RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 Q6ZVU0 165 aa6.4□□□□□ -1.38
HOXB3-213ENST00000552000 LRRC47Q8N1G4 583 aaKnown RBP6.4□□□□□ -1.38
HOXB3-213ENST00000552000 PRSS33Q8NF86 280 aa6.4□□□□□ -1.38
HOXB3-213ENST00000552000 OR6J1Q8NGC5 347 aa6.4□□□□□ -1.38
HOXB3-213ENST00000552000 NEK9Q8TD19 979 aa6.4□□□□□ -1.38
HOXB3-213ENST00000552000 DDRGK1Q96HY6 314 aa6.4□□□□□ -1.38
HOXB3-213ENST00000552000 MFSD14AQ96MC6 490 aa6.4□□□□□ -1.38
HOXB3-213ENST00000552000 TRERF1Q96PN7 1200 aa6.4□□□□□ -1.38
HOXB3-213ENST00000552000 RAD9AQ99638 391 aa6.4□□□□□ -1.38
HOXB3-213ENST00000552000 WDR11Q9BZH6 1224 aa6.4□□□□□ -1.38
HOXB3-213ENST00000552000 SLC4A4Q9Y6R1 1079 aa6.4□□□□□ -1.38
HOXB3-213ENST00000552000 NLRC5Q86WI3 1866 aa6.4□□□□□ -1.39
HOXB3-213ENST00000552000 MYH7BA7E2Y1 1941 aa6.4□□□□□ -1.39
HOXB3-213ENST00000552000 KAT6AQ92794 2004 aa6.4□□□□□ -1.39
HOXB3-213ENST00000552000 BAHCC1Q9P281 2608 aa6.4□□□□□ -1.39
HOXB3-213ENST00000552000 FRYLO94915 3013 aa6.39□□□□□ -1.39
HOXB3-213ENST00000552000 ATG2AQ2TAZ0 1938 aa6.39□□□□□ -1.39
HOXB3-213ENST00000552000 TMEM232C9JQI7 657 aa6.39□□□□□ -1.39
HOXB3-213ENST00000552000 BMP3P12645 472 aa6.39□□□□□ -1.39
HOXB3-213ENST00000552000 CPT1AP50416 773 aa6.39□□□□□ -1.39
HOXB3-213ENST00000552000 SNAP25P60880 206 aa6.39□□□□□ -1.39
HOXB3-213ENST00000552000 RELBQ01201 579 aa6.39□□□□□ -1.39
HOXB3-213ENST00000552000 IKQ13123 557 aaPredicted RBP6.39□□□□□ -1.39
HOXB3-213ENST00000552000 GPNMBQ14956 572 aa6.39□□□□□ -1.39
HOXB3-213ENST00000552000 TCTN1Q2MV58 587 aa6.39□□□□□ -1.39
HOXB3-213ENST00000552000 TKFCQ3LXA3 575 aa6.39□□□□□ -1.39
HOXB3-213ENST00000552000 BRDTQ58F21 947 aaPredicted RBP6.39□□□□□ -1.39
HOXB3-213ENST00000552000 MUM1L1Q5H9M0 696 aa6.39□□□□□ -1.39
HOXB3-213ENST00000552000 SLFN13Q68D06 897 aa6.39□□□□□ -1.39
HOXB3-213ENST00000552000 NFRKBQ6P4R8 1299 aa6.39□□□□□ -1.39
HOXB3-213ENST00000552000 ERC1Q8IUD2 1116 aa6.39□□□□□ -1.39
HOXB3-213ENST00000552000 ADHFE1Q8IWW8 467 aa6.39□□□□□ -1.39
HOXB3-213ENST00000552000 BEND7Q8N7W2 519 aaPredicted RBP6.39□□□□□ -1.39
HOXB3-213ENST00000552000 NEDD1Q8NHV4 660 aa6.39□□□□□ -1.39
HOXB3-213ENST00000552000 COPS5Q92905 334 aa6.39□□□□□ -1.39
HOXB3-213ENST00000552000 MRPL38Q96DV4 380 aaKnown RBP6.39□□□□□ -1.39
HOXB3-213ENST00000552000 PSMG3-AS1Q96PY0 264 aa6.39□□□□□ -1.39
HOXB3-213ENST00000552000 C17orf80Q9BSJ5 609 aa6.39□□□□□ -1.39
HOXB3-213ENST00000552000 UPF3BQ9BZI7 483 aaKnown RBP6.39□□□□□ -1.39
HOXB3-213ENST00000552000 ZMYND15Q9H091 742 aa6.39□□□□□ -1.39
HOXB3-213ENST00000552000 MKNK2Q9HBH9 465 aa6.39□□□□□ -1.39
HOXB3-213ENST00000552000 CYP39A1Q9NYL5 469 aa6.39□□□□□ -1.39
HOXB3-213ENST00000552000 MUTYHQ9UIF7 546 aa6.39□□□□□ -1.39
HOXB3-213ENST00000552000 FAM50BQ9Y247 325 aa6.39□□□□□ -1.39
HOXB3-213ENST00000552000 PCDHB15Q9Y5E8 787 aa6.39□□□□□ -1.39
HOXB3-213ENST00000552000 ZBED9Q6R2W3 1325 aa6.39□□□□□ -1.39
HOXB3-213ENST00000552000 FAM208BQ5VWN6 2430 aa6.38□□□□□ -1.39
HOXB3-213ENST00000552000 IGKV6D-41A0A0C4DH26 115 aa6.38□□□□□ -1.39
HOXB3-213ENST00000552000 KRTAP9-6A0A140TA67 174 aa6.38□□□□□ -1.39
HOXB3-213ENST00000552000 MINDY4BA8MYZ0 360 aa6.38□□□□□ -1.39
HOXB3-213ENST00000552000 K7ELQ4 463 aaPredicted RBP6.38□□□□□ -1.39
HOXB3-213ENST00000552000 PRDM1O75626 825 aa6.38□□□□□ -1.39
HOXB3-213ENST00000552000 SELPP16109 830 aa6.38□□□□□ -1.39
HOXB3-213ENST00000552000 CTSOP43234 321 aaPredicted RBP6.38□□□□□ -1.39
HOXB3-213ENST00000552000 CLUL1Q15846 466 aa6.38□□□□□ -1.39
HOXB3-213ENST00000552000 PTGISQ16647 500 aa6.38□□□□□ -1.39
HOXB3-213ENST00000552000 LRRFIP1Q32MZ4 808 aaKnown RBP6.38□□□□□ -1.39
HOXB3-213ENST00000552000 TIGD5Q53EQ6 642 aa6.38□□□□□ -1.39
HOXB3-213ENST00000552000 TCEAL5Q5H9L2 206 aa6.38□□□□□ -1.39
HOXB3-213ENST00000552000 CNKSR3Q6P9H4 555 aa6.38□□□□□ -1.39
HOXB3-213ENST00000552000 CAGE1Q8TC20 777 aa6.38□□□□□ -1.39
HOXB3-213ENST00000552000 MORC4Q8TE76 937 aa6.38□□□□□ -1.39
HOXB3-213ENST00000552000 AFAP1L1Q8TED9 768 aa6.38□□□□□ -1.39
HOXB3-213ENST00000552000 CHURC1Q8WUH1 139 aa6.38□□□□□ -1.39
HOXB3-213ENST00000552000 DHX38Q92620 1227 aaKnown RBP6.38□□□□□ -1.39
HOXB3-213ENST00000552000 MKL1Q969V6 931 aa6.38□□□□□ -1.39
HOXB3-213ENST00000552000 CEP95Q96GE4 821 aa6.38□□□□□ -1.39
HOXB3-213ENST00000552000 INSM2Q96T92 566 aaPredicted RBP6.38□□□□□ -1.39
HOXB3-213ENST00000552000 BOLA2Q9H3K6 86 aa6.38□□□□□ -1.39
HOXB3-213ENST00000552000 FAM86C1Q9NVL1 165 aa6.38□□□□□ -1.39
HOXB3-213ENST00000552000 PAG1Q9NWQ8 432 aa6.38□□□□□ -1.39
HOXB3-213ENST00000552000 CLDND1Q9NY35 253 aa6.38□□□□□ -1.39
HOXB3-213ENST00000552000 PRKAG3Q9UGI9 489 aa6.38□□□□□ -1.39
HOXB3-213ENST00000552000 PKD1L2Q7Z442 2459 aa6.38□□□□□ -1.39
HOXB3-213ENST00000552000 ZFYVE26Q68DK2 2539 aa6.38□□□□□ -1.39
HOXB3-213ENST00000552000 CNTNAP5Q8WYK1 1306 aa6.37□□□□□ -1.39
HOXB3-213ENST00000552000 RAD50Q92878 1312 aa6.37□□□□□ -1.39
HOXB3-213ENST00000552000 ABHD14A-ACY1A0A1B0GW23 586 aa6.37□□□□□ -1.39
HOXB3-213ENST00000552000 RBM47A0AV96 593 aaKnown RBP6.37□□□□□ -1.39
HOXB3-213ENST00000552000 NBNO60934 754 aa6.37□□□□□ -1.39
HOXB3-213ENST00000552000 TTLL1O95922 423 aa6.37□□□□□ -1.39
HOXB3-213ENST00000552000 CXCL10P02778 98 aa6.37□□□□□ -1.39
HOXB3-213ENST00000552000 IFIT2P09913 472 aaKnown RBP6.37□□□□□ -1.39
HOXB3-213ENST00000552000 MCCP23508 829 aa6.37□□□□□ -1.39
HOXB3-213ENST00000552000 ALDH5A1P51649 535 aaPredicted RBP6.37□□□□□ -1.39
HOXB3-213ENST00000552000 STAT2P52630 851 aa6.37□□□□□ -1.39
HOXB3-213ENST00000552000 PTPN11Q06124 597 aaPredicted RBP6.37□□□□□ -1.39
HOXB3-213ENST00000552000 DHX9Q08211 1270 aaKnown RBP6.37□□□□□ -1.39
HOXB3-213ENST00000552000 TCF15Q12870 199 aa6.37□□□□□ -1.39
HOXB3-213ENST00000552000 GPM6BQ13491 265 aa6.37□□□□□ -1.39
HOXB3-213ENST00000552000 BAATQ14032 418 aaPredicted RBP6.37□□□□□ -1.39
HOXB3-213ENST00000552000 IKBKEQ14164 716 aa6.37□□□□□ -1.39
HOXB3-213ENST00000552000 PPP2R5BQ15173 497 aa6.37□□□□□ -1.39
HOXB3-213ENST00000552000 UBE3CQ15386 1083 aa6.37□□□□□ -1.39
HOXB3-213ENST00000552000 PTPROQ16827 1216 aa6.37□□□□□ -1.39
HOXB3-213ENST00000552000 HERC4Q5GLZ8 1057 aaPredicted RBP6.37□□□□□ -1.39
HOXB3-213ENST00000552000 ZKSCAN2Q63HK3 967 aa6.37□□□□□ -1.39
HOXB3-213ENST00000552000 GDF6Q6KF10 455 aaPredicted RBP6.37□□□□□ -1.39
HOXB3-213ENST00000552000 CEP85Q6P2H3 762 aa6.37□□□□□ -1.39
HOXB3-213ENST00000552000 KCTD1Q719H9 257 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms