RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 FOSBP53539 338 aa13.02□□□□□ -0.33
TMEM116-218ENST00000552839 ERVK-21P61565 698 aa13.02□□□□□ -0.33
TMEM116-218ENST00000552839 GNL2Q13823 731 aaKnown RBP13.02□□□□□ -0.33
TMEM116-218ENST00000552839 CNKSR3Q6P9H4 555 aa13.02□□□□□ -0.33
TMEM116-218ENST00000552839 LRRC8DQ7L1W4 858 aa13.02□□□□□ -0.33
TMEM116-218ENST00000552839 GJD3Q8N144 294 aa13.02□□□□□ -0.33
TMEM116-218ENST00000552839 CCDC155Q8N6L0 562 aa13.02□□□□□ -0.33
TMEM116-218ENST00000552839 DNERQ8NFT8 737 aa13.02□□□□□ -0.33
TMEM116-218ENST00000552839 GPKOWQ92917 476 aaPredicted RBP eCLIP13.02□□□□□ -0.33
TMEM116-218ENST00000552839 TGS1Q96RS0 853 aaKnown RBP13.02□□□□□ -0.33
TMEM116-218ENST00000552839 BRMS1Q9HCU9 246 aa13.02□□□□□ -0.33
TMEM116-218ENST00000552839 FOXD4L1Q9NU39 408 aa13.02□□□□□ -0.33
TMEM116-218ENST00000552839 STK36Q9NRP7 1315 aa13.02□□□□□ -0.33
TMEM116-218ENST00000552839 MUC6Q6W4X9 2439 aa13.02□□□□□ -0.33
TMEM116-218ENST00000552839 CYTH3O43739 400 aa13.01□□□□□ -0.33
TMEM116-218ENST00000552839 CXCL10P02778 98 aa13.01□□□□□ -0.33
TMEM116-218ENST00000552839 IL9P15248 144 aa13.01□□□□□ -0.33
TMEM116-218ENST00000552839 KCNA5P22460 613 aa13.01□□□□□ -0.33
TMEM116-218ENST00000552839 RBL2Q08999 1139 aa13.01□□□□□ -0.33
TMEM116-218ENST00000552839 LEXMQ3ZCV2 418 aa13.01□□□□□ -0.33
TMEM116-218ENST00000552839 PPP1R18Q6NYC8 613 aa13.01□□□□□ -0.33
TMEM116-218ENST00000552839 CCDC62Q6P9F0 684 aa13.01□□□□□ -0.33
TMEM116-218ENST00000552839 SESTD1Q86VW0 696 aa13.01□□□□□ -0.33
TMEM116-218ENST00000552839 MCF2L2Q86YR7 1114 aa13.01□□□□□ -0.33
TMEM116-218ENST00000552839 NSUN7Q8NE18 718 aaKnown RBP13.01□□□□□ -0.33
TMEM116-218ENST00000552839 AFG1LQ8WV93 481 aa13.01□□□□□ -0.33
TMEM116-218ENST00000552839 KAT2BQ92831 832 aa13.01□□□□□ -0.33
TMEM116-218ENST00000552839 MPHOSPH6Q99547 160 aaKnown RBP13.01□□□□□ -0.33
TMEM116-218ENST00000552839 RAD9AQ99638 391 aa13.01□□□□□ -0.33
TMEM116-218ENST00000552839 FAM217BQ9NTX9 383 aaPredicted RBP13.01□□□□□ -0.33
TMEM116-218ENST00000552839 MICAL3Q7RTP6 2002 aa13.01□□□□□ -0.33
TMEM116-218ENST00000552839 ABHD14A-ACY1A0A1B0GW23 586 aa13□□□□□ -0.33
TMEM116-218ENST00000552839 JAK2O60674 1132 aa13□□□□□ -0.33
TMEM116-218ENST00000552839 PARNO95453 639 aaKnown RBP13□□□□□ -0.33
TMEM116-218ENST00000552839 MMP3P08254 477 aa13□□□□□ -0.33
TMEM116-218ENST00000552839 CKBP12277 381 aa13□□□□□ -0.33
TMEM116-218ENST00000552839 ADCY7P51828 1080 aa13□□□□□ -0.33
TMEM116-218ENST00000552839 PFKFB3Q16875 520 aaPredicted RBP13□□□□□ -0.33
TMEM116-218ENST00000552839 LY6KQ17RY6 165 aa13□□□□□ -0.33
TMEM116-218ENST00000552839 FAM117BQ6P1L5 589 aa13□□□□□ -0.33
TMEM116-218ENST00000552839 ALG1Q9BT22 464 aa13□□□□□ -0.33
TMEM116-218ENST00000552839 GLT8D2Q9H1C3 349 aa13□□□□□ -0.33
TMEM116-218ENST00000552839 H3BQV1 296 aa12.99□□□□□ -0.33
TMEM116-218ENST00000552839 GJB2P29033 226 aa12.99□□□□□ -0.33
TMEM116-218ENST00000552839 SSTR3P32745 418 aaPredicted RBP12.99□□□□□ -0.33
TMEM116-218ENST00000552839 NLRP5P59047 1200 aa12.99□□□□□ -0.33
TMEM116-218ENST00000552839 ARHGAP1Q07960 439 aa12.99□□□□□ -0.33
TMEM116-218ENST00000552839 SAFBQ15424 915 aaKnown RBP eCLIP12.99□□□□□ -0.33
TMEM116-218ENST00000552839 NTRK3Q16288 839 aa12.99□□□□□ -0.33
TMEM116-218ENST00000552839 WWC2Q6AWC2 1192 aa12.99□□□□□ -0.33
TMEM116-218ENST00000552839 SPRYD3Q8NCJ5 442 aa12.99□□□□□ -0.33
TMEM116-218ENST00000552839 SMARCC2Q8TAQ2 1214 aa12.99□□□□□ -0.33
TMEM116-218ENST00000552839 BICD2Q8TD16 824 aa12.99□□□□□ -0.33
TMEM116-218ENST00000552839 C8orf76Q96K31 380 aa12.99□□□□□ -0.33
TMEM116-218ENST00000552839 C17orf80Q9BSJ5 609 aa12.99□□□□□ -0.33
TMEM116-218ENST00000552839 EHMT1Q9H9B1 1298 aa12.99□□□□□ -0.33
TMEM116-218ENST00000552839 C6orf50Q9HD87 102 aa12.99□□□□□ -0.33
TMEM116-218ENST00000552839 HDAC6Q9UBN7 1215 aa12.99□□□□□ -0.33
TMEM116-218ENST00000552839 GTF2IRD1Q9UHL9 959 aa12.99□□□□□ -0.33
TMEM116-218ENST00000552839 NLRC5Q86WI3 1866 aa12.99□□□□□ -0.33
TMEM116-218ENST00000552839 GRXCR2A6NFK2 248 aa12.98□□□□□ -0.33
TMEM116-218ENST00000552839 B4DLN1 442 aa12.98□□□□□ -0.33
TMEM116-218ENST00000552839 GCOM1H8Y6P7 765 aaPredicted RBP12.98□□□□□ -0.33
TMEM116-218ENST00000552839 CFBP00751 764 aa12.98□□□□□ -0.33
TMEM116-218ENST00000552839 GH1P01241 217 aa12.98□□□□□ -0.33
TMEM116-218ENST00000552839 POLR2MP0CAP2 368 aa12.98□□□□□ -0.33
TMEM116-218ENST00000552839 GNA11P29992 359 aa12.98□□□□□ -0.33
TMEM116-218ENST00000552839 MRPL12P52815 198 aaKnown RBP12.98□□□□□ -0.33
TMEM116-218ENST00000552839 FUT2Q10981 343 aa12.98□□□□□ -0.33
TMEM116-218ENST00000552839 IKBKEQ14164 716 aa12.98□□□□□ -0.33
TMEM116-218ENST00000552839 PTCRAQ6ISU1 281 aaPredicted RBP12.98□□□□□ -0.33
TMEM116-218ENST00000552839 TRAF7Q6Q0C0 670 aa12.98□□□□□ -0.33
TMEM116-218ENST00000552839 SEPT14Q6ZU15 432 aa12.98□□□□□ -0.33
TMEM116-218ENST00000552839 TBC1D5Q92609 795 aa12.98□□□□□ -0.33
TMEM116-218ENST00000552839 WNT8BQ93098 351 aa12.98□□□□□ -0.33
TMEM116-218ENST00000552839 MTMR8Q96EF0 704 aa12.98□□□□□ -0.33
TMEM116-218ENST00000552839 UIMC1Q96RL1 719 aa12.98□□□□□ -0.33
TMEM116-218ENST00000552839 BARHL2Q9NY43 387 aa12.98□□□□□ -0.33
TMEM116-218ENST00000552839 VPS54Q9P1Q0 977 aa12.98□□□□□ -0.33
TMEM116-218ENST00000552839 SMCO2A6NFE2 343 aa12.97□□□□□ -0.33
TMEM116-218ENST00000552839 SPDYE3A6NKU9 549 aa12.97□□□□□ -0.33
TMEM116-218ENST00000552839 STXBP3O00186 592 aa12.97□□□□□ -0.33
TMEM116-218ENST00000552839 EFCAB14O75071 495 aa12.97□□□□□ -0.33
TMEM116-218ENST00000552839 CTDNEP1O95476 244 aa12.97□□□□□ -0.33
TMEM116-218ENST00000552839 ALADP13716 330 aa12.97□□□□□ -0.33
TMEM116-218ENST00000552839 PDCP20941 246 aa12.97□□□□□ -0.33
TMEM116-218ENST00000552839 MRE11P49959 708 aa12.97□□□□□ -0.33
TMEM116-218ENST00000552839 ZNF200P98182 395 aaPredicted RBP12.97□□□□□ -0.33
TMEM116-218ENST00000552839 MBTPS1Q14703 1052 aa12.97□□□□□ -0.33
TMEM116-218ENST00000552839 SLC35G1Q2M3R5 365 aa12.97□□□□□ -0.33
TMEM116-218ENST00000552839 TRIM71Q2Q1W2 868 aaKnown RBP12.97□□□□□ -0.33
TMEM116-218ENST00000552839 ZNF618Q5T7W0 954 aa12.97□□□□□ -0.33
TMEM116-218ENST00000552839 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.97□□□□□ -0.33
TMEM116-218ENST00000552839 RGS22Q8NE09 1264 aa12.97□□□□□ -0.33
TMEM116-218ENST00000552839 FBXO22Q8NEZ5 403 aa12.97□□□□□ -0.33
TMEM116-218ENST00000552839 INTS4Q96HW7 963 aaKnown RBP12.97□□□□□ -0.33
TMEM116-218ENST00000552839 TAAR1Q96RJ0 339 aa12.97□□□□□ -0.33
TMEM116-218ENST00000552839 PSTPIP2Q9H939 334 aa12.97□□□□□ -0.33
TMEM116-218ENST00000552839 SH3GLB2Q9NR46 395 aa12.97□□□□□ -0.33
TMEM116-218ENST00000552839 ATG2AQ2TAZ0 1938 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms