RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 WWC2Q6AWC2 1192 aa17.33■□□□□ 0.36
SDR39U1-205ENST00000553546 TRIM50Q86XT4 487 aa17.33■□□□□ 0.36
SDR39U1-205ENST00000553546 CCDC136Q96JN2 1154 aa17.33■□□□□ 0.36
SDR39U1-205ENST00000553546 TCEANC2Q96MN5 208 aa17.33■□□□□ 0.36
SDR39U1-205ENST00000553546 GLT8D2Q9H1C3 349 aa17.33■□□□□ 0.36
SDR39U1-205ENST00000553546 BRPF3Q9ULD4 1205 aa17.33■□□□□ 0.36
SDR39U1-205ENST00000553546 NRCAMQ92823 1304 aa17.32■□□□□ 0.36
SDR39U1-205ENST00000553546 KLF18A0A0U1RQI7 1052 aa17.32■□□□□ 0.36
SDR39U1-205ENST00000553546 CCDC196A0A1B0GTZ2 297 aa17.32■□□□□ 0.36
SDR39U1-205ENST00000553546 TREHO43280 583 aa17.32■□□□□ 0.36
SDR39U1-205ENST00000553546 POU3F3P20264 500 aaPredicted RBP17.32■□□□□ 0.36
SDR39U1-205ENST00000553546 TCF7P36402 384 aaPredicted RBP17.32■□□□□ 0.36
SDR39U1-205ENST00000553546 DEFB103AP81534 67 aa17.32■□□□□ 0.36
SDR39U1-205ENST00000553546 MBTPS1Q14703 1052 aa17.32■□□□□ 0.36
SDR39U1-205ENST00000553546 SEPT1Q8WYJ6 367 aa17.32■□□□□ 0.36
SDR39U1-205ENST00000553546 RIC8AQ9NPQ8 531 aa17.32■□□□□ 0.36
SDR39U1-205ENST00000553546 JADE2Q9NQC1 790 aa17.32■□□□□ 0.36
SDR39U1-205ENST00000553546 SETD4Q9NVD3 440 aa17.32■□□□□ 0.36
SDR39U1-205ENST00000553546 GJB5O95377 273 aa17.31■□□□□ 0.36
SDR39U1-205ENST00000553546 ADCY7P51828 1080 aa17.31■□□□□ 0.36
SDR39U1-205ENST00000553546 ARHGAP4P98171 946 aa17.31■□□□□ 0.36
SDR39U1-205ENST00000553546 FUT2Q10981 343 aa17.31■□□□□ 0.36
SDR39U1-205ENST00000553546 CCDC85BQ15834 202 aaPredicted RBP17.31■□□□□ 0.36
SDR39U1-205ENST00000553546 RAD9AQ99638 391 aa17.31■□□□□ 0.36
SDR39U1-205ENST00000553546 ERAP1Q9NZ08 941 aa17.31■□□□□ 0.36
SDR39U1-205ENST00000553546 V9GY48 417 aaPredicted RBP17.31■□□□□ 0.36
SDR39U1-205ENST00000553546 MICAL3Q7RTP6 2002 aa17.31■□□□□ 0.36
SDR39U1-205ENST00000553546 ATP9AO75110 1047 aa17.3■□□□□ 0.36
SDR39U1-205ENST00000553546 AMHP03971 560 aa17.3■□□□□ 0.36
SDR39U1-205ENST00000553546 ADAM17P78536 824 aa17.3■□□□□ 0.36
SDR39U1-205ENST00000553546 AP3B2Q13367 1082 aa17.3■□□□□ 0.36
SDR39U1-205ENST00000553546 PLEKHG4Q58EX7 1191 aa17.3■□□□□ 0.36
SDR39U1-205ENST00000553546 TAF2Q6P1X5 1199 aa17.3■□□□□ 0.36
SDR39U1-205ENST00000553546 DBF4BQ8NFT6 615 aa17.3■□□□□ 0.36
SDR39U1-205ENST00000553546 LMBR1Q8WVP7 490 aa17.3■□□□□ 0.36
SDR39U1-205ENST00000553546 ARNTL2Q8WYA1 636 aa17.3■□□□□ 0.36
SDR39U1-205ENST00000553546 SEPT8Q92599 483 aa17.3■□□□□ 0.36
SDR39U1-205ENST00000553546 KCNB2Q92953 911 aa17.3■□□□□ 0.36
SDR39U1-205ENST00000553546 MXRA8Q9BRK3 442 aa17.3■□□□□ 0.36
SDR39U1-205ENST00000553546 SMARCAD1Q9H4L7 1026 aa17.3■□□□□ 0.36
SDR39U1-205ENST00000553546 BARHL2Q9NY43 387 aa17.3■□□□□ 0.36
SDR39U1-205ENST00000553546 NAP1L2Q9ULW6 460 aaPredicted RBP17.3■□□□□ 0.36
SDR39U1-205ENST00000553546 STXBP3O00186 592 aa17.29■□□□□ 0.36
SDR39U1-205ENST00000553546 REC8O95072 547 aa17.29■□□□□ 0.36
SDR39U1-205ENST00000553546 RPLP2P05387 115 aaKnown RBP17.29■□□□□ 0.36
SDR39U1-205ENST00000553546 CTSHP09668 335 aa17.29■□□□□ 0.36
SDR39U1-205ENST00000553546 HSPA4P34932 840 aa17.29■□□□□ 0.36
SDR39U1-205ENST00000553546 METAP2P50579 478 aaKnown RBP eCLIP17.29■□□□□ 0.36
SDR39U1-205ENST00000553546 TCTN1Q2MV58 587 aa17.29■□□□□ 0.36
SDR39U1-205ENST00000553546 TYW1BQ6NUM6 668 aa17.29■□□□□ 0.36
SDR39U1-205ENST00000553546 BLOC1S2Q6QNY1 142 aa17.29■□□□□ 0.36
SDR39U1-205ENST00000553546 MICALL1Q8N3F8 863 aa17.29■□□□□ 0.36
SDR39U1-205ENST00000553546 APBB2Q92870 758 aa17.29■□□□□ 0.36
SDR39U1-205ENST00000553546 GLG1Q92896 1179 aa17.29■□□□□ 0.36
SDR39U1-205ENST00000553546 TNPO1Q92973 898 aaKnown RBP17.29■□□□□ 0.36
SDR39U1-205ENST00000553546 SDF4Q9BRK5 362 aa17.29■□□□□ 0.36
SDR39U1-205ENST00000553546 ANO3Q9BYT9 981 aa17.29■□□□□ 0.36
SDR39U1-205ENST00000553546 CERS4Q9HA82 394 aa17.29■□□□□ 0.36
SDR39U1-205ENST00000553546 JPH1Q9HDC5 661 aaPredicted RBP17.29■□□□□ 0.36
SDR39U1-205ENST00000553546 PKD2L1Q9P0L9 805 aa17.29■□□□□ 0.36
SDR39U1-205ENST00000553546 NFASCO94856 1347 aa17.28■□□□□ 0.36
SDR39U1-205ENST00000553546 GSTTP1A0A1W2PQM5 241 aa17.28■□□□□ 0.36
SDR39U1-205ENST00000553546 SMCO2A6NFE2 343 aa17.28■□□□□ 0.36
SDR39U1-205ENST00000553546 ARHGEF15O94989 841 aa17.28■□□□□ 0.36
SDR39U1-205ENST00000553546 CDC27P30260 824 aa17.28■□□□□ 0.36
SDR39U1-205ENST00000553546 PPFIA1Q13136 1202 aa17.28■□□□□ 0.36
SDR39U1-205ENST00000553546 FAM26DQ5JW98 314 aa17.28■□□□□ 0.36
SDR39U1-205ENST00000553546 MCTP2Q6DN12 878 aa17.28■□□□□ 0.36
SDR39U1-205ENST00000553546 RPAINQ86UA6 219 aa17.28■□□□□ 0.36
SDR39U1-205ENST00000553546 RSPH3Q86UC2 560 aa17.28■□□□□ 0.36
SDR39U1-205ENST00000553546 IL27Q8NEV9 243 aa17.28■□□□□ 0.36
SDR39U1-205ENST00000553546 CCDC12Q8WUD4 166 aaPredicted RBP17.28■□□□□ 0.36
SDR39U1-205ENST00000553546 JAKMIP1Q96N16 626 aaKnown RBP17.28■□□□□ 0.36
SDR39U1-205ENST00000553546 AZI2Q9H6S1 392 aa17.28■□□□□ 0.36
SDR39U1-205ENST00000553546 KCNH7Q9NS40 1196 aa17.28■□□□□ 0.36
SDR39U1-205ENST00000553546 FAM217BQ9NTX9 383 aaPredicted RBP17.28■□□□□ 0.36
SDR39U1-205ENST00000553546 SLC9A2Q9UBY0 812 aa17.28■□□□□ 0.36
SDR39U1-205ENST00000553546 TELO2Q9Y4R8 837 aa17.28■□□□□ 0.36
SDR39U1-205ENST00000553546 INSL6Q9Y581 213 aa17.28■□□□□ 0.36
SDR39U1-205ENST00000553546 MTCH2Q9Y6C9 303 aa17.28■□□□□ 0.36
SDR39U1-205ENST00000553546 LCHNA4D1U4 455 aa17.27■□□□□ 0.36
SDR39U1-205ENST00000553546 EPOPA6NHQ4 379 aa17.27■□□□□ 0.36
SDR39U1-205ENST00000553546 RFXAPO00287 272 aa17.27■□□□□ 0.36
SDR39U1-205ENST00000553546 PSMA5P28066 241 aa17.27■□□□□ 0.36
SDR39U1-205ENST00000553546 SREBF1P36956 1147 aa17.27■□□□□ 0.36
SDR39U1-205ENST00000553546 MKRN4PQ13434 485 aaPredicted RBP17.27■□□□□ 0.36
SDR39U1-205ENST00000553546 GRIK4Q16099 956 aa17.27■□□□□ 0.36
SDR39U1-205ENST00000553546 PFKFB3Q16875 520 aaPredicted RBP17.27■□□□□ 0.36
SDR39U1-205ENST00000553546 CEP55Q53EZ4 464 aa17.27■□□□□ 0.36
SDR39U1-205ENST00000553546 Q6ZUG5 572 aa17.27■□□□□ 0.36
SDR39U1-205ENST00000553546 TMCO2Q7Z6W1 182 aaPredicted RBP17.27■□□□□ 0.36
SDR39U1-205ENST00000553546 MYOCDQ8IZQ8 938 aa17.27■□□□□ 0.36
SDR39U1-205ENST00000553546 FBXL16Q8N461 479 aa17.27■□□□□ 0.36
SDR39U1-205ENST00000553546 TGS1Q96RS0 853 aaKnown RBP17.27■□□□□ 0.36
SDR39U1-205ENST00000553546 C1QTNF1Q9BXJ1 281 aa17.27■□□□□ 0.36
SDR39U1-205ENST00000553546 TUBE1Q9UJT0 475 aa17.27■□□□□ 0.36
SDR39U1-205ENST00000553546 SNX14Q9Y5W7 946 aa17.27■□□□□ 0.36
SDR39U1-205ENST00000553546 NID2Q14112 1375 aa17.27■□□□□ 0.35
SDR39U1-205ENST00000553546 PRRC2BQ5JSZ5 2229 aaKnown RBP17.27■□□□□ 0.35
SDR39U1-205ENST00000553546 COL4A4P53420 1690 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms