RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 C6orf50Q9HD87 102 aa22.78■■□□□ 1.24
GCN1-207ENST00000550471 JPH1Q9HDC5 661 aaPredicted RBP22.78■■□□□ 1.24
GCN1-207ENST00000550471 FAM217BQ9NTX9 383 aaPredicted RBP22.78■■□□□ 1.24
GCN1-207ENST00000550471 PRPF3O43395 683 aaKnown RBP22.77■■□□□ 1.24
GCN1-207ENST00000550471 SREBF1P36956 1147 aa22.77■■□□□ 1.24
GCN1-207ENST00000550471 EVCP57679 992 aa22.77■■□□□ 1.24
GCN1-207ENST00000550471 GPNMBQ14956 572 aa22.77■■□□□ 1.24
GCN1-207ENST00000550471 TRAF7Q6Q0C0 670 aa22.77■■□□□ 1.24
GCN1-207ENST00000550471 CCDC148Q8NFR7 591 aa22.77■■□□□ 1.24
GCN1-207ENST00000550471 SYMPKQ92797 1274 aaKnown RBP22.77■■□□□ 1.24
GCN1-207ENST00000550471 APBB2Q92870 758 aa22.77■■□□□ 1.24
GCN1-207ENST00000550471 ZBED2Q9BTP6 218 aa22.77■■□□□ 1.24
GCN1-207ENST00000550471 TSPYL2Q9H2G4 693 aaPredicted RBP22.77■■□□□ 1.24
GCN1-207ENST00000550471 KCNH7Q9NS40 1196 aa22.77■■□□□ 1.24
GCN1-207ENST00000550471 SCN5AQ14524 2016 aa22.77■■□□□ 1.24
GCN1-207ENST00000550471 LAMA2P24043 3122 aaKnown RBP22.76■■□□□ 1.23
GCN1-207ENST00000550471 RRN3P2A6NIE6 340 aa22.76■■□□□ 1.23
GCN1-207ENST00000550471 TLL1O43897 1013 aa22.76■■□□□ 1.23
GCN1-207ENST00000550471 ATP9AO75110 1047 aa22.76■■□□□ 1.23
GCN1-207ENST00000550471 CDC27P30260 824 aa22.76■■□□□ 1.23
GCN1-207ENST00000550471 CLK2P49760 499 aaKnown RBP22.76■■□□□ 1.23
GCN1-207ENST00000550471 SLC26A2P50443 739 aa22.76■■□□□ 1.23
GCN1-207ENST00000550471 ZNF200P98182 395 aaPredicted RBP22.76■■□□□ 1.23
GCN1-207ENST00000550471 APOBRQ0VD83 1088 aa22.76■■□□□ 1.23
GCN1-207ENST00000550471 FAM177A1Q8N128 213 aaPredicted RBP22.76■■□□□ 1.23
GCN1-207ENST00000550471 SEPT8Q92599 483 aa22.76■■□□□ 1.23
GCN1-207ENST00000550471 GLG1Q92896 1179 aa22.76■■□□□ 1.23
GCN1-207ENST00000550471 ZMYND12Q9H0C1 365 aa22.76■■□□□ 1.23
GCN1-207ENST00000550471 BCAS3Q9H6U6 928 aa22.76■■□□□ 1.23
GCN1-207ENST00000550471 SLC9A2Q9UBY0 812 aa22.76■■□□□ 1.23
GCN1-207ENST00000550471 COL6A3P12111 3177 aa22.76■■□□□ 1.23
GCN1-207ENST00000550471 TREHO43280 583 aa22.75■■□□□ 1.23
GCN1-207ENST00000550471 GTPBP6O43824 516 aaPredicted RBP22.75■■□□□ 1.23
GCN1-207ENST00000550471 AMHP03971 560 aa22.75■■□□□ 1.23
GCN1-207ENST00000550471 CA3P07451 260 aa22.75■■□□□ 1.23
GCN1-207ENST00000550471 POU3F3P20264 500 aaPredicted RBP22.75■■□□□ 1.23
GCN1-207ENST00000550471 ADD1P35611 737 aaKnown RBP22.75■■□□□ 1.23
GCN1-207ENST00000550471 ZNF76P36508 570 aa22.75■■□□□ 1.23
GCN1-207ENST00000550471 ADAM17P78536 824 aa22.75■■□□□ 1.23
GCN1-207ENST00000550471 ARHGAP4P98171 946 aa22.75■■□□□ 1.23
GCN1-207ENST00000550471 SP4Q02446 784 aa22.75■■□□□ 1.23
GCN1-207ENST00000550471 FAM26DQ5JW98 314 aa22.75■■□□□ 1.23
GCN1-207ENST00000550471 RAD9AQ99638 391 aa22.75■■□□□ 1.23
GCN1-207ENST00000550471 RNF26Q9BY78 433 aaPredicted RBP22.75■■□□□ 1.23
GCN1-207ENST00000550471 TM6SF1Q9BZW5 370 aa22.75■■□□□ 1.23
GCN1-207ENST00000550471 SETD4Q9NVD3 440 aa22.75■■□□□ 1.23
GCN1-207ENST00000550471 GSTTP1A0A1W2PQM5 241 aa22.74■■□□□ 1.23
GCN1-207ENST00000550471 MEIS1O00470 390 aa22.74■■□□□ 1.23
GCN1-207ENST00000550471 CYP3A4P08684 503 aa22.74■■□□□ 1.23
GCN1-207ENST00000550471 PPFIA1Q13136 1202 aa22.74■■□□□ 1.23
GCN1-207ENST00000550471 PLEKHG4Q58EX7 1191 aa22.74■■□□□ 1.23
GCN1-207ENST00000550471 TYW1BQ6NUM6 668 aa22.74■■□□□ 1.23
GCN1-207ENST00000550471 RUFY3Q7L099 469 aa22.74■■□□□ 1.23
GCN1-207ENST00000550471 PLPPR4Q7Z2D5 763 aa22.74■■□□□ 1.23
GCN1-207ENST00000550471 LMBR1Q8WVP7 490 aa22.74■■□□□ 1.23
GCN1-207ENST00000550471 CYP46A1Q9Y6A2 500 aa22.74■■□□□ 1.23
GCN1-207ENST00000550471 GJB5O95377 273 aa22.73■■□□□ 1.23
GCN1-207ENST00000550471 IFNAR1P17181 557 aa22.73■■□□□ 1.23
GCN1-207ENST00000550471 IGFBP4P22692 258 aa22.73■■□□□ 1.23
GCN1-207ENST00000550471 SETQ01105 290 aaPredicted RBP22.73■■□□□ 1.23
GCN1-207ENST00000550471 HIC1Q14526 733 aa22.73■■□□□ 1.23
GCN1-207ENST00000550471 TRIM50Q86XT4 487 aa22.73■■□□□ 1.23
GCN1-207ENST00000550471 REXO1Q8N1G1 1221 aaKnown RBP22.73■■□□□ 1.23
GCN1-207ENST00000550471 WNT8BQ93098 351 aa22.73■■□□□ 1.23
GCN1-207ENST00000550471 ZSWIM6Q9HCJ5 1215 aa22.73■■□□□ 1.23
GCN1-207ENST00000550471 SH3GLB2Q9NR46 395 aa22.73■■□□□ 1.23
GCN1-207ENST00000550471 MYO9BQ13459 2157 aa22.72■■□□□ 1.23
GCN1-207ENST00000550471 CPLX2Q6PUV4 134 aaKnown RBP22.72■■□□□ 1.23
GCN1-207ENST00000550471 TRIM22Q8IYM9 498 aa22.72■■□□□ 1.23
GCN1-207ENST00000550471 ATXN2LQ8WWM7 1075 aaKnown RBP22.72■■□□□ 1.23
GCN1-207ENST00000550471 C22orf23Q9BZE7 217 aa22.72■■□□□ 1.23
GCN1-207ENST00000550471 PPP4R2Q9NY27 417 aa22.72■■□□□ 1.23
GCN1-207ENST00000550471 TCEAL9Q9UHQ7 104 aa22.72■■□□□ 1.23
GCN1-207ENST00000550471 INSL6Q9Y581 213 aa22.72■■□□□ 1.23
GCN1-207ENST00000550471 TET1Q8NFU7 2136 aa22.72■■□□□ 1.23
GCN1-207ENST00000550471 MBLAC1A4D2B0 266 aaPredicted RBP22.71■■□□□ 1.23
GCN1-207ENST00000550471 MYOGP15173 224 aa22.71■■□□□ 1.23
GCN1-207ENST00000550471 MBTPS1Q14703 1052 aa22.71■■□□□ 1.23
GCN1-207ENST00000550471 GRIK4Q16099 956 aa22.71■■□□□ 1.23
GCN1-207ENST00000550471 DBF4BQ8NFT6 615 aa22.71■■□□□ 1.23
GCN1-207ENST00000550471 ZNF274Q96GC6 653 aaPredicted RBP22.71■■□□□ 1.23
GCN1-207ENST00000550471 AGO4Q9HCK5 861 aaKnown RBP22.71■■□□□ 1.23
GCN1-207ENST00000550471 TBC1D22BQ9NU19 505 aa22.71■■□□□ 1.23
GCN1-207ENST00000550471 LMCD1Q9NZU5 365 aa22.71■■□□□ 1.23
GCN1-207ENST00000550471 TUBE1Q9UJT0 475 aa22.71■■□□□ 1.23
GCN1-207ENST00000550471 STAT5BP51692 787 aa22.7■■□□□ 1.22
GCN1-207ENST00000550471 TAP1Q03518 808 aa22.7■■□□□ 1.22
GCN1-207ENST00000550471 FAM160B1Q5W0V3 765 aa22.7■■□□□ 1.22
GCN1-207ENST00000550471 SQORQ9Y6N5 450 aa22.7■■□□□ 1.22
GCN1-207ENST00000550471 GBF1Q92538 1859 aa22.7■■□□□ 1.22
GCN1-207ENST00000550471 KAT6AQ92794 2004 aa22.7■■□□□ 1.22
GCN1-207ENST00000550471 ATG7O95352 703 aa22.69■■□□□ 1.22
GCN1-207ENST00000550471 CPA1P15085 419 aa22.69■■□□□ 1.22
GCN1-207ENST00000550471 PDIA3P30101 505 aaKnown RBP22.69■■□□□ 1.22
GCN1-207ENST00000550471 ACTR2P61160 394 aa22.69■■□□□ 1.22
GCN1-207ENST00000550471 ADGRE1Q14246 886 aa22.69■■□□□ 1.22
GCN1-207ENST00000550471 IER5Q5VY09 327 aa22.69■■□□□ 1.22
GCN1-207ENST00000550471 PLA2G4DQ86XP0 818 aa22.69■■□□□ 1.22
GCN1-207ENST00000550471 USP38Q8NB14 1042 aa22.69■■□□□ 1.22
GCN1-207ENST00000550471 SAMD11Q96NU1 681 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms