RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 KATNAL1Q9BW62 490 aa12.08□□□□□ -0.48
SLC48A1-209ENST00000552003 MFSD1Q9H3U5 465 aa12.08□□□□□ -0.48
SLC48A1-209ENST00000552003 RNPEPQ9H4A4 650 aa12.08□□□□□ -0.48
SLC48A1-209ENST00000552003 CNOT1A5YKK6 2376 aaKnown RBP12.08□□□□□ -0.48
SLC48A1-209ENST00000552003 DCDC2BA2VCK2 349 aa12.07□□□□□ -0.48
SLC48A1-209ENST00000552003 TECP42680 631 aa12.07□□□□□ -0.48
SLC48A1-209ENST00000552003 HNRNPUQ00839 825 aaKnown RBP eCLIP12.07□□□□□ -0.48
SLC48A1-209ENST00000552003 NAALADL2Q58DX5 795 aa12.07□□□□□ -0.48
SLC48A1-209ENST00000552003 FAM26DQ5JW98 314 aa12.07□□□□□ -0.48
SLC48A1-209ENST00000552003 SUMF1Q8NBK3 374 aa12.07□□□□□ -0.48
SLC48A1-209ENST00000552003 RIN2Q8WYP3 895 aaPredicted RBP12.07□□□□□ -0.48
SLC48A1-209ENST00000552003 RUBCNQ92622 972 aa12.07□□□□□ -0.48
SLC48A1-209ENST00000552003 APBB2Q92870 758 aa12.07□□□□□ -0.48
SLC48A1-209ENST00000552003 HAUS7Q99871 368 aa12.07□□□□□ -0.48
SLC48A1-209ENST00000552003 SEMA4AQ9H3S1 761 aa12.07□□□□□ -0.48
SLC48A1-209ENST00000552003 BCAS3Q9H6U6 928 aa12.07□□□□□ -0.48
SLC48A1-209ENST00000552003 EHMT1Q9H9B1 1298 aa12.07□□□□□ -0.48
SLC48A1-209ENST00000552003 LIMD1Q9UGP4 676 aa12.07□□□□□ -0.48
SLC48A1-209ENST00000552003 MTMR7Q9Y216 660 aa12.07□□□□□ -0.48
SLC48A1-209ENST00000552003 C17orf102A2RUQ5 167 aa12.06□□□□□ -0.48
SLC48A1-209ENST00000552003 FSCN2O14926 492 aa12.06□□□□□ -0.48
SLC48A1-209ENST00000552003 ADRB1P08588 477 aa12.06□□□□□ -0.48
SLC48A1-209ENST00000552003 TSPY3P0CV98 308 aa12.06□□□□□ -0.48
SLC48A1-209ENST00000552003 TSPY8P0CW00 308 aa12.06□□□□□ -0.48
SLC48A1-209ENST00000552003 SMIM10L2AP0DMW4 78 aa12.06□□□□□ -0.48
SLC48A1-209ENST00000552003 SMIM10L2BP0DMW5 78 aa12.06□□□□□ -0.48
SLC48A1-209ENST00000552003 GHRP10912 638 aa12.06□□□□□ -0.48
SLC48A1-209ENST00000552003 PAN2Q504Q3 1202 aaKnown RBP12.06□□□□□ -0.48
SLC48A1-209ENST00000552003 SYDE2Q5VT97 1194 aa12.06□□□□□ -0.48
SLC48A1-209ENST00000552003 RHPN1Q8TCX5 695 aa12.06□□□□□ -0.48
SLC48A1-209ENST00000552003 HINFPQ9BQA5 517 aa12.06□□□□□ -0.48
SLC48A1-209ENST00000552003 FLNBO75369 2602 aaKnown RBP12.06□□□□□ -0.48
SLC48A1-209ENST00000552003 WEE2P0C1S8 567 aa12.05□□□□□ -0.48
SLC48A1-209ENST00000552003 CT47B1P0C2W7 299 aaPredicted RBP12.05□□□□□ -0.48
SLC48A1-209ENST00000552003 NOVP48745 357 aa12.05□□□□□ -0.48
SLC48A1-209ENST00000552003 ADAM17P78536 824 aa12.05□□□□□ -0.48
SLC48A1-209ENST00000552003 SP2Q02086 613 aa12.05□□□□□ -0.48
SLC48A1-209ENST00000552003 LAMC2Q13753 1193 aa12.05□□□□□ -0.48
SLC48A1-209ENST00000552003 LPIN1Q14693 890 aa12.05□□□□□ -0.48
SLC48A1-209ENST00000552003 ACAP1Q15027 740 aa12.05□□□□□ -0.48
SLC48A1-209ENST00000552003 MYSM1Q5VVJ2 828 aa12.05□□□□□ -0.48
SLC48A1-209ENST00000552003 LLGL2Q6P1M3 1020 aa12.05□□□□□ -0.48
SLC48A1-209ENST00000552003 GIMAP6Q6P9H5 292 aa12.05□□□□□ -0.48
SLC48A1-209ENST00000552003 CMTR2Q8IYT2 770 aaKnown RBP12.05□□□□□ -0.48
SLC48A1-209ENST00000552003 OSBP2Q969R2 916 aa12.05□□□□□ -0.48
SLC48A1-209ENST00000552003 ERVK-5Q9HDB9 667 aa12.05□□□□□ -0.48
SLC48A1-209ENST00000552003 SETD4Q9NVD3 440 aa12.05□□□□□ -0.48
SLC48A1-209ENST00000552003 HCSTQ9UBK5 93 aa12.05□□□□□ -0.48
SLC48A1-209ENST00000552003 FRMPD2Q68DX3 1309 aaPredicted RBP12.05□□□□□ -0.48
SLC48A1-209ENST00000552003 CAND2O75155 1236 aa12.04□□□□□ -0.48
SLC48A1-209ENST00000552003 PPFIA4O75335 1185 aa12.04□□□□□ -0.48
SLC48A1-209ENST00000552003 MGAT3Q09327 533 aa12.04□□□□□ -0.48
SLC48A1-209ENST00000552003 APOBRQ0VD83 1088 aa12.04□□□□□ -0.48
SLC48A1-209ENST00000552003 KANK3Q6NY19 840 aa12.04□□□□□ -0.48
SLC48A1-209ENST00000552003 CEP85Q6P2H3 762 aa12.04□□□□□ -0.48
SLC48A1-209ENST00000552003 SYTL5Q8TDW5 730 aaPredicted RBP12.04□□□□□ -0.48
SLC48A1-209ENST00000552003 MICAL1Q8TDZ2 1067 aa12.04□□□□□ -0.48
SLC48A1-209ENST00000552003 YTHDC1Q96MU7 727 aaKnown RBP12.04□□□□□ -0.48
SLC48A1-209ENST00000552003 STX8Q9UNK0 236 aa12.04□□□□□ -0.48
SLC48A1-209ENST00000552003 SSUH2Q9Y2M2 353 aa12.04□□□□□ -0.48
SLC48A1-209ENST00000552003 NR2E1Q9Y466 385 aa12.04□□□□□ -0.48
SLC48A1-209ENST00000552003 TELO2Q9Y4R8 837 aa12.04□□□□□ -0.48
SLC48A1-209ENST00000552003 FNDC1Q4ZHG4 1894 aaPredicted RBP12.04□□□□□ -0.48
SLC48A1-209ENST00000552003 HIDE1A8MVS5 230 aa12.03□□□□□ -0.48
SLC48A1-209ENST00000552003 SP9P0CG40 484 aa12.03□□□□□ -0.48
SLC48A1-209ENST00000552003 COL9A3Q14050 684 aaPredicted RBP12.03□□□□□ -0.48
SLC48A1-209ENST00000552003 CCDC96Q2M329 555 aa12.03□□□□□ -0.48
SLC48A1-209ENST00000552003 KIAA0319Q5VV43 1072 aa12.03□□□□□ -0.48
SLC48A1-209ENST00000552003 RUFY4Q6ZNE9 571 aa12.03□□□□□ -0.48
SLC48A1-209ENST00000552003 GPKOWQ92917 476 aaPredicted RBP eCLIP12.03□□□□□ -0.48
SLC48A1-209ENST00000552003 CDCA3Q99618 268 aaPredicted RBP12.03□□□□□ -0.48
SLC48A1-209ENST00000552003 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.03□□□□□ -0.48
SLC48A1-209ENST00000552003 AGO3Q9H9G7 860 aaKnown RBP12.03□□□□□ -0.48
SLC48A1-209ENST00000552003 GPCPD1Q9NPB8 672 aa12.03□□□□□ -0.48
SLC48A1-209ENST00000552003 LOXHD1Q8IVV2 1947 aa12.03□□□□□ -0.48
SLC48A1-209ENST00000552003 DOCK5Q9H7D0 1870 aa12.02□□□□□ -0.48
SLC48A1-209ENST00000552003 ATP5JP18859 108 aa12.02□□□□□ -0.49
SLC48A1-209ENST00000552003 TGM1P22735 817 aa12.02□□□□□ -0.49
SLC48A1-209ENST00000552003 STXBP2Q15833 593 aa12.02□□□□□ -0.49
SLC48A1-209ENST00000552003 CELF3Q5SZQ8 465 aaKnown RBP12.02□□□□□ -0.49
SLC48A1-209ENST00000552003 MAML2Q8IZL2 1156 aaPredicted RBP12.02□□□□□ -0.49
SLC48A1-209ENST00000552003 ZDHHC14Q8IZN3 488 aa12.02□□□□□ -0.49
SLC48A1-209ENST00000552003 SIX5Q8N196 739 aa12.02□□□□□ -0.49
SLC48A1-209ENST00000552003 RASGRP4Q8TDF6 673 aa12.02□□□□□ -0.49
SLC48A1-209ENST00000552003 FRAT1Q92837 279 aaPredicted RBP12.02□□□□□ -0.49
SLC48A1-209ENST00000552003 MPHOSPH6Q99547 160 aaKnown RBP12.02□□□□□ -0.49
SLC48A1-209ENST00000552003 RTP3Q9BQQ7 232 aa12.02□□□□□ -0.49
SLC48A1-209ENST00000552003 BCL11AQ9H165 835 aa12.02□□□□□ -0.49
SLC48A1-209ENST00000552003 AAASQ9NRG9 546 aa12.02□□□□□ -0.49
SLC48A1-209ENST00000552003 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.02□□□□□ -0.49
SLC48A1-209ENST00000552003 MRVI1Q9Y6F6 885 aa12.02□□□□□ -0.49
SLC48A1-209ENST00000552003 DENND4AQ7Z401 1863 aa12.02□□□□□ -0.49
SLC48A1-209ENST00000552003 IGF2RP11717 2491 aa12.01□□□□□ -0.49
SLC48A1-209ENST00000552003 GCN1Q92616 2671 aaKnown RBP12.01□□□□□ -0.49
SLC48A1-209ENST00000552003 KRBA1A5PL33 1030 aa12.01□□□□□ -0.49
SLC48A1-209ENST00000552003 POTEMA6NI47 508 aa12.01□□□□□ -0.49
SLC48A1-209ENST00000552003 H3BRB1 525 aa12.01□□□□□ -0.49
SLC48A1-209ENST00000552003 M0R2C6 588 aa12.01□□□□□ -0.49
SLC48A1-209ENST00000552003 NARSO43776 548 aaKnown RBP12.01□□□□□ -0.49
SLC48A1-209ENST00000552003 FGF18O76093 207 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms