RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 TLDC2A0PJX2 215 aa11.81□□□□□ -0.52
SMARCC2-208ENST00000550150 MYMKA6NI61 221 aa11.81□□□□□ -0.52
SMARCC2-208ENST00000550150 HGSO14964 777 aaPredicted RBP11.81□□□□□ -0.52
SMARCC2-208ENST00000550150 PPP1R37O75864 691 aa11.81□□□□□ -0.52
SMARCC2-208ENST00000550150 KRT18P05783 430 aaKnown RBP11.81□□□□□ -0.52
SMARCC2-208ENST00000550150 KLHL30Q0D2K2 578 aa11.81□□□□□ -0.52
SMARCC2-208ENST00000550150 MAN2A1Q16706 1144 aa11.81□□□□□ -0.52
SMARCC2-208ENST00000550150 RCSD1Q6JBY9 416 aa11.81□□□□□ -0.52
SMARCC2-208ENST00000550150 MICALCLQ6ZW33 695 aa11.81□□□□□ -0.52
SMARCC2-208ENST00000550150 CCDC84Q86UT8 332 aaPredicted RBP11.81□□□□□ -0.52
SMARCC2-208ENST00000550150 NLRP14Q86W24 1093 aa11.81□□□□□ -0.52
SMARCC2-208ENST00000550150 CERS5Q8N5B7 392 aa11.81□□□□□ -0.52
SMARCC2-208ENST00000550150 UHMK1Q8TAS1 419 aaKnown RBP11.81□□□□□ -0.52
SMARCC2-208ENST00000550150 SH3GL2Q99962 352 aa11.81□□□□□ -0.52
SMARCC2-208ENST00000550150 DDX47Q9H0S4 455 aaKnown RBP11.81□□□□□ -0.52
SMARCC2-208ENST00000550150 GGA1Q9UJY5 639 aa11.81□□□□□ -0.52
SMARCC2-208ENST00000550150 ATF5Q9Y2D1 282 aaPredicted RBP11.81□□□□□ -0.52
SMARCC2-208ENST00000550150 LEMD3Q9Y2U8 911 aa11.81□□□□□ -0.52
SMARCC2-208ENST00000550150 IFFO1Q0D2I5 559 aa11.81□□□□□ -0.52
SMARCC2-208ENST00000550150 SP8Q8IXZ3 490 aa11.81□□□□□ -0.52
SMARCC2-208ENST00000550150 FAM212AQ96EL1 285 aa11.81□□□□□ -0.52
SMARCC2-208ENST00000550150 MASTLQ96GX5 879 aa11.81□□□□□ -0.52
SMARCC2-208ENST00000550150 ERGIC2Q96RQ1 377 aa11.81□□□□□ -0.52
SMARCC2-208ENST00000550150 TSG101Q99816 390 aa11.81□□□□□ -0.52
SMARCC2-208ENST00000550150 MTA3Q9BTC8 594 aa11.81□□□□□ -0.52
SMARCC2-208ENST00000550150 IL17RBQ9NRM6 502 aa11.81□□□□□ -0.52
SMARCC2-208ENST00000550150 C6orf229H3BNL8 230 aa11.8□□□□□ -0.52
SMARCC2-208ENST00000550150 GCOM1H8Y6P7 765 aaPredicted RBP11.8□□□□□ -0.52
SMARCC2-208ENST00000550150 MYZAPP0CAP1 466 aa11.8□□□□□ -0.52
SMARCC2-208ENST00000550150 KIRREL3Q8IZU9 778 aa11.8□□□□□ -0.52
SMARCC2-208ENST00000550150 PIAS4Q8N2W9 510 aaPredicted RBP11.8□□□□□ -0.52
SMARCC2-208ENST00000550150 COA7Q96BR5 231 aa11.8□□□□□ -0.52
SMARCC2-208ENST00000550150 SPAG5Q96R06 1193 aa11.8□□□□□ -0.52
SMARCC2-208ENST00000550150 CCDC113Q9H0I3 377 aa11.8□□□□□ -0.52
SMARCC2-208ENST00000550150 CXorf56Q9H5V9 222 aa11.8□□□□□ -0.52
SMARCC2-208ENST00000550150 PCDHAC2Q9Y5I4 1007 aa11.8□□□□□ -0.52
SMARCC2-208ENST00000550150 BRCA1P38398 1863 aaKnown RBP11.8□□□□□ -0.52
SMARCC2-208ENST00000550150 NEK8Q86SG6 692 aa11.8□□□□□ -0.52
SMARCC2-208ENST00000550150 LARP4BQ92615 738 aaKnown RBP11.8□□□□□ -0.52
SMARCC2-208ENST00000550150 PURBQ96QR8 312 aaKnown RBP11.8□□□□□ -0.52
SMARCC2-208ENST00000550150 NUDT12Q9BQG2 462 aa11.8□□□□□ -0.52
SMARCC2-208ENST00000550150 CCSER1Q9C0I3 900 aa11.8□□□□□ -0.52
SMARCC2-208ENST00000550150 EPN3Q9H201 632 aa11.8□□□□□ -0.52
SMARCC2-208ENST00000550150 A0A087X0T9 212 aa11.79□□□□□ -0.52
SMARCC2-208ENST00000550150 TDP2O95551 362 aa11.79□□□□□ -0.52
SMARCC2-208ENST00000550150 FAM228BP0C875 321 aa11.79□□□□□ -0.52
SMARCC2-208ENST00000550150 PDE6BP35913 854 aa11.79□□□□□ -0.52
SMARCC2-208ENST00000550150 R3HDM1Q15032 1099 aaKnown RBP11.79□□□□□ -0.52
SMARCC2-208ENST00000550150 CALCRLQ16602 461 aa11.79□□□□□ -0.52
SMARCC2-208ENST00000550150 FAM83BQ5T0W9 1011 aa11.79□□□□□ -0.52
SMARCC2-208ENST00000550150 CPLX4Q7Z7G2 160 aa11.79□□□□□ -0.52
SMARCC2-208ENST00000550150 MYCBPAPQ8TBZ2 947 aa11.79□□□□□ -0.52
SMARCC2-208ENST00000550150 DDX12PQ92771 950 aa11.79□□□□□ -0.52
SMARCC2-208ENST00000550150 PIGSQ96S52 555 aa11.79□□□□□ -0.52
SMARCC2-208ENST00000550150 SEPT11Q9NVA2 429 aaKnown RBP11.79□□□□□ -0.52
SMARCC2-208ENST00000550150 NOVA2Q9UNW9 492 aaKnown RBP11.79□□□□□ -0.52
SMARCC2-208ENST00000550150 RPSAP08865 295 aaKnown RBP11.79□□□□□ -0.52
SMARCC2-208ENST00000550150 ACTN1P12814 892 aa11.79□□□□□ -0.52
SMARCC2-208ENST00000550150 IL1R1P14778 569 aa11.79□□□□□ -0.52
SMARCC2-208ENST00000550150 PTGISQ16647 500 aa11.79□□□□□ -0.52
SMARCC2-208ENST00000550150 DCAF17Q5H9S7 520 aaPredicted RBP11.79□□□□□ -0.52
SMARCC2-208ENST00000550150 TMED8Q6PL24 325 aaPredicted RBP11.79□□□□□ -0.52
SMARCC2-208ENST00000550150 SUGP1Q8IWZ8 645 aaKnown RBP11.79□□□□□ -0.52
SMARCC2-208ENST00000550150 TBC1D31Q96DN5 1066 aa11.79□□□□□ -0.52
SMARCC2-208ENST00000550150 ATP6V1G3Q96LB4 118 aa11.79□□□□□ -0.52
SMARCC2-208ENST00000550150 C6orf50Q9HD87 102 aa11.79□□□□□ -0.52
SMARCC2-208ENST00000550150 LUC7LQ9NQ29 371 aaKnown RBP11.79□□□□□ -0.52
SMARCC2-208ENST00000550150 GEMIN8Q9NWZ8 242 aaKnown RBP11.79□□□□□ -0.52
SMARCC2-208ENST00000550150 SIK3Q9Y2K2 1263 aa11.79□□□□□ -0.52
SMARCC2-208ENST00000550150 STXBP3O00186 592 aa11.79□□□□□ -0.52
SMARCC2-208ENST00000550150 CPP00450 1065 aa11.79□□□□□ -0.52
SMARCC2-208ENST00000550150 MDH1P40925 334 aaKnown RBP11.79□□□□□ -0.52
SMARCC2-208ENST00000550150 RPS6KA1Q15418 735 aa11.79□□□□□ -0.52
SMARCC2-208ENST00000550150 C15orf52Q6ZUT6 534 aaKnown RBP11.79□□□□□ -0.52
SMARCC2-208ENST00000550150 DBNDD1Q9H9R9 158 aa11.79□□□□□ -0.52
SMARCC2-208ENST00000550150 MAD2L2Q9UI95 211 aa11.79□□□□□ -0.52
SMARCC2-208ENST00000550150 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.79□□□□□ -0.52
SMARCC2-208ENST00000550150 NPHP3-ACAD11A0A0J9YXS1 232 aa11.78□□□□□ -0.52
SMARCC2-208ENST00000550150 TNNC1P63316 161 aa11.78□□□□□ -0.52
SMARCC2-208ENST00000550150 KRT71Q3SY84 523 aa11.78□□□□□ -0.52
SMARCC2-208ENST00000550150 PDXDC1Q6P996 788 aa11.78□□□□□ -0.52
SMARCC2-208ENST00000550150 EP400NLQ6ZTU2 488 aa11.78□□□□□ -0.52
SMARCC2-208ENST00000550150 CCDC13Q8IYE1 715 aa11.78□□□□□ -0.52
SMARCC2-208ENST00000550150 TMEM47Q9BQJ4 181 aa11.78□□□□□ -0.52
SMARCC2-208ENST00000550150 BARHL2Q9NY43 387 aa11.78□□□□□ -0.52
SMARCC2-208ENST00000550150 AMACRQ9UHK6 382 aa11.78□□□□□ -0.52
SMARCC2-208ENST00000550150 PHF20L1A8MW92 1017 aa11.78□□□□□ -0.52
SMARCC2-208ENST00000550150 FGFR1OPO95684 399 aaKnown RBP11.78□□□□□ -0.52
SMARCC2-208ENST00000550150 COPB2P35606 906 aa11.78□□□□□ -0.52
SMARCC2-208ENST00000550150 TMEM266Q2M3C6 531 aa11.78□□□□□ -0.52
SMARCC2-208ENST00000550150 SLC35G1Q2M3R5 365 aa11.78□□□□□ -0.52
SMARCC2-208ENST00000550150 KRT79Q5XKE5 535 aa11.78□□□□□ -0.52
SMARCC2-208ENST00000550150 CLEC10AQ8IUN9 316 aa11.78□□□□□ -0.52
SMARCC2-208ENST00000550150 REXO1Q8N1G1 1221 aaKnown RBP11.78□□□□□ -0.52
SMARCC2-208ENST00000550150 SH3RF3Q8TEJ3 882 aaPredicted RBP11.78□□□□□ -0.52
SMARCC2-208ENST00000550150 UPF1Q92900 1129 aaKnown RBP eCLIP11.78□□□□□ -0.52
SMARCC2-208ENST00000550150 SELENOSQ9BQE4 189 aa11.78□□□□□ -0.52
SMARCC2-208ENST00000550150 CELF4Q9BZC1 486 aaKnown RBP11.78□□□□□ -0.52
SMARCC2-208ENST00000550150 ARPP21Q9UBL0 812 aaPredicted RBP11.78□□□□□ -0.52
SMARCC2-208ENST00000550150 C21orf2O43822 256 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms