RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 TMEM184AQ6ZMB5 413 aa6.13□□□□□ -1.43
CKAP4-203ENST00000553039 FAM160B2Q86V87 743 aa6.13□□□□□ -1.43
CKAP4-203ENST00000553039 NPAS4Q8IUM7 802 aa6.13□□□□□ -1.43
CKAP4-203ENST00000553039 CLEC10AQ8IUN9 316 aa6.13□□□□□ -1.43
CKAP4-203ENST00000553039 DHX37Q8IY37 1157 aaKnown RBP6.13□□□□□ -1.43
CKAP4-203ENST00000553039 DCLK2Q8N568 766 aa6.13□□□□□ -1.43
CKAP4-203ENST00000553039 STAG1Q8WVM7 1258 aa6.13□□□□□ -1.43
CKAP4-203ENST00000553039 DDX1Q92499 740 aaKnown RBP6.13□□□□□ -1.43
CKAP4-203ENST00000553039 MKL1Q969V6 931 aa6.13□□□□□ -1.43
CKAP4-203ENST00000553039 NUP88Q99567 741 aaPredicted RBP6.13□□□□□ -1.43
CKAP4-203ENST00000553039 RIOK1Q9BRS2 568 aaKnown RBP6.13□□□□□ -1.43
CKAP4-203ENST00000553039 MKNK2Q9HBH9 465 aa6.13□□□□□ -1.43
CKAP4-203ENST00000553039 ZNF287Q9HBT7 754 aa6.13□□□□□ -1.43
CKAP4-203ENST00000553039 CYP39A1Q9NYL5 469 aa6.13□□□□□ -1.43
CKAP4-203ENST00000553039 NCDNQ9UBB6 729 aa6.13□□□□□ -1.43
CKAP4-203ENST00000553039 HDAC6Q9UBN7 1215 aa6.13□□□□□ -1.43
CKAP4-203ENST00000553039 CLIP2Q9UDT6 1046 aa6.13□□□□□ -1.43
CKAP4-203ENST00000553039 RALYQ9UKM9 306 aaKnown RBP6.13□□□□□ -1.43
CKAP4-203ENST00000553039 FBXL21Q9UKT6 434 aa6.13□□□□□ -1.43
CKAP4-203ENST00000553039 PNMA2Q9UL42 364 aa6.13□□□□□ -1.43
CKAP4-203ENST00000553039 BARX2Q9UMQ3 279 aaPredicted RBP6.13□□□□□ -1.43
CKAP4-203ENST00000553039 SALL2Q9Y467 1007 aaPredicted RBP6.13□□□□□ -1.43
CKAP4-203ENST00000553039 R4GN57 208 aa6.13□□□□□ -1.43
CKAP4-203ENST00000553039 TMEM232C9JQI7 657 aa6.12□□□□□ -1.43
CKAP4-203ENST00000553039 PI15O43692 258 aa6.12□□□□□ -1.43
CKAP4-203ENST00000553039 KINO60870 393 aaKnown RBP6.12□□□□□ -1.43
CKAP4-203ENST00000553039 CAND2O75155 1236 aa6.12□□□□□ -1.43
CKAP4-203ENST00000553039 PPFIA4O75335 1185 aa6.12□□□□□ -1.43
CKAP4-203ENST00000553039 GABBR2O75899 941 aa6.12□□□□□ -1.43
CKAP4-203ENST00000553039 GH1P01241 217 aa6.12□□□□□ -1.43
CKAP4-203ENST00000553039 SKIP12755 728 aa6.12□□□□□ -1.43
CKAP4-203ENST00000553039 PLXNA3P51805 1871 aa6.12□□□□□ -1.43
CKAP4-203ENST00000553039 MCCD1P59942 119 aaPredicted RBP6.12□□□□□ -1.43
CKAP4-203ENST00000553039 UBE3AQ05086 875 aa6.12□□□□□ -1.43
CKAP4-203ENST00000553039 ITIH3Q06033 890 aa6.12□□□□□ -1.43
CKAP4-203ENST00000553039 TBC1D8BQ0IIM8 1120 aa6.12□□□□□ -1.43
CKAP4-203ENST00000553039 IKQ13123 557 aaPredicted RBP6.12□□□□□ -1.43
CKAP4-203ENST00000553039 OS9Q13438 667 aaPredicted RBP6.12□□□□□ -1.43
CKAP4-203ENST00000553039 MTX1Q13505 466 aa6.12□□□□□ -1.43
CKAP4-203ENST00000553039 CAMK1Q14012 370 aa6.12□□□□□ -1.43
CKAP4-203ENST00000553039 SLC9C2Q5TAH2 1124 aa6.12□□□□□ -1.43
CKAP4-203ENST00000553039 C16orf86Q6ZW13 317 aa6.12□□□□□ -1.43
CKAP4-203ENST00000553039 ZDHHC14Q8IZN3 488 aa6.12□□□□□ -1.43
CKAP4-203ENST00000553039 ZNF444Q8N0Y2 327 aaPredicted RBP6.12□□□□□ -1.43
CKAP4-203ENST00000553039 FAM200AQ8TCP9 573 aa6.12□□□□□ -1.43
CKAP4-203ENST00000553039 ATP8B4Q8TF62 1192 aa6.12□□□□□ -1.43
CKAP4-203ENST00000553039 PPP1R13LQ8WUF5 828 aa6.12□□□□□ -1.43
CKAP4-203ENST00000553039 ZNF592Q92610 1267 aa6.12□□□□□ -1.43
CKAP4-203ENST00000553039 DHX38Q92620 1227 aaKnown RBP6.12□□□□□ -1.43
CKAP4-203ENST00000553039 ALG1Q9BT22 464 aa6.12□□□□□ -1.43
CKAP4-203ENST00000553039 S1PR5Q9H228 398 aa6.12□□□□□ -1.43
CKAP4-203ENST00000553039 AAASQ9NRG9 546 aa6.12□□□□□ -1.43
CKAP4-203ENST00000553039 PUF60Q9UHX1 559 aaKnown RBP6.12□□□□□ -1.43
CKAP4-203ENST00000553039 ANGPTL2Q9UKU9 493 aa6.12□□□□□ -1.43
CKAP4-203ENST00000553039 ISY1Q9ULR0 285 aaKnown RBP6.12□□□□□ -1.43
CKAP4-203ENST00000553039 ZNF292O60281 2723 aa6.12□□□□□ -1.43
CKAP4-203ENST00000553039 MAP1BP46821 2468 aaKnown RBP6.11□□□□□ -1.43
CKAP4-203ENST00000553039 TET1Q8NFU7 2136 aa6.11□□□□□ -1.43
CKAP4-203ENST00000553039 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.11□□□□□ -1.43
CKAP4-203ENST00000553039 PLA2G6O60733 806 aa6.11□□□□□ -1.43
CKAP4-203ENST00000553039 ITGB1P05556 798 aa6.11□□□□□ -1.43
CKAP4-203ENST00000553039 CYP2D6P10635 497 aa6.11□□□□□ -1.43
CKAP4-203ENST00000553039 GNAT1P11488 350 aa6.11□□□□□ -1.43
CKAP4-203ENST00000553039 TECP42680 631 aa6.11□□□□□ -1.43
CKAP4-203ENST00000553039 MTHFRP42898 656 aa6.11□□□□□ -1.43
CKAP4-203ENST00000553039 PSEN2P49810 448 aa6.11□□□□□ -1.43
CKAP4-203ENST00000553039 ALDH5A1P51649 535 aaPredicted RBP6.11□□□□□ -1.43
CKAP4-203ENST00000553039 STAT2P52630 851 aa6.11□□□□□ -1.43
CKAP4-203ENST00000553039 DDX10Q13206 875 aaKnown RBP6.11□□□□□ -1.43
CKAP4-203ENST00000553039 LAMC2Q13753 1193 aa6.11□□□□□ -1.43
CKAP4-203ENST00000553039 BAATQ14032 418 aaPredicted RBP6.11□□□□□ -1.43
CKAP4-203ENST00000553039 MBTPS1Q14703 1052 aa6.11□□□□□ -1.43
CKAP4-203ENST00000553039 TRIM71Q2Q1W2 868 aaKnown RBP6.11□□□□□ -1.43
CKAP4-203ENST00000553039 PROX2Q3B8N5 592 aa6.11□□□□□ -1.43
CKAP4-203ENST00000553039 TNNI3KQ59H18 835 aa6.11□□□□□ -1.43
CKAP4-203ENST00000553039 ATAT1Q5SQI0 421 aa6.11□□□□□ -1.43
CKAP4-203ENST00000553039 SLFN13Q68D06 897 aa6.11□□□□□ -1.43
CKAP4-203ENST00000553039 ANKRD54Q6NXT1 300 aa6.11□□□□□ -1.43
CKAP4-203ENST00000553039 TRAF7Q6Q0C0 670 aa6.11□□□□□ -1.43
CKAP4-203ENST00000553039 ANKMY2Q8IV38 441 aa6.11□□□□□ -1.43
CKAP4-203ENST00000553039 KLHL23Q8NBE8 558 aa6.11□□□□□ -1.43
CKAP4-203ENST00000553039 DNERQ8NFT8 737 aa6.11□□□□□ -1.43
CKAP4-203ENST00000553039 FAM174AQ8TBP5 190 aa6.11□□□□□ -1.43
CKAP4-203ENST00000553039 AFG1LQ8WV93 481 aa6.11□□□□□ -1.43
CKAP4-203ENST00000553039 POF1BQ8WVV4 589 aa6.11□□□□□ -1.43
CKAP4-203ENST00000553039 ATRIPQ8WXE1 791 aa6.11□□□□□ -1.43
CKAP4-203ENST00000553039 CTAGE1Q96RT6 745 aa6.11□□□□□ -1.43
CKAP4-203ENST00000553039 DBNDD2Q9BQY9 259 aa6.11□□□□□ -1.43
CKAP4-203ENST00000553039 EGFL7Q9UHF1 273 aa6.11□□□□□ -1.43
CKAP4-203ENST00000553039 FKBPLQ9UIM3 349 aa6.11□□□□□ -1.43
CKAP4-203ENST00000553039 PCDHB12Q9Y5F1 795 aa6.11□□□□□ -1.43
CKAP4-203ENST00000553039 FPGT-TNNI3KV9GXZ4 949 aa6.11□□□□□ -1.43
CKAP4-203ENST00000553039 PTPDC1A2A3K4 754 aa6.1□□□□□ -1.43
CKAP4-203ENST00000553039 ANKRD33BA6NCL7 494 aa6.1□□□□□ -1.43
CKAP4-203ENST00000553039 ENPP3O14638 875 aa6.1□□□□□ -1.43
CKAP4-203ENST00000553039 PER2O15055 1255 aa6.1□□□□□ -1.43
CKAP4-203ENST00000553039 PPFIA3O75145 1194 aa6.1□□□□□ -1.43
CKAP4-203ENST00000553039 CSPG5O95196 566 aa6.1□□□□□ -1.43
CKAP4-203ENST00000553039 PROS1P07225 676 aa6.1□□□□□ -1.43
CKAP4-203ENST00000553039 MMP3P08254 477 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms