ9NU19 505 aa25.85■■□□□ 1.73
TDP1-206ENST00000553569 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.85■■□□□ 1.73
TDP1-206ENST00000553569 SLC37A4O43826 429 aa25.84■■□□□ 1.73
TDP1-206ENST00000553569 CCNT1O60563 726 aaKnown RBP25.84■■□□□ 1.73
TDP1-206ENST00000553569 ITGB8P26012 769 aa25.84■■□□□ 1.73
TDP1-206ENST00000553569 MARK3P27448 753 aa25.84■■□□□ 1.73
TDP1-206ENST00000553569 GNL2Q13823 731 aaKnown RBP25.84■■□□□ 1.73
TDP1-206ENST00000553569 GDF6Q6KF10 455 aaPredicted RBP25.84■■□□□ 1.73
TDP1-206ENST00000553569 GLG1Q92896 1179 aa25.84■■□□□ 1.73
TDP1-206ENST00000553569 MBOAT7Q96N66 472 aa25.84■■□□□ 1.73
TDP1-206ENST00000553569 PPP1R12CQ9BZL4 782 aa25.84■■□□□ 1.73
TDP1-206ENST00000553569 NOD1Q9Y239 953 aa25.84■■□□□ 1.73
TDP1-206ENST00000553569 SUPT20HL2P0C7V6 817 aa25.83■■□□□ 1.73
TDP1-206ENST00000553569 CYP2C9P11712 490 aa25.83■■□□□ 1.73
TDP1-206ENST00000553569 SESTD1Q86VW0 696 aa25.83■■□□□ 1.73
TDP1-206ENST00000553569 BADQ92934 168 aa25.83■■□□□ 1.73
TDP1-206ENST00000553569 GTF2IRD1Q9UHL9 959 aa25.83■■□□□ 1.73
TDP1-206ENST00000553569 EMSYQ7Z589 1322 aa25.83■■□□□ 1.73
TDP1-206ENST00000553569 GAS7O60861 476 aa25.82■■□□□ 1.72
TDP1-206ENST00000553569 SMIM10L2AP0DMW4 78 aa25.82■■□□□ 1.72
TDP1-206ENST00000553569 SMIM10L2BP0DMW5 78 aa25.82■■□□□ 1.72
TDP1-206ENST00000553569 GCFC2P16383 781 aaKnown RBP25.82■■□□□ 1.72
TDP1-206ENST00000553569 CUL4AQ13619 759 aa25.82■■□□□ 1.72
TDP1-206ENST00000553569 PTGISQ16647 500 aa25.82■■□□□ 1.72
TDP1-206ENST00000553569 LRCH2Q5VUJ6 765 aa25.82■■□□□ 1.72
TDP1-206ENST00000553569 SLC5A5Q92911 643 aa25.82■■□□□ 1.72
TDP1-206ENST00000553569 PCYT2Q99447 389 aa25.82■■□□□ 1.72
TDP1-206ENST00000553569 NAP1L4Q99733 375 aaKnown RBP25.82■■□□□ 1.72
TDP1-206ENST00000553569 HIPK3Q9H422 1215 aa25.82■■□□□ 1.72
TDP1-206ENST00000553569 AZI2Q9H6S1 392 aa25.82■■□□□ 1.72
TDP1-206ENST00000553569 CHMP2AO43633 222 aa25.81■■□□□ 1.72
TDP1-206ENST00000553569 LGR5O75473 907 aa25.81■■□□□ 1.72
TDP1-206ENST00000553569 KRT76Q01546 638 aa25.81■■□□□ 1.72
TDP1-206ENST00000553569 PPP4R3AQ6IN85 833 aa25.81■■□□□ 1.72
TDP1-206ENST00000553569 ZNF746Q6NUN9 644 aaPredicted RBP25.81■■□□□ 1.72
TDP1-206ENST00000553569 ETNPPLQ8TBG4 499 aa25.81■■□□□ 1.72
TDP1-206ENST00000553569 TEKT3Q9BXF9 490 aa25.81■■□□□ 1.72
TDP1-206ENST00000553569 FOXP1Q9H334 677 aaPredicted RBP25.81■■□□□ 1.72
TDP1-206ENST00000553569 SMARCAD1Q9H4L7 1026 aa25.81■■□□□ 1.72
TDP1-206ENST00000553569 TRIP12Q14669 1992 aaPredicted RBP25.81■■□□□ 1.72
TDP1-206ENST00000553569 K7ELQ4 463 aaPredicted RBP25.8■■□□□ 1.72
TDP1-206ENST00000553569 BACH1O14867 736 aa25.8■■□□□ 1.72
TDP1-206ENST00000553569 TIMP1P01033 207 aa25.8■■□□□ 1.72
TDP1-206ENST00000553569 ATP2B1P20020 1258 aa25.8■■□□□ 1.72
TDP1-206ENST00000553569 ZNF200P98182 395 aaPredicted RBP25.8■■□□□ 1.72
TDP1-206ENST00000553569 MIS18BP1Q6P0N0 1132 aa25.8■■□□□ 1.72
TDP1-206ENST00000553569 POTEDQ86YR6 584 aa25.8■■□□□ 1.72
TDP1-206ENST00000553569 RIT2Q99578 217 aa25.8■■□□□ 1.72
TDP1-206ENST00000553569 GDF15Q99988 308 aa25.8■■□□□ 1.72
TDP1-206ENST00000553569 NOC4LQ9BVI4 516 aaKnown RBP25.8■■□□□ 1.72
TDP1-206ENST00000553569 ERAP1Q9NZ08 941 aa25.8■■□□□ 1.72
TDP1-206ENST00000553569 COLQQ9Y215 455 aaPredicted RBP25.8■■□□□ 1.72
TDP1-206ENST00000553569 UMODL1Q5DID0 1318 aa25.8■■□□□ 1.72
TDP1-206ENST00000553569 C17orf102A2RUQ5 167 aa25.79■■□□□ 1.72
TDP1-206ENST00000553569 KIF28PB7ZC32 967 aa25.79■■□□□ 1.72
TDP1-206ENST00000553569 WNT7AO00755 349 aa25.79■■□□□ 1.72
TDP1-206ENST00000553569 ATG7O95352 703 aa25.79■■□□□ 1.72
TDP1-206ENST00000553569 CYP2C18P33260 490 aa25.79■■□□□ 1.72
TDP1-206ENST00000553569 HIC1Q14526 733 aa25.79■■□□□ 1.72
TDP1-206ENST00000553569 ABHD15Q6UXT9 468 aa25.79■■□□□ 1.72
TDP1-206ENST00000553569 RNPEPQ9H4A4 650 aa25.79■■□□□ 1.72
TDP1-206ENST00000553569 SAMM50Q9Y512 469 aa25.79■■□□□ 1.72
TDP1-206ENST00000553569 H3BQV1 296 aa25.78■■□□□ 1.72
TDP1-206ENST00000553569 STAT5BP51692 787 aa25.78■■□□□ 1.72
TDP1-206ENST00000553569 CCDC60Q8IWA6 550 aaPredicted RBP25.78■■□□□ 1.72
TDP1-206ENST00000553569 SMAP1Q8IYB5 467 aaPredicted RBP25.78■■□□□ 1.72
TDP1-206ENST00000553569 UBE2OQ9C0C9 1292 aaKnown RBP25.78■■□□□ 1.72
TDP1-206ENST00000553569 UNC45AQ9H3U1 944 aa25.78■■□□□ 1.72
TDP1-206ENST00000553569 KAT6AQ92794 2004 aa25.78■■□□□ 1.72
TDP1-206ENST00000553569 WDR64B1ANS9 1081 aa25.77■■□□□ 1.72
TDP1-206ENST00000553569 MARCH6O60337 910 aa25.77■■□□□ 1.72
TDP1-206ENST00000553569 PSMD10O75832 226 aa25.77■■□□□ 1.72
TDP1-206ENST00000553569 FAM160B1Q5W0V3 765 aa25.77■■□□□ 1.72
TDP1-206ENST00000553569 MCTP1Q6DN14 999 aa25.77■■□□□ 1.72
TDP1-206ENST00000553569 NOSTRINQ8IVI9 506 aa25.77■■□□□ 1.72
TDP1-206ENST00000553569 HSCBQ8IWL3 235 aa25.77■■□□□ 1.72
TDP1-206ENST00000553569 CTAGE1Q96RT6 745 aa25.77■■□□□ 1.72
TDP1-206ENST00000553569 KCNMB3Q9NPA1 279 aa25.77■■□□□ 1.72
TDP1-206ENST00000553569 ZNF302Q9NR11 478 aa25.77■■□□□ 1.72
TDP1-206ENST00000553569 FOXD4L1Q9NU39 408 aa25.77■■□□□ 1.72
TDP1-206ENST00000553569 SETD4Q9NVD3 440 aa25.77■■□□□ 1.72
TDP1-206ENST00000553569 TRPC6Q9Y210 931 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms