RNA–Protein interactions for RNA: ENST00000551179.1

CNOT2-229, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 355 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-229ENST00000551179 TOGARAM2Q6ZUX3 1019 aa11.32□□□□□ -0.6
CNOT2-229ENST00000551179 KIAA1328Q86T90 577 aa11.32□□□□□ -0.6
CNOT2-229ENST00000551179 NEK11Q8NG66 645 aa11.32□□□□□ -0.6
CNOT2-229ENST00000551179 ACER1Q8TDN7 264 aa11.32□□□□□ -0.6
CNOT2-229ENST00000551179 FBXO41Q8TF61 875 aa11.32□□□□□ -0.6
CNOT2-229ENST00000551179 DUSP9Q99956 384 aaKnown RBP11.32□□□□□ -0.6
CNOT2-229ENST00000551179 NUCKS1Q9H1E3 243 aaKnown RBP11.32□□□□□ -0.6
CNOT2-229ENST00000551179 DEF6Q9H4E7 631 aa11.32□□□□□ -0.6
CNOT2-229ENST00000551179 PICK1Q9NRD5 415 aa11.32□□□□□ -0.6
CNOT2-229ENST00000551179 MAP3K20Q9NYL2 800 aaKnown RBP11.32□□□□□ -0.6
CNOT2-229ENST00000551179 FAM184BQ9ULE4 1060 aa11.32□□□□□ -0.6
CNOT2-229ENST00000551179 CAPN11Q9UMQ6 739 aa11.32□□□□□ -0.6
CNOT2-229ENST00000551179 BCS1LQ9Y276 419 aa11.32□□□□□ -0.6
CNOT2-229ENST00000551179 E9PMD0 336 aa11.31□□□□□ -0.6
CNOT2-229ENST00000551179 TRAF5O00463 557 aa11.31□□□□□ -0.6
CNOT2-229ENST00000551179 CTNND1O60716 968 aaKnown RBP11.31□□□□□ -0.6
CNOT2-229ENST00000551179 FAM13AO94988 1023 aa11.31□□□□□ -0.6
CNOT2-229ENST00000551179 EYA4O95677 639 aa11.31□□□□□ -0.6
CNOT2-229ENST00000551179 ICAM1P05362 532 aa11.31□□□□□ -0.6
CNOT2-229ENST00000551179 FXR1P51114 621 aaKnown RBP eCLIP11.31□□□□□ -0.6
CNOT2-229ENST00000551179 PMS1P54277 932 aaKnown RBP11.31□□□□□ -0.6
CNOT2-229ENST00000551179 ZNF280AP59817 542 aaPredicted RBP11.31□□□□□ -0.6
CNOT2-229ENST00000551179 SPA17Q15506 151 aa11.31□□□□□ -0.6
CNOT2-229ENST00000551179 KIF4BQ2VIQ3 1234 aa11.31□□□□□ -0.6
CNOT2-229ENST00000551179 EDRF1Q3B7T1 1238 aa11.31□□□□□ -0.6
CNOT2-229ENST00000551179 ARHGAP27Q6ZUM4 889 aa11.31□□□□□ -0.6
CNOT2-229ENST00000551179 MIGA2Q7L4E1 593 aa11.31□□□□□ -0.6
CNOT2-229ENST00000551179 CACNA2D4Q7Z3S7 1137 aa11.31□□□□□ -0.6
CNOT2-229ENST00000551179 LDHDQ86WU2 507 aa11.31□□□□□ -0.6
CNOT2-229ENST00000551179 REXO1L1PQ8IX06 675 aa11.31□□□□□ -0.6
CNOT2-229ENST00000551179 CCDC170Q8IYT3 715 aa11.31□□□□□ -0.6
CNOT2-229ENST00000551179 SYT2Q8N9I0 419 aaPredicted RBP11.31□□□□□ -0.6
CNOT2-229ENST00000551179 PRPF38AQ8NAV1 312 aaKnown RBP11.31□□□□□ -0.6
CNOT2-229ENST00000551179 UBXN4Q92575 508 aa11.31□□□□□ -0.6
CNOT2-229ENST00000551179 ERGIC2Q96RQ1 377 aa11.31□□□□□ -0.6
CNOT2-229ENST00000551179 ZNF577Q9BSK1 485 aa11.31□□□□□ -0.6
CNOT2-229ENST00000551179 KIAA1683Q9H0B3 1180 aa11.31□□□□□ -0.6
CNOT2-229ENST00000551179 HAUS4Q9H6D7 363 aa11.31□□□□□ -0.6
CNOT2-229ENST00000551179 KCND2Q9NZV8 630 aa11.31□□□□□ -0.6
CNOT2-229ENST00000551179 CD2APQ9Y5K6 639 aa11.31□□□□□ -0.6
CNOT2-229ENST00000551179 ADGRG1Q9Y653 693 aa11.31□□□□□ -0.6
CNOT2-229ENST00000551179 GJA3Q9Y6H8 435 aa11.31□□□□□ -0.6
CNOT2-229ENST00000551179 UBE4BO95155 1302 aa11.31□□□□□ -0.6
CNOT2-229ENST00000551179 CTAGE9A4FU28 777 aa11.3□□□□□ -0.6
CNOT2-229ENST00000551179 MSH4O15457 936 aa11.3□□□□□ -0.6
CNOT2-229ENST00000551179 KRT86O43790 486 aa11.3□□□□□ -0.6
CNOT2-229ENST00000551179 USO1O60763 962 aaKnown RBP11.3□□□□□ -0.6
CNOT2-229ENST00000551179 MED24O75448 989 aa11.3□□□□□ -0.6
CNOT2-229ENST00000551179 CYP11B2P19099 503 aa11.3□□□□□ -0.6
CNOT2-229ENST00000551179 POTEEQ6S8J3 1075 aa11.3□□□□□ -0.6
CNOT2-229ENST00000551179 CEP112Q8N8E3 955 aa11.3□□□□□ -0.6
CNOT2-229ENST00000551179 ZBED3Q96IU2 234 aaPredicted RBP11.3□□□□□ -0.6
CNOT2-229ENST00000551179 EIF2AK1Q9BQI3 630 aaKnown RBP11.3□□□□□ -0.6
CNOT2-229ENST00000551179 DESI2Q9BSY9 194 aa11.3□□□□□ -0.6
CNOT2-229ENST00000551179 EDEM3Q9BZQ6 932 aa11.3□□□□□ -0.6
CNOT2-229ENST00000551179 NDST4Q9H3R1 872 aa11.3□□□□□ -0.6
CNOT2-229ENST00000551179 L2HGDHQ9H9P8 463 aa11.3□□□□□ -0.6
CNOT2-229ENST00000551179 LZTFL1Q9NQ48 299 aa11.3□□□□□ -0.6
CNOT2-229ENST00000551179 SEL1LQ9UBV2 794 aa11.3□□□□□ -0.6
CNOT2-229ENST00000551179 PPP2R3BQ9Y5P8 575 aa11.3□□□□□ -0.6
CNOT2-229ENST00000551179 MYH7BA7E2Y1 1941 aa11.3□□□□□ -0.6
CNOT2-229ENST00000551179 TTC26A0AVF1 554 aa11.29□□□□□ -0.6
CNOT2-229ENST00000551179 ARHGEF35A5YM69 484 aa11.29□□□□□ -0.6
CNOT2-229ENST00000551179 SLC34A2O95436 690 aa11.29□□□□□ -0.6
CNOT2-229ENST00000551179 EPB41P11171 864 aaKnown RBP11.29□□□□□ -0.6
CNOT2-229ENST00000551179 STAT3P40763 770 aa11.29□□□□□ -0.6
CNOT2-229ENST00000551179 SLC12A3P55017 1021 aa11.29□□□□□ -0.6
CNOT2-229ENST00000551179 MAP3K10Q02779 954 aa11.29□□□□□ -0.6
CNOT2-229ENST00000551179 PABPC4Q13310 644 aaKnown RBP eCLIP11.29□□□□□ -0.6
CNOT2-229ENST00000551179 PPP2R5CQ13362 524 aa11.29□□□□□ -0.6
CNOT2-229ENST00000551179 RRP1BQ14684 758 aaKnown RBP11.29□□□□□ -0.6
CNOT2-229ENST00000551179 NBPF9Q3BBW0 867 aa11.29□□□□□ -0.6
CNOT2-229ENST00000551179 CEP55Q53EZ4 464 aa11.29□□□□□ -0.6
CNOT2-229ENST00000551179 RAD9BQ6WBX8 426 aa11.29□□□□□ -0.6
CNOT2-229ENST00000551179 NIPA1Q7RTP0 329 aa11.29□□□□□ -0.6
CNOT2-229ENST00000551179 KCNK18Q7Z418 384 aa11.29□□□□□ -0.6
CNOT2-229ENST00000551179 IRF2BP1Q8IU81 584 aa11.29□□□□□ -0.6
CNOT2-229ENST00000551179 FMNL3Q8IVF7 1028 aa11.29□□□□□ -0.6
CNOT2-229ENST00000551179 NELFCDQ8IXH7 590 aa11.29□□□□□ -0.6
CNOT2-229ENST00000551179 LRRC15Q8TF66 581 aa11.29□□□□□ -0.6
CNOT2-229ENST00000551179 CRYGNQ8WXF5 182 aa11.29□□□□□ -0.6
CNOT2-229ENST00000551179 GOLGA1Q92805 767 aa11.29□□□□□ -0.6
CNOT2-229ENST00000551179 DNAJC19Q96DA6 116 aa11.29□□□□□ -0.6
CNOT2-229ENST00000551179 NACC1Q96RE7 527 aa11.29□□□□□ -0.6
CNOT2-229ENST00000551179 DNAJC7Q99615 494 aa11.29□□□□□ -0.6
CNOT2-229ENST00000551179 NAPGQ99747 312 aaPredicted RBP11.29□□□□□ -0.6
CNOT2-229ENST00000551179 NUDT12Q9BQG2 462 aa11.29□□□□□ -0.6
CNOT2-229ENST00000551179 SEMA6BQ9H3T3 888 aa11.29□□□□□ -0.6
CNOT2-229ENST00000551179 MMRN2Q9H8L6 949 aa11.29□□□□□ -0.6
CNOT2-229ENST00000551179 METTL14Q9HCE5 456 aaKnown RBP11.29□□□□□ -0.6
CNOT2-229ENST00000551179 EMILIN3Q9NT22 766 aa11.29□□□□□ -0.6
CNOT2-229ENST00000551179 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.29□□□□□ -0.6
CNOT2-229ENST00000551179 COL4A5P29400 1685 aa11.28□□□□□ -0.6
CNOT2-229ENST00000551179 EFCAB8A8MWE9 144 aa11.28□□□□□ -0.6
CNOT2-229ENST00000551179 FAM86B1E9PN63 330 aa11.28□□□□□ -0.6
CNOT2-229ENST00000551179 EIF3DO15371 548 aaKnown RBP eCLIP11.28□□□□□ -0.6
CNOT2-229ENST00000551179 SLC16A3O15427 465 aaKnown RBP11.28□□□□□ -0.6
CNOT2-229ENST00000551179 CHMP2AO43633 222 aa11.28□□□□□ -0.6
CNOT2-229ENST00000551179 EDIL3O43854 480 aa11.28□□□□□ -0.6
CNOT2-229ENST00000551179 FLOT1O75955 427 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms