RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 GPCPD1Q9NPB8 672 aa12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 STIM2Q9P246 746 aa12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 BIN2Q9UBW5 565 aaPredicted RBP12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 SNX12Q9UMY4 172 aa12.14□□□□□ -0.47
TUBA1C-209ENST00000552448 LTBP3Q9NS15 1303 aa12.13□□□□□ -0.47
TUBA1C-209ENST00000552448 SIPA1L1O43166 1804 aa12.13□□□□□ -0.47
TUBA1C-209ENST00000552448 PES1O00541 588 aaKnown RBP12.13□□□□□ -0.47
TUBA1C-209ENST00000552448 USO1O60763 962 aaKnown RBP12.13□□□□□ -0.47
TUBA1C-209ENST00000552448 ENTPD3O75355 529 aa12.13□□□□□ -0.47
TUBA1C-209ENST00000552448 TACC1O75410 805 aa12.13□□□□□ -0.47
TUBA1C-209ENST00000552448 TFRCP02786 760 aaKnown RBP12.13□□□□□ -0.47
TUBA1C-209ENST00000552448 RPN1P04843 607 aaKnown RBP12.13□□□□□ -0.47
TUBA1C-209ENST00000552448 MYBL2P10244 700 aa12.13□□□□□ -0.47
TUBA1C-209ENST00000552448 IDEP14735 1019 aa12.13□□□□□ -0.47
TUBA1C-209ENST00000552448 MDH1P40925 334 aaKnown RBP12.13□□□□□ -0.47
TUBA1C-209ENST00000552448 PAFAH1B1P43034 410 aa12.13□□□□□ -0.47
TUBA1C-209ENST00000552448 CACNB3P54284 484 aa12.13□□□□□ -0.47
TUBA1C-209ENST00000552448 KIF5AQ12840 1032 aa12.13□□□□□ -0.47
TUBA1C-209ENST00000552448 PDCLQ13371 301 aa12.13□□□□□ -0.47
TUBA1C-209ENST00000552448 TTMPQ5BVD1 217 aa12.13□□□□□ -0.47
TUBA1C-209ENST00000552448 CFAP58Q5T655 872 aa12.13□□□□□ -0.47
TUBA1C-209ENST00000552448 ZNF658Q5TYW1 1059 aaPredicted RBP12.13□□□□□ -0.47
TUBA1C-209ENST00000552448 EP400NLQ6ZTU2 488 aa12.13□□□□□ -0.47
TUBA1C-209ENST00000552448 ADGRF4Q8IZF3 695 aa12.13□□□□□ -0.47
TUBA1C-209ENST00000552448 OGFOD1Q8N543 542 aa12.13□□□□□ -0.47
TUBA1C-209ENST00000552448 EIF1ADQ8N9N8 165 aaKnown RBP12.13□□□□□ -0.47
TUBA1C-209ENST00000552448 CCHCR1Q8TD31 782 aa12.13□□□□□ -0.47
TUBA1C-209ENST00000552448 COA7Q96BR5 231 aa12.13□□□□□ -0.47
TUBA1C-209ENST00000552448 CCDC17Q96LX7 622 aa12.13□□□□□ -0.47
TUBA1C-209ENST00000552448 CCT8L2Q96SF2 557 aa12.13□□□□□ -0.47
TUBA1C-209ENST00000552448 JADE2Q9NQC1 790 aa12.13□□□□□ -0.47
TUBA1C-209ENST00000552448 ZNF277Q9NRM2 450 aaPredicted RBP12.13□□□□□ -0.47
TUBA1C-209ENST00000552448 KBTBD4Q9NVX7 518 aa12.13□□□□□ -0.47
TUBA1C-209ENST00000552448 TMEM260Q9NX78 707 aa12.13□□□□□ -0.47
TUBA1C-209ENST00000552448 FAM198AQ9UFP1 575 aa12.13□□□□□ -0.47
TUBA1C-209ENST00000552448 TSKSQ9UJT2 592 aa12.13□□□□□ -0.47
TUBA1C-209ENST00000552448 PNMA6FA0A0J9YX94 578 aa12.12□□□□□ -0.47
TUBA1C-209ENST00000552448 KCNJ18B7U540 433 aa12.12□□□□□ -0.47
TUBA1C-209ENST00000552448 MPHOSPH10O00566 681 aaKnown RBP12.12□□□□□ -0.47
TUBA1C-209ENST00000552448 ENC1O14682 589 aa12.12□□□□□ -0.47
TUBA1C-209ENST00000552448 EDIL3O43854 480 aa12.12□□□□□ -0.47
TUBA1C-209ENST00000552448 PPP1R11O60927 126 aaPredicted RBP12.12□□□□□ -0.47
TUBA1C-209ENST00000552448 RTN2O75298 545 aa12.12□□□□□ -0.47
TUBA1C-209ENST00000552448 NEBLO76041 1014 aa12.12□□□□□ -0.47
TUBA1C-209ENST00000552448 ABL1P00519 1130 aa12.12□□□□□ -0.47
TUBA1C-209ENST00000552448 GHRP10912 638 aa12.12□□□□□ -0.47
TUBA1C-209ENST00000552448 NR1D1P20393 614 aa12.12□□□□□ -0.47
TUBA1C-209ENST00000552448 EEF1GP26641 437 aaKnown RBP12.12□□□□□ -0.47
TUBA1C-209ENST00000552448 ADCY7P51828 1080 aa12.12□□□□□ -0.47
TUBA1C-209ENST00000552448 CLNS1AP54105 237 aaKnown RBP12.12□□□□□ -0.47
TUBA1C-209ENST00000552448 SARNPP82979 210 aaKnown RBP12.12□□□□□ -0.47
TUBA1C-209ENST00000552448 PAK2Q13177 524 aa12.12□□□□□ -0.47
TUBA1C-209ENST00000552448 KCNJ12Q14500 433 aa12.12□□□□□ -0.47
TUBA1C-209ENST00000552448 LACTB2Q53H82 288 aaPredicted RBP12.12□□□□□ -0.47
TUBA1C-209ENST00000552448 TTBK2Q6IQ55 1244 aa12.12□□□□□ -0.47
TUBA1C-209ENST00000552448 PPP1R18Q6NYC8 613 aa12.12□□□□□ -0.47
TUBA1C-209ENST00000552448 CYB5D1Q6P9G0 228 aa12.12□□□□□ -0.47
TUBA1C-209ENST00000552448 SH3BP5LQ7L8J4 393 aa12.12□□□□□ -0.47
TUBA1C-209ENST00000552448 MYCBPAPQ8TBZ2 947 aa12.12□□□□□ -0.47
TUBA1C-209ENST00000552448 LRRC15Q8TF66 581 aa12.12□□□□□ -0.47
TUBA1C-209ENST00000552448 NOC3LQ8WTT2 800 aaKnown RBP12.12□□□□□ -0.47
TUBA1C-209ENST00000552448 CAPZA3Q96KX2 299 aa12.12□□□□□ -0.47
TUBA1C-209ENST00000552448 GMLQ99445 158 aa12.12□□□□□ -0.47
TUBA1C-209ENST00000552448 TMOD2Q9NZR1 351 aa12.12□□□□□ -0.47
TUBA1C-209ENST00000552448 PI4KBQ9UBF8 816 aa12.12□□□□□ -0.47
TUBA1C-209ENST00000552448 HDAC6Q9UBN7 1215 aa12.12□□□□□ -0.47
TUBA1C-209ENST00000552448 CTNND2Q9UQB3 1225 aa12.12□□□□□ -0.47
TUBA1C-209ENST00000552448 DDTLA6NHG4 134 aaPredicted RBP12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 MYL1P05976 194 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 HERVK_113P62684 666 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 MAP2K1Q02750 393 aaPredicted RBP12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 UBXN1Q04323 297 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 TCP10Q12799 353 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 PAK1Q13153 545 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 GPATCH4Q5T3I0 446 aaKnown RBP12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 TLDC1Q6P9B6 456 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 CRELD2Q6UXH1 353 aaPredicted RBP12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 LRIG3Q6UXM1 1119 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 IQCKQ8N0W5 287 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 MTMR14Q8NCE2 650 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 ARMC2Q8NEN0 867 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 SPATA4Q8NEY3 305 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 JDP2Q8WYK2 163 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 MTMR8Q96EF0 704 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 ALS2CR12Q96Q35 445 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 MYH4Q9Y623 1939 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 COL4A5P29400 1685 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 ATRNL1Q5VV63 1379 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 GOLGA6L10A6NI86 522 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 LGALS16A8MUM7 142 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 KLRC4O43908 158 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 CCT6AP40227 531 aaKnown RBP12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 ATP2B2Q01814 1243 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 KCNB1Q14721 858 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 TNIP1Q15025 636 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 CABP7Q86V35 215 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 CREG2Q8IUH2 290 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 FUKQ8N0W3 1084 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 MB21D1Q8N884 522 aa12.11□□□□□ -0.47
TUBA1C-209ENST00000552448 RASSF8Q8NHQ8 419 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms