RNA–Protein interactions for RNA: ENST00000551567.1

TROAP-216, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-216ENST00000551567 ARHGAP4P98171 946 aa26.45■■□□□ 1.82
TROAP-216ENST00000551567 FGD1P98174 961 aa26.45■■□□□ 1.82
TROAP-216ENST00000551567 LMBR1Q8WVP7 490 aa26.45■■□□□ 1.82
TROAP-216ENST00000551567 V9GY48 417 aaPredicted RBP26.45■■□□□ 1.82
TROAP-216ENST00000551567 EFCAB14O75071 495 aa26.44■■□□□ 1.82
TROAP-216ENST00000551567 HMGB1P09429 215 aaKnown RBP26.44■■□□□ 1.82
TROAP-216ENST00000551567 GNAT1P11488 350 aa26.44■■□□□ 1.82
TROAP-216ENST00000551567 CDC27P30260 824 aa26.44■■□□□ 1.82
TROAP-216ENST00000551567 PPP1R18Q6NYC8 613 aa26.44■■□□□ 1.82
TROAP-216ENST00000551567 FAM117BQ6P1L5 589 aa26.44■■□□□ 1.82
TROAP-216ENST00000551567 DBF4BQ8NFT6 615 aa26.44■■□□□ 1.82
TROAP-216ENST00000551567 RIC8AQ9NPQ8 531 aa26.44■■□□□ 1.82
TROAP-216ENST00000551567 JADE2Q9NQC1 790 aa26.44■■□□□ 1.82
TROAP-216ENST00000551567 THEGQ9P2T0 379 aa26.44■■□□□ 1.82
TROAP-216ENST00000551567 PRRC2BQ5JSZ5 2229 aaKnown RBP26.43■■□□□ 1.82
TROAP-216ENST00000551567 TTC28Q96AY4 2481 aa26.43■■□□□ 1.82
TROAP-216ENST00000551567 STXBP3O00186 592 aa26.43■■□□□ 1.82
TROAP-216ENST00000551567 ADCY7P51828 1080 aa26.43■■□□□ 1.82
TROAP-216ENST00000551567 TJAP1Q5JTD0 557 aa26.43■■□□□ 1.82
TROAP-216ENST00000551567 JAKMIP1Q96N16 626 aaKnown RBP26.43■■□□□ 1.82
TROAP-216ENST00000551567 FAM217BQ9NTX9 383 aaPredicted RBP26.43■■□□□ 1.82
TROAP-216ENST00000551567 SIP14410 1827 aa26.42■■□□□ 1.82
TROAP-216ENST00000551567 GSTTP1A0A1W2PQM5 241 aa26.42■■□□□ 1.82
TROAP-216ENST00000551567 GJB5O95377 273 aa26.42■■□□□ 1.82
TROAP-216ENST00000551567 MARK3P27448 753 aa26.42■■□□□ 1.82
TROAP-216ENST00000551567 APOBRQ0VD83 1088 aa26.42■■□□□ 1.82
TROAP-216ENST00000551567 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.42■■□□□ 1.82
TROAP-216ENST00000551567 SEPT1Q8WYJ6 367 aa26.42■■□□□ 1.82
TROAP-216ENST00000551567 ANO3Q9BYT9 981 aa26.42■■□□□ 1.82
TROAP-216ENST00000551567 OSBPL7Q9BZF2 842 aa26.42■■□□□ 1.82
TROAP-216ENST00000551567 hCG_1984214I3L0E3 225 aa26.41■■□□□ 1.82
TROAP-216ENST00000551567 GTPBP6O43824 516 aaPredicted RBP26.41■■□□□ 1.82
TROAP-216ENST00000551567 CAND2O75155 1236 aa26.41■■□□□ 1.82
TROAP-216ENST00000551567 ADAM17P78536 824 aa26.41■■□□□ 1.82
TROAP-216ENST00000551567 PLEKHG4Q58EX7 1191 aa26.41■■□□□ 1.82
TROAP-216ENST00000551567 KRT40Q6A162 431 aa26.41■■□□□ 1.82
TROAP-216ENST00000551567 Q6ZUG5 572 aa26.41■■□□□ 1.82
TROAP-216ENST00000551567 ZNF713Q8N859 430 aaPredicted RBP26.41■■□□□ 1.82
TROAP-216ENST00000551567 SYMPKQ92797 1274 aaKnown RBP26.41■■□□□ 1.82
TROAP-216ENST00000551567 TMEM260Q9NX78 707 aa26.41■■□□□ 1.82
TROAP-216ENST00000551567 BARHL2Q9NY43 387 aa26.41■■□□□ 1.82
TROAP-216ENST00000551567 SNX14Q9Y5W7 946 aa26.41■■□□□ 1.82
TROAP-216ENST00000551567 MTCH2Q9Y6C9 303 aa26.41■■□□□ 1.82
TROAP-216ENST00000551567 NRCAMQ92823 1304 aa26.4■■□□□ 1.82
TROAP-216ENST00000551567 SMCO2A6NFE2 343 aa26.4■■□□□ 1.82
TROAP-216ENST00000551567 METAP2P50579 478 aaKnown RBP eCLIP26.4■■□□□ 1.82
TROAP-216ENST00000551567 RCAN1P53805 252 aa26.4■■□□□ 1.82
TROAP-216ENST00000551567 MYOCDQ8IZQ8 938 aa26.4■■□□□ 1.82
TROAP-216ENST00000551567 CYP2W1Q8TAV3 490 aa26.4■■□□□ 1.82
TROAP-216ENST00000551567 GLG1Q92896 1179 aa26.4■■□□□ 1.82
TROAP-216ENST00000551567 KCNB2Q92953 911 aa26.4■■□□□ 1.82
TROAP-216ENST00000551567 BRF1Q92994 677 aa26.4■■□□□ 1.82
TROAP-216ENST00000551567 RAD9AQ99638 391 aa26.4■■□□□ 1.82
TROAP-216ENST00000551567 MXRA8Q9BRK3 442 aa26.4■■□□□ 1.82
TROAP-216ENST00000551567 KCNH7Q9NS40 1196 aa26.4■■□□□ 1.82
TROAP-216ENST00000551567 MTUS1Q9ULD2 1270 aa26.4■■□□□ 1.82
TROAP-216ENST00000551567 MAFGO15525 162 aa26.39■■□□□ 1.82
TROAP-216ENST00000551567 HSPA4P34932 840 aa26.39■■□□□ 1.82
TROAP-216ENST00000551567 ADD1P35611 737 aaKnown RBP26.39■■□□□ 1.82
TROAP-216ENST00000551567 PPFIA1Q13136 1202 aa26.39■■□□□ 1.82
TROAP-216ENST00000551567 BLOC1S2Q6QNY1 142 aa26.39■■□□□ 1.82
TROAP-216ENST00000551567 RUFY4Q6ZNE9 571 aa26.39■■□□□ 1.82
TROAP-216ENST00000551567 SEPT8Q92599 483 aa26.39■■□□□ 1.82
TROAP-216ENST00000551567 JPH1Q9HDC5 661 aaPredicted RBP26.39■■□□□ 1.82
TROAP-216ENST00000551567 ERAP1Q9NZ08 941 aa26.39■■□□□ 1.82
TROAP-216ENST00000551567 FOSP01100 380 aaPredicted RBP26.38■■□□□ 1.81
TROAP-216ENST00000551567 AMHP03971 560 aa26.38■■□□□ 1.81
TROAP-216ENST00000551567 MKRN4PQ13434 485 aaPredicted RBP26.38■■□□□ 1.81
TROAP-216ENST00000551567 SKIV2LQ15477 1246 aaKnown RBP26.38■■□□□ 1.81
TROAP-216ENST00000551567 ATXN2LQ8WWM7 1075 aaKnown RBP26.38■■□□□ 1.81
TROAP-216ENST00000551567 SLC9A2Q9UBY0 812 aa26.38■■□□□ 1.81
TROAP-216ENST00000551567 POU3F3P20264 500 aaPredicted RBP26.37■■□□□ 1.81
TROAP-216ENST00000551567 GRB10Q13322 594 aa26.37■■□□□ 1.81
TROAP-216ENST00000551567 GRIK4Q16099 956 aa26.37■■□□□ 1.81
TROAP-216ENST00000551567 GDPD5Q8WTR4 605 aa26.37■■□□□ 1.81
TROAP-216ENST00000551567 TSPYL2Q9H2G4 693 aaPredicted RBP26.37■■□□□ 1.81
TROAP-216ENST00000551567 SMARCAD1Q9H4L7 1026 aa26.37■■□□□ 1.81
TROAP-216ENST00000551567 LINC01553A4QN01 128 aa26.36■■□□□ 1.81
TROAP-216ENST00000551567 ARP10275 920 aa26.36■■□□□ 1.81
TROAP-216ENST00000551567 AP3B2Q13367 1082 aa26.36■■□□□ 1.81
TROAP-216ENST00000551567 PFKFB3Q16875 520 aaPredicted RBP26.36■■□□□ 1.81
TROAP-216ENST00000551567 CEP55Q53EZ4 464 aa26.36■■□□□ 1.81
TROAP-216ENST00000551567 TEX2Q8IWB9 1127 aa26.36■■□□□ 1.81
TROAP-216ENST00000551567 ASB2Q96Q27 587 aa26.36■■□□□ 1.81
TROAP-216ENST00000551567 PCYT2Q99447 389 aa26.36■■□□□ 1.81
TROAP-216ENST00000551567 SDF4Q9BRK5 362 aa26.36■■□□□ 1.81
TROAP-216ENST00000551567 TUBE1Q9UJT0 475 aa26.36■■□□□ 1.81
TROAP-216ENST00000551567 CCDC196A0A1B0GTZ2 297 aa26.35■■□□□ 1.81
TROAP-216ENST00000551567 LPXNO60711 386 aa26.35■■□□□ 1.81
TROAP-216ENST00000551567 SCG2P13521 617 aa26.35■■□□□ 1.81
TROAP-216ENST00000551567 SREBF1P36956 1147 aa26.35■■□□□ 1.81
TROAP-216ENST00000551567 CLK2P49760 499 aaKnown RBP26.35■■□□□ 1.81
TROAP-216ENST00000551567 IGBP1P78318 339 aa26.35■■□□□ 1.81
TROAP-216ENST00000551567 MRPS5P82675 430 aaKnown RBP26.35■■□□□ 1.81
TROAP-216ENST00000551567 ITGB3BPQ13352 177 aaPredicted RBP26.35■■□□□ 1.81
TROAP-216ENST00000551567 FAM26DQ5JW98 314 aa26.35■■□□□ 1.81
TROAP-216ENST00000551567 JAKMIP3Q5VZ66 844 aa26.35■■□□□ 1.81
TROAP-216ENST00000551567 GLT8D2Q9H1C3 349 aa26.35■■□□□ 1.81
TROAP-216ENST00000551567 REC8O95072 547 aa26.34■■□□□ 1.81
TROAP-216ENST00000551567 RPS6KB1P23443 525 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms