RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 NFASCO94856 1347 aa12.05□□□□□ -0.48
PTCH1-225ENST00000551845 IGLV3-22A0A075B6J6 115 aa12.04□□□□□ -0.48
PTCH1-225ENST00000551845 H3BRB1 525 aa12.04□□□□□ -0.48
PTCH1-225ENST00000551845 IPO5O00410 1097 aaKnown RBP12.04□□□□□ -0.48
PTCH1-225ENST00000551845 EDIL3O43854 480 aa12.04□□□□□ -0.48
PTCH1-225ENST00000551845 PQBP1O60828 265 aaKnown RBP12.04□□□□□ -0.48
PTCH1-225ENST00000551845 SUPT20HL2P0C7V6 817 aa12.04□□□□□ -0.48
PTCH1-225ENST00000551845 HOXD8P13378 290 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-225ENST00000551845 GJB2P29033 226 aa12.04□□□□□ -0.48
PTCH1-225ENST00000551845 PTPN11Q06124 597 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-225ENST00000551845 NR5A1Q13285 461 aa12.04□□□□□ -0.48
PTCH1-225ENST00000551845 SHHQ15465 462 aa12.04□□□□□ -0.48
PTCH1-225ENST00000551845 NBPF20Q3BBV1 942 aa12.04□□□□□ -0.48
PTCH1-225ENST00000551845 Q4G0T1 1027 aa12.04□□□□□ -0.48
PTCH1-225ENST00000551845 FAM47CQ5HY64 1035 aa12.04□□□□□ -0.48
PTCH1-225ENST00000551845 UTP14CQ5TAP6 766 aaKnown RBP12.04□□□□□ -0.48
PTCH1-225ENST00000551845 PPP4R3AQ6IN85 833 aa12.04□□□□□ -0.48
PTCH1-225ENST00000551845 NFRKBQ6P4R8 1299 aa12.04□□□□□ -0.48
PTCH1-225ENST00000551845 SLC43A3Q8NBI5 491 aa12.04□□□□□ -0.48
PTCH1-225ENST00000551845 SNX21Q969T3 373 aa12.04□□□□□ -0.48
PTCH1-225ENST00000551845 FOXP1Q9H334 677 aaPredicted RBP12.04□□□□□ -0.48
PTCH1-225ENST00000551845 TUT1Q9H6E5 874 aaKnown RBP12.04□□□□□ -0.48
PTCH1-225ENST00000551845 TMEM39AQ9NV64 488 aa12.04□□□□□ -0.48
PTCH1-225ENST00000551845 TCEAL9Q9UHQ7 104 aa12.04□□□□□ -0.48
PTCH1-225ENST00000551845 GRIN2DO15399 1336 aa12.04□□□□□ -0.48
PTCH1-225ENST00000551845 FRMPD3Q5JV73 1810 aa12.03□□□□□ -0.48
PTCH1-225ENST00000551845 GSTTP1A0A1W2PQM5 241 aa12.03□□□□□ -0.48
PTCH1-225ENST00000551845 H3BQV1 296 aa12.03□□□□□ -0.48
PTCH1-225ENST00000551845 K7ELQ4 463 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-225ENST00000551845 MARCH6O60337 910 aa12.03□□□□□ -0.48
PTCH1-225ENST00000551845 CCNT1O60563 726 aaKnown RBP12.03□□□□□ -0.48
PTCH1-225ENST00000551845 CLTBP09497 229 aa12.03□□□□□ -0.48
PTCH1-225ENST00000551845 GCFC2P16383 781 aaKnown RBP12.03□□□□□ -0.48
PTCH1-225ENST00000551845 PSEN2P49810 448 aa12.03□□□□□ -0.48
PTCH1-225ENST00000551845 CUL4AQ13619 759 aa12.03□□□□□ -0.48
PTCH1-225ENST00000551845 KIAA0753Q2KHM9 967 aa12.03□□□□□ -0.48
PTCH1-225ENST00000551845 LARP1BQ659C4 914 aaKnown RBP12.03□□□□□ -0.48
PTCH1-225ENST00000551845 C7orf31Q8N865 590 aa12.03□□□□□ -0.48
PTCH1-225ENST00000551845 KAT2BQ92831 832 aa12.03□□□□□ -0.48
PTCH1-225ENST00000551845 RIT2Q99578 217 aa12.03□□□□□ -0.48
PTCH1-225ENST00000551845 C16orf70Q9BSU1 422 aa12.03□□□□□ -0.48
PTCH1-225ENST00000551845 SMARCAD1Q9H4L7 1026 aa12.03□□□□□ -0.48
PTCH1-225ENST00000551845 AZI2Q9H6S1 392 aa12.03□□□□□ -0.48
PTCH1-225ENST00000551845 PRDM5Q9NQX1 630 aaPredicted RBP12.03□□□□□ -0.48
PTCH1-225ENST00000551845 DDX25Q9UHL0 483 aaKnown RBP12.03□□□□□ -0.48
PTCH1-225ENST00000551845 MYH6P13533 1939 aa12.02□□□□□ -0.49
PTCH1-225ENST00000551845 DDX39AO00148 427 aaKnown RBP12.02□□□□□ -0.49
PTCH1-225ENST00000551845 HAS3O00219 553 aa12.02□□□□□ -0.49
PTCH1-225ENST00000551845 TNFRSF10AO00220 468 aa12.02□□□□□ -0.49
PTCH1-225ENST00000551845 MSH4O15457 936 aa12.02□□□□□ -0.49
PTCH1-225ENST00000551845 DHX15O43143 795 aaKnown RBP12.02□□□□□ -0.49
PTCH1-225ENST00000551845 BAG4O95429 457 aaKnown RBP12.02□□□□□ -0.49
PTCH1-225ENST00000551845 TDP2O95551 362 aa12.02□□□□□ -0.49
PTCH1-225ENST00000551845 LGALS2P05162 132 aa12.02□□□□□ -0.49
PTCH1-225ENST00000551845 TCF7P36402 384 aaPredicted RBP12.02□□□□□ -0.49
PTCH1-225ENST00000551845 FAAP100Q0VG06 881 aa12.02□□□□□ -0.49
PTCH1-225ENST00000551845 ITGB3BPQ13352 177 aaPredicted RBP12.02□□□□□ -0.49
PTCH1-225ENST00000551845 MFSD10Q14728 455 aa12.02□□□□□ -0.49
PTCH1-225ENST00000551845 EARS2Q5JPH6 523 aaKnown RBP12.02□□□□□ -0.49
PTCH1-225ENST00000551845 TJAP1Q5JTD0 557 aa12.02□□□□□ -0.49
PTCH1-225ENST00000551845 C9orf50Q5SZB4 431 aa12.02□□□□□ -0.49
PTCH1-225ENST00000551845 FAM126BQ8IXS8 530 aa12.02□□□□□ -0.49
PTCH1-225ENST00000551845 GLG1Q92896 1179 aa12.02□□□□□ -0.49
PTCH1-225ENST00000551845 TNPO1Q92973 898 aaKnown RBP12.02□□□□□ -0.49
PTCH1-225ENST00000551845 TNFRSF25Q93038 417 aa12.02□□□□□ -0.49
PTCH1-225ENST00000551845 INTS4Q96HW7 963 aaKnown RBP12.02□□□□□ -0.49
PTCH1-225ENST00000551845 MBOAT7Q96N66 472 aa12.02□□□□□ -0.49
PTCH1-225ENST00000551845 UIMC1Q96RL1 719 aa12.02□□□□□ -0.49
PTCH1-225ENST00000551845 RAPGEFL1Q9UHV5 662 aa12.02□□□□□ -0.49
PTCH1-225ENST00000551845 ZNF215Q9UL58 517 aaPredicted RBP12.02□□□□□ -0.49
PTCH1-225ENST00000551845 NOD1Q9Y239 953 aa12.02□□□□□ -0.49
PTCH1-225ENST00000551845 LTBP2Q14767 1821 aa12.02□□□□□ -0.49
PTCH1-225ENST00000551845 GAS7O60861 476 aa12.01□□□□□ -0.49
PTCH1-225ENST00000551845 ATG7O95352 703 aa12.01□□□□□ -0.49
PTCH1-225ENST00000551845 F2P00734 622 aa12.01□□□□□ -0.49
PTCH1-225ENST00000551845 CD4P01730 458 aa12.01□□□□□ -0.49
PTCH1-225ENST00000551845 ZNF286BP0CG31 522 aa12.01□□□□□ -0.49
PTCH1-225ENST00000551845 RAG1P15918 1043 aa12.01□□□□□ -0.49
PTCH1-225ENST00000551845 ATP2B1P20020 1258 aa12.01□□□□□ -0.49
PTCH1-225ENST00000551845 STAT5BP51692 787 aa12.01□□□□□ -0.49
PTCH1-225ENST00000551845 ACTR2P61160 394 aa12.01□□□□□ -0.49
PTCH1-225ENST00000551845 SMAD3P84022 425 aaKnown RBP12.01□□□□□ -0.49
PTCH1-225ENST00000551845 KRT76Q01546 638 aa12.01□□□□□ -0.49
PTCH1-225ENST00000551845 MCTP1Q6DN14 999 aa12.01□□□□□ -0.49
PTCH1-225ENST00000551845 ZNF746Q6NUN9 644 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-225ENST00000551845 MIS18BP1Q6P0N0 1132 aa12.01□□□□□ -0.49
PTCH1-225ENST00000551845 PLPPR4Q7Z2D5 763 aa12.01□□□□□ -0.49
PTCH1-225ENST00000551845 SESTD1Q86VW0 696 aa12.01□□□□□ -0.49
PTCH1-225ENST00000551845 HSCBQ8IWL3 235 aa12.01□□□□□ -0.49
PTCH1-225ENST00000551845 SMAP1Q8IYB5 467 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-225ENST00000551845 SLC5A5Q92911 643 aa12.01□□□□□ -0.49
PTCH1-225ENST00000551845 LENG9Q96B70 501 aa12.01□□□□□ -0.49
PTCH1-225ENST00000551845 FAM20AQ96MK3 541 aa12.01□□□□□ -0.49
PTCH1-225ENST00000551845 TEKT3Q9BXF9 490 aa12.01□□□□□ -0.49
PTCH1-225ENST00000551845 TRPV6Q9H1D0 765 aa12.01□□□□□ -0.49
PTCH1-225ENST00000551845 TTYH1Q9H313 450 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-225ENST00000551845 ERAP1Q9NZ08 941 aa12.01□□□□□ -0.49
PTCH1-225ENST00000551845 HDAC6Q9UBN7 1215 aa12.01□□□□□ -0.49
PTCH1-225ENST00000551845 TRIM43BA6NCK2 446 aa12□□□□□ -0.49
PTCH1-225ENST00000551845 BACH1O14867 736 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms