RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 CXCL10P02778 98 aa10.02□□□□□ -0.8
TMEM116-217ENST00000552801 UBA1P22314 1058 aaKnown RBP10.02□□□□□ -0.8
TMEM116-217ENST00000552801 SP4Q02446 784 aa10.02□□□□□ -0.8
TMEM116-217ENST00000552801 RBL2Q08999 1139 aa10.02□□□□□ -0.8
TMEM116-217ENST00000552801 GRM4Q14833 912 aa10.02□□□□□ -0.8
TMEM116-217ENST00000552801 HSDL1Q3SXM5 330 aa10.02□□□□□ -0.8
TMEM116-217ENST00000552801 RSPH3Q86UC2 560 aa10.02□□□□□ -0.8
TMEM116-217ENST00000552801 NLRX1Q86UT6 975 aa10.02□□□□□ -0.8
TMEM116-217ENST00000552801 VSIG10LQ86VR7 867 aa10.02□□□□□ -0.8
TMEM116-217ENST00000552801 GIMAP8Q8ND71 665 aaPredicted RBP10.02□□□□□ -0.8
TMEM116-217ENST00000552801 EXOC6Q8TAG9 804 aa10.02□□□□□ -0.8
TMEM116-217ENST00000552801 DHX38Q92620 1227 aaKnown RBP10.02□□□□□ -0.8
TMEM116-217ENST00000552801 VWCEQ96DN2 955 aa10.02□□□□□ -0.8
TMEM116-217ENST00000552801 SAMD11Q96NU1 681 aa10.02□□□□□ -0.8
TMEM116-217ENST00000552801 FAM50BQ9Y247 325 aa10.02□□□□□ -0.8
TMEM116-217ENST00000552801 COL4A4P53420 1690 aaPredicted RBP10.02□□□□□ -0.8
TMEM116-217ENST00000552801 SIP14410 1827 aa10.02□□□□□ -0.81
TMEM116-217ENST00000552801 LINC01553A4QN01 128 aa10.01□□□□□ -0.81
TMEM116-217ENST00000552801 HAS3O00219 553 aa10.01□□□□□ -0.81
TMEM116-217ENST00000552801 FIBPO43427 364 aa10.01□□□□□ -0.81
TMEM116-217ENST00000552801 CAND2O75155 1236 aa10.01□□□□□ -0.81
TMEM116-217ENST00000552801 LGALS2P05162 132 aa10.01□□□□□ -0.81
TMEM116-217ENST00000552801 CTSHP09668 335 aa10.01□□□□□ -0.81
TMEM116-217ENST00000552801 SMIM10L2AP0DMW4 78 aa10.01□□□□□ -0.81
TMEM116-217ENST00000552801 SMIM10L2BP0DMW5 78 aa10.01□□□□□ -0.81
TMEM116-217ENST00000552801 SSTR3P32745 418 aaPredicted RBP10.01□□□□□ -0.81
TMEM116-217ENST00000552801 GNAQP50148 359 aa10.01□□□□□ -0.81
TMEM116-217ENST00000552801 ERVK-21P61565 698 aa10.01□□□□□ -0.81
TMEM116-217ENST00000552801 ZNF200P98182 395 aaPredicted RBP10.01□□□□□ -0.81
TMEM116-217ENST00000552801 SEC23AQ15436 765 aa10.01□□□□□ -0.81
TMEM116-217ENST00000552801 TMEM31Q5JXX7 168 aa10.01□□□□□ -0.81
TMEM116-217ENST00000552801 UTP14CQ5TAP6 766 aaKnown RBP10.01□□□□□ -0.81
TMEM116-217ENST00000552801 TYW1BQ6NUM6 668 aa10.01□□□□□ -0.81
TMEM116-217ENST00000552801 CYB5R4Q7L1T6 521 aa10.01□□□□□ -0.81
TMEM116-217ENST00000552801 CYFIP1Q7L576 1253 aa10.01□□□□□ -0.81
TMEM116-217ENST00000552801 DBF4BQ8NFT6 615 aa10.01□□□□□ -0.81
TMEM116-217ENST00000552801 EPAS1Q99814 870 aa10.01□□□□□ -0.81
TMEM116-217ENST00000552801 RTEL1Q9NZ71 1219 aa10.01□□□□□ -0.81
TMEM116-217ENST00000552801 CCDC69A6NI79 296 aa10.01□□□□□ -0.81
TMEM116-217ENST00000552801 ARHGAP33O14559 1287 aa10.01□□□□□ -0.81
TMEM116-217ENST00000552801 KCNA5P22460 613 aa10.01□□□□□ -0.81
TMEM116-217ENST00000552801 ARHGAP4P98171 946 aa10.01□□□□□ -0.81
TMEM116-217ENST00000552801 TIGD5Q53EQ6 642 aa10.01□□□□□ -0.81
TMEM116-217ENST00000552801 TTC22Q5TAA0 569 aa10.01□□□□□ -0.81
TMEM116-217ENST00000552801 METTL7BQ6UX53 244 aa10.01□□□□□ -0.81
TMEM116-217ENST00000552801 SERINC5Q86VE9 423 aa10.01□□□□□ -0.81
TMEM116-217ENST00000552801 IL31RAQ8NI17 732 aa10.01□□□□□ -0.81
TMEM116-217ENST00000552801 APBB2Q92870 758 aa10.01□□□□□ -0.81
TMEM116-217ENST00000552801 TNPO1Q92973 898 aaKnown RBP10.01□□□□□ -0.81
TMEM116-217ENST00000552801 CDHR1Q96JP9 859 aa10.01□□□□□ -0.81
TMEM116-217ENST00000552801 LZTS2Q9BRK4 669 aa10.01□□□□□ -0.81
TMEM116-217ENST00000552801 IFIH1Q9BYX4 1025 aaKnown RBP10.01□□□□□ -0.81
TMEM116-217ENST00000552801 RIOX1Q9H6W3 641 aa10.01□□□□□ -0.81
TMEM116-217ENST00000552801 UBE2ZQ9H832 354 aaPredicted RBP10.01□□□□□ -0.81
TMEM116-217ENST00000552801 EHMT1Q9H9B1 1298 aa10.01□□□□□ -0.81
TMEM116-217ENST00000552801 SUGCTQ9HAC7 445 aa10.01□□□□□ -0.81
TMEM116-217ENST00000552801 PTPRSQ13332 1948 aa10□□□□□ -0.81
TMEM116-217ENST00000552801 BAZ2BQ9UIF8 2168 aaKnown RBP10□□□□□ -0.81
TMEM116-217ENST00000552801 SPDYE3A6NKU9 549 aa10□□□□□ -0.81
TMEM116-217ENST00000552801 E7EWF7 191 aa10□□□□□ -0.81
TMEM116-217ENST00000552801 TREHO43280 583 aa10□□□□□ -0.81
TMEM116-217ENST00000552801 PPP1R11O60927 126 aaPredicted RBP10□□□□□ -0.81
TMEM116-217ENST00000552801 ARHGEF15O94989 841 aa10□□□□□ -0.81
TMEM116-217ENST00000552801 HOXD8P13378 290 aaPredicted RBP10□□□□□ -0.81
TMEM116-217ENST00000552801 SP2Q02086 613 aa10□□□□□ -0.81
TMEM116-217ENST00000552801 GHRHRQ02643 423 aa10□□□□□ -0.81
TMEM116-217ENST00000552801 GPM6BQ13491 265 aa10□□□□□ -0.81
TMEM116-217ENST00000552801 CSPP1Q1MSJ5 1256 aa10□□□□□ -0.81
TMEM116-217ENST00000552801 PUS10Q3MIT2 529 aaKnown RBP10□□□□□ -0.81
TMEM116-217ENST00000552801 XRRA1Q6P2D8 792 aa10□□□□□ -0.81
TMEM116-217ENST00000552801 SYNE3Q6ZMZ3 975 aa10□□□□□ -0.81
TMEM116-217ENST00000552801 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10□□□□□ -0.81
TMEM116-217ENST00000552801 TMTC2Q8N394 836 aa10□□□□□ -0.81
TMEM116-217ENST00000552801 GLG1Q92896 1179 aa10□□□□□ -0.81
TMEM116-217ENST00000552801 MTMR8Q96EF0 704 aa10□□□□□ -0.81
TMEM116-217ENST00000552801 CTAGE1Q96RT6 745 aa10□□□□□ -0.81
TMEM116-217ENST00000552801 C16orf70Q9BSU1 422 aa10□□□□□ -0.81
TMEM116-217ENST00000552801 SETD4Q9NVD3 440 aa10□□□□□ -0.81
TMEM116-217ENST00000552801 MICAL3Q7RTP6 2002 aa10□□□□□ -0.81
TMEM116-217ENST00000552801 TTC28Q96AY4 2481 aa9.99□□□□□ -0.81
TMEM116-217ENST00000552801 VCANP13611 3396 aa9.99□□□□□ -0.81
TMEM116-217ENST00000552801 M0QZ92 97 aa9.99□□□□□ -0.81
TMEM116-217ENST00000552801 OPLAHO14841 1288 aa9.99□□□□□ -0.81
TMEM116-217ENST00000552801 RGS20O76081 388 aa9.99□□□□□ -0.81
TMEM116-217ENST00000552801 DDAH1O94760 285 aa9.99□□□□□ -0.81
TMEM116-217ENST00000552801 CYP21A2P08686 494 aa9.99□□□□□ -0.81
TMEM116-217ENST00000552801 CALM1P0DP23 149 aa9.99□□□□□ -0.81
TMEM116-217ENST00000552801 CALM2P0DP24 149 aa9.99□□□□□ -0.81
TMEM116-217ENST00000552801 CALM3P0DP25 149 aa9.99□□□□□ -0.81
TMEM116-217ENST00000552801 TRIM71Q2Q1W2 868 aaKnown RBP9.99□□□□□ -0.81
TMEM116-217ENST00000552801 PLEKHG4Q58EX7 1191 aa9.99□□□□□ -0.81
TMEM116-217ENST00000552801 FIBCD1Q8N539 461 aa9.99□□□□□ -0.81
TMEM116-217ENST00000552801 MRPL38Q96DV4 380 aaKnown RBP9.99□□□□□ -0.81
TMEM116-217ENST00000552801 C17orf80Q9BSJ5 609 aa9.99□□□□□ -0.81
TMEM116-217ENST00000552801 ADAM33Q9BZ11 813 aa9.99□□□□□ -0.81
TMEM116-217ENST00000552801 RNPEPQ9H4A4 650 aa9.99□□□□□ -0.81
TMEM116-217ENST00000552801 RAPGEFL1Q9UHV5 662 aa9.99□□□□□ -0.81
TMEM116-217ENST00000552801 RWDD3Q9Y3V2 267 aa9.99□□□□□ -0.81
TMEM116-217ENST00000552801 NRCAMQ92823 1304 aa9.98□□□□□ -0.81
TMEM116-217ENST00000552801 DOCK5Q9H7D0 1870 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms