RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 RSPH10B2B2RC85 870 aa18.16■□□□□ 0.5
CDK4-215ENST00000553237 MAFGO15525 162 aa18.16■□□□□ 0.5
CDK4-215ENST00000553237 CA3P07451 260 aa18.16■□□□□ 0.5
CDK4-215ENST00000553237 RSPH10BP0C881 870 aa18.16■□□□□ 0.5
CDK4-215ENST00000553237 ARP10275 920 aa18.16■□□□□ 0.5
CDK4-215ENST00000553237 GNAT1P11488 350 aa18.16■□□□□ 0.5
CDK4-215ENST00000553237 IGFBP4P22692 258 aa18.16■□□□□ 0.5
CDK4-215ENST00000553237 MARK3P27448 753 aa18.16■□□□□ 0.5
CDK4-215ENST00000553237 WDR5P61964 334 aaKnown RBP18.16■□□□□ 0.5
CDK4-215ENST00000553237 CCT2P78371 535 aaKnown RBP18.16■□□□□ 0.5
CDK4-215ENST00000553237 ARHGAP4P98171 946 aa18.16■□□□□ 0.5
CDK4-215ENST00000553237 ADGRE1Q14246 886 aa18.16■□□□□ 0.5
CDK4-215ENST00000553237 FBXL16Q8N461 479 aa18.16■□□□□ 0.5
CDK4-215ENST00000553237 PPM1EQ8WY54 764 aa18.16■□□□□ 0.5
CDK4-215ENST00000553237 AGXT2Q9BYV1 514 aa18.16■□□□□ 0.5
CDK4-215ENST00000553237 KCNH7Q9NS40 1196 aa18.16■□□□□ 0.5
CDK4-215ENST00000553237 GBF1Q92538 1859 aa18.16■□□□□ 0.5
CDK4-215ENST00000553237 ADAMTS3O15072 1205 aa18.15■□□□□ 0.5
CDK4-215ENST00000553237 PRPF3O43395 683 aaKnown RBP18.15■□□□□ 0.5
CDK4-215ENST00000553237 CTSHP09668 335 aa18.15■□□□□ 0.5
CDK4-215ENST00000553237 ZNF76P36508 570 aa18.15■□□□□ 0.5
CDK4-215ENST00000553237 CLK2P49760 499 aaKnown RBP18.15■□□□□ 0.5
CDK4-215ENST00000553237 DEFB103AP81534 67 aa18.15■□□□□ 0.5
CDK4-215ENST00000553237 PKN1Q16512 942 aa18.15■□□□□ 0.5
CDK4-215ENST00000553237 CEP55Q53EZ4 464 aa18.15■□□□□ 0.5
CDK4-215ENST00000553237 RUFY3Q7L099 469 aa18.15■□□□□ 0.5
CDK4-215ENST00000553237 USP38Q8NB14 1042 aa18.15■□□□□ 0.5
CDK4-215ENST00000553237 LMBR1Q8WVP7 490 aa18.15■□□□□ 0.5
CDK4-215ENST00000553237 GLG1Q92896 1179 aa18.15■□□□□ 0.5
CDK4-215ENST00000553237 LARP6Q9BRS8 491 aaKnown RBP18.15■□□□□ 0.5
CDK4-215ENST00000553237 GLT8D2Q9H1C3 349 aa18.15■□□□□ 0.5
CDK4-215ENST00000553237 CERS4Q9HA82 394 aa18.15■□□□□ 0.5
CDK4-215ENST00000553237 NCOA5Q9HCD5 579 aaKnown RBP18.15■□□□□ 0.5
CDK4-215ENST00000553237 KIF28PB7ZC32 967 aa18.14■□□□□ 0.49
CDK4-215ENST00000553237 LGR5O75473 907 aa18.14■□□□□ 0.49
CDK4-215ENST00000553237 PDIA3P30101 505 aaKnown RBP18.14■□□□□ 0.49
CDK4-215ENST00000553237 SREBF1P36956 1147 aa18.14■□□□□ 0.49
CDK4-215ENST00000553237 AKAP17AQ02040 695 aaKnown RBP18.14■□□□□ 0.49
CDK4-215ENST00000553237 AP3B2Q13367 1082 aa18.14■□□□□ 0.49
CDK4-215ENST00000553237 IKBKEQ14164 716 aa18.14■□□□□ 0.49
CDK4-215ENST00000553237 TEX2Q8IWB9 1127 aa18.14■□□□□ 0.49
CDK4-215ENST00000553237 DBF4BQ8NFT6 615 aa18.14■□□□□ 0.49
CDK4-215ENST00000553237 OSBPL7Q9BZF2 842 aa18.14■□□□□ 0.49
CDK4-215ENST00000553237 ZSWIM6Q9HCJ5 1215 aa18.14■□□□□ 0.49
CDK4-215ENST00000553237 JPH1Q9HDC5 661 aaPredicted RBP18.14■□□□□ 0.49
CDK4-215ENST00000553237 SLC9A2Q9UBY0 812 aa18.14■□□□□ 0.49
CDK4-215ENST00000553237 ABHD14A-ACY1A0A1B0GW23 586 aa18.13■□□□□ 0.49
CDK4-215ENST00000553237 RFXAPO00287 272 aa18.13■□□□□ 0.49
CDK4-215ENST00000553237 TLL1O43897 1013 aa18.13■□□□□ 0.49
CDK4-215ENST00000553237 ARHGEF15O94989 841 aa18.13■□□□□ 0.49
CDK4-215ENST00000553237 ADAM17P78536 824 aa18.13■□□□□ 0.49
CDK4-215ENST00000553237 PPFIA1Q13136 1202 aa18.13■□□□□ 0.49
CDK4-215ENST00000553237 TOB2Q14106 344 aaPredicted RBP18.13■□□□□ 0.49
CDK4-215ENST00000553237 NTRK3Q16288 839 aa18.13■□□□□ 0.49
CDK4-215ENST00000553237 UIMC1Q96RL1 719 aa18.13■□□□□ 0.49
CDK4-215ENST00000553237 SDF4Q9BRK5 362 aa18.13■□□□□ 0.49
CDK4-215ENST00000553237 ZBED2Q9BTP6 218 aa18.13■□□□□ 0.49
CDK4-215ENST00000553237 SLC26A6Q9BXS9 759 aa18.13■□□□□ 0.49
CDK4-215ENST00000553237 UPF3BQ9BZI7 483 aaKnown RBP18.13■□□□□ 0.49
CDK4-215ENST00000553237 ZMYND12Q9H0C1 365 aa18.13■□□□□ 0.49
CDK4-215ENST00000553237 SMARCAD1Q9H4L7 1026 aa18.13■□□□□ 0.49
CDK4-215ENST00000553237 AGO4Q9HCK5 861 aaKnown RBP18.13■□□□□ 0.49
CDK4-215ENST00000553237 C6orf50Q9HD87 102 aa18.13■□□□□ 0.49
CDK4-215ENST00000553237 ERAP1Q9NZ08 941 aa18.13■□□□□ 0.49
CDK4-215ENST00000553237 CYP46A1Q9Y6A2 500 aa18.13■□□□□ 0.49
CDK4-215ENST00000553237 EMSYQ7Z589 1322 aa18.13■□□□□ 0.49
CDK4-215ENST00000553237 NRCAMQ92823 1304 aa18.13■□□□□ 0.49
CDK4-215ENST00000553237 NID2Q14112 1375 aa18.13■□□□□ 0.49
CDK4-215ENST00000553237 CHD9Q3L8U1 2897 aa18.13■□□□□ 0.49
CDK4-215ENST00000553237 MEIS1O00470 390 aa18.12■□□□□ 0.49
CDK4-215ENST00000553237 EPB41L2O43491 1005 aaKnown RBP18.12■□□□□ 0.49
CDK4-215ENST00000553237 ITGB3BPQ13352 177 aaPredicted RBP18.12■□□□□ 0.49
CDK4-215ENST00000553237 CCDC85BQ15834 202 aaPredicted RBP18.12■□□□□ 0.49
CDK4-215ENST00000553237 FAM117BQ6P1L5 589 aa18.12■□□□□ 0.49
CDK4-215ENST00000553237 RUFY4Q6ZNE9 571 aa18.12■□□□□ 0.49
CDK4-215ENST00000553237 PCYT2Q99447 389 aa18.12■□□□□ 0.49
CDK4-215ENST00000553237 A0A0C4DFX4 3053 aa18.12■□□□□ 0.49
CDK4-215ENST00000553237 ESYT2A0FGR8 921 aa18.11■□□□□ 0.49
CDK4-215ENST00000553237 FAM86B1E9PN63 330 aa18.11■□□□□ 0.49
CDK4-215ENST00000553237 DDX39AO00148 427 aaKnown RBP18.11■□□□□ 0.49
CDK4-215ENST00000553237 FAM86B2P0C5J1 330 aa18.11■□□□□ 0.49
CDK4-215ENST00000553237 IFNAR1P17181 557 aa18.11■□□□□ 0.49
CDK4-215ENST00000553237 EVCP57679 992 aa18.11■□□□□ 0.49
CDK4-215ENST00000553237 ACTR2P61160 394 aa18.11■□□□□ 0.49
CDK4-215ENST00000553237 IGBP1P78318 339 aa18.11■□□□□ 0.49
CDK4-215ENST00000553237 TAP1Q03518 808 aa18.11■□□□□ 0.49
CDK4-215ENST00000553237 GRIK4Q16099 956 aa18.11■□□□□ 0.49
CDK4-215ENST00000553237 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.11■□□□□ 0.494e-6■□□□□ 9.6
CDK4-215ENST00000553237 PLA2G4DQ86XP0 818 aa18.11■□□□□ 0.49
CDK4-215ENST00000553237 RASGRP4Q8TDF6 673 aa18.11■□□□□ 0.49
CDK4-215ENST00000553237 CCDC12Q8WUD4 166 aaPredicted RBP18.11■□□□□ 0.49
CDK4-215ENST00000553237 PRDM6Q9NQX0 595 aa18.11■□□□□ 0.49
CDK4-215ENST00000553237 NFASCO94856 1347 aa18.11■□□□□ 0.49
CDK4-215ENST00000553237 LCHNA4D1U4 455 aa18.1■□□□□ 0.49
CDK4-215ENST00000553237 EPOPA6NHQ4 379 aa18.1■□□□□ 0.49
CDK4-215ENST00000553237 EFCAB14O75071 495 aa18.1■□□□□ 0.49
CDK4-215ENST00000553237 CAND2O75155 1236 aa18.1■□□□□ 0.49
CDK4-215ENST00000553237 GNA11P29992 359 aa18.1■□□□□ 0.49
CDK4-215ENST00000553237 PLEKHG4Q58EX7 1191 aa18.1■□□□□ 0.49
CDK4-215ENST00000553237 SPRED2Q7Z698 418 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms