RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 AP3B2Q13367 1082 aa11.94□□□□□ -0.5
CCDC38-207ENST00000549752 MTMR1Q13613 665 aa11.94□□□□□ -0.5
CCDC38-207ENST00000549752 LRRC8DQ7L1W4 858 aa11.94□□□□□ -0.5
CCDC38-207ENST00000549752 CYFIP1Q7L576 1253 aa11.94□□□□□ -0.5
CCDC38-207ENST00000549752 DEFB128Q7Z7B8 93 aa11.94□□□□□ -0.5
CCDC38-207ENST00000549752 PLPP6Q8IY26 295 aa11.94□□□□□ -0.5
CCDC38-207ENST00000549752 PHOSPHO2Q8TCD6 241 aa11.94□□□□□ -0.5
CCDC38-207ENST00000549752 TNPO1Q92973 898 aaKnown RBP11.94□□□□□ -0.5
CCDC38-207ENST00000549752 GUCD1Q96NT3 240 aa11.94□□□□□ -0.5
CCDC38-207ENST00000549752 SLC9A7Q96T83 725 aa11.94□□□□□ -0.5
CCDC38-207ENST00000549752 CDX2Q99626 313 aaPredicted RBP11.94□□□□□ -0.5
CCDC38-207ENST00000549752 C16orf70Q9BSU1 422 aa11.94□□□□□ -0.5
CCDC38-207ENST00000549752 ZNF576Q9H609 170 aa11.94□□□□□ -0.5
CCDC38-207ENST00000549752 BARHL2Q9NY43 387 aa11.94□□□□□ -0.5
CCDC38-207ENST00000549752 PCDHA6Q9UN73 950 aa11.94□□□□□ -0.5
CCDC38-207ENST00000549752 PCDHA8Q9Y5H6 950 aa11.94□□□□□ -0.5
CCDC38-207ENST00000549752 V9GY48 417 aaPredicted RBP11.94□□□□□ -0.5
CCDC38-207ENST00000549752 NID2Q14112 1375 aa11.93□□□□□ -0.5
CCDC38-207ENST00000549752 EMSYQ7Z589 1322 aa11.93□□□□□ -0.5
CCDC38-207ENST00000549752 TRANK1O15050 2925 aa11.93□□□□□ -0.5
CCDC38-207ENST00000549752 hCG_1642624A0A1W2PR95 340 aa11.93□□□□□ -0.5
CCDC38-207ENST00000549752 C17orf102A2RUQ5 167 aa11.93□□□□□ -0.5
CCDC38-207ENST00000549752 KIF28PB7ZC32 967 aa11.93□□□□□ -0.5
CCDC38-207ENST00000549752 GALR2O43603 387 aaPredicted RBP11.93□□□□□ -0.5
CCDC38-207ENST00000549752 SORBS3O60504 671 aa11.93□□□□□ -0.5
CCDC38-207ENST00000549752 EFCAB14O75071 495 aa11.93□□□□□ -0.5
CCDC38-207ENST00000549752 CAND2O75155 1236 aa11.93□□□□□ -0.5
CCDC38-207ENST00000549752 CENPBP07199 599 aaPredicted RBP11.93□□□□□ -0.5
CCDC38-207ENST00000549752 ATP2A2P16615 1042 aaKnown RBP11.93□□□□□ -0.5
CCDC38-207ENST00000549752 RPS6KB1P23443 525 aa11.93□□□□□ -0.5
CCDC38-207ENST00000549752 KCNJ6P48051 423 aa11.93□□□□□ -0.5
CCDC38-207ENST00000549752 COL9A3Q14050 684 aaPredicted RBP11.93□□□□□ -0.5
CCDC38-207ENST00000549752 WWC2Q6AWC2 1192 aa11.93□□□□□ -0.5
CCDC38-207ENST00000549752 GPKOWQ92917 476 aaPredicted RBP eCLIP11.93□□□□□ -0.5
CCDC38-207ENST00000549752 BRF1Q92994 677 aa11.93□□□□□ -0.5
CCDC38-207ENST00000549752 GAS2L1Q99501 681 aaPredicted RBP11.93□□□□□ -0.5
CCDC38-207ENST00000549752 GPR20Q99678 358 aa11.93□□□□□ -0.5
CCDC38-207ENST00000549752 PBX4Q9BYU1 374 aa11.93□□□□□ -0.5
CCDC38-207ENST00000549752 TTYH1Q9H313 450 aaPredicted RBP11.93□□□□□ -0.5
CCDC38-207ENST00000549752 SLC28A3Q9HAS3 691 aa11.93□□□□□ -0.5
CCDC38-207ENST00000549752 PCDHA11Q9Y5I1 949 aa11.93□□□□□ -0.5
CCDC38-207ENST00000549752 CHD9Q3L8U1 2897 aa11.93□□□□□ -0.5
CCDC38-207ENST00000549752 A0A0C4DFX4 3053 aa11.92□□□□□ -0.5
CCDC38-207ENST00000549752 SMCO2A6NFE2 343 aa11.92□□□□□ -0.5
CCDC38-207ENST00000549752 RPLP2P05387 115 aaKnown RBP11.92□□□□□ -0.5
CCDC38-207ENST00000549752 CKBP12277 381 aa11.92□□□□□ -0.5
CCDC38-207ENST00000549752 SCG2P13521 617 aa11.92□□□□□ -0.5
CCDC38-207ENST00000549752 FOSL2P15408 326 aa11.92□□□□□ -0.5
CCDC38-207ENST00000549752 GNA11P29992 359 aa11.92□□□□□ -0.5
CCDC38-207ENST00000549752 APOBRQ0VD83 1088 aa11.92□□□□□ -0.5
CCDC38-207ENST00000549752 FUT2Q10981 343 aa11.92□□□□□ -0.5
CCDC38-207ENST00000549752 SEMA3FQ13275 785 aa11.92□□□□□ -0.5
CCDC38-207ENST00000549752 UBE2SQ16763 222 aa11.92□□□□□ -0.5
CCDC38-207ENST00000549752 PFKFB3Q16875 520 aaPredicted RBP11.92□□□□□ -0.5
CCDC38-207ENST00000549752 PDCD7Q8N8D1 485 aaKnown RBP11.92□□□□□ -0.5
CCDC38-207ENST00000549752 BICD2Q8TD16 824 aa11.92□□□□□ -0.5
CCDC38-207ENST00000549752 SEPT1Q8WYJ6 367 aa11.92□□□□□ -0.5
CCDC38-207ENST00000549752 ATP6V0A1Q93050 837 aa11.92□□□□□ -0.5
CCDC38-207ENST00000549752 AGXT2Q9BYV1 514 aa11.92□□□□□ -0.5
CCDC38-207ENST00000549752 C6orf50Q9HD87 102 aa11.92□□□□□ -0.5
CCDC38-207ENST00000549752 JADE2Q9NQC1 790 aa11.92□□□□□ -0.5
CCDC38-207ENST00000549752 CXXC1Q9P0U4 656 aaPredicted RBP11.92□□□□□ -0.5
CCDC38-207ENST00000549752 UBIAD1Q9Y5Z9 338 aa11.92□□□□□ -0.5
CCDC38-207ENST00000549752 CYP46A1Q9Y6A2 500 aa11.92□□□□□ -0.5
CCDC38-207ENST00000549752 SIP14410 1827 aa11.92□□□□□ -0.5
CCDC38-207ENST00000549752 NLRC5Q86WI3 1866 aa11.91□□□□□ -0.5
CCDC38-207ENST00000549752 ESYT2A0FGR8 921 aa11.91□□□□□ -0.5
CCDC38-207ENST00000549752 GRXCR1A8MXD5 290 aa11.91□□□□□ -0.5
CCDC38-207ENST00000549752 STXBP3O00186 592 aa11.91□□□□□ -0.5
CCDC38-207ENST00000549752 ITGB5P18084 799 aa11.91□□□□□ -0.5
CCDC38-207ENST00000549752 CDC27P30260 824 aa11.91□□□□□ -0.5
CCDC38-207ENST00000549752 ZNF76P36508 570 aa11.91□□□□□ -0.5
CCDC38-207ENST00000549752 CNKSR3Q6P9H4 555 aa11.91□□□□□ -0.5
CCDC38-207ENST00000549752 CPLX2Q6PUV4 134 aaKnown RBP11.91□□□□□ -0.5
CCDC38-207ENST00000549752 RUFY3Q7L099 469 aa11.91□□□□□ -0.5
CCDC38-207ENST00000549752 SERINC5Q86VE9 423 aa11.91□□□□□ -0.5
CCDC38-207ENST00000549752 CCDC148Q8NFR7 591 aa11.91□□□□□ -0.5
CCDC38-207ENST00000549752 PPP1R13LQ8WUF5 828 aa11.91□□□□□ -0.5
CCDC38-207ENST00000549752 MXRA8Q9BRK3 442 aa11.91□□□□□ -0.5
CCDC38-207ENST00000549752 SDF4Q9BRK5 362 aa11.91□□□□□ -0.5
CCDC38-207ENST00000549752 TMEM121BQ9BXQ6 578 aaPredicted RBP11.91□□□□□ -0.5
CCDC38-207ENST00000549752 RNF26Q9BY78 433 aaPredicted RBP11.91□□□□□ -0.5
CCDC38-207ENST00000549752 ANO3Q9BYT9 981 aa11.91□□□□□ -0.5
CCDC38-207ENST00000549752 TM6SF1Q9BZW5 370 aa11.91□□□□□ -0.5
CCDC38-207ENST00000549752 SMARCAD1Q9H4L7 1026 aa11.91□□□□□ -0.5
CCDC38-207ENST00000549752 ERAP1Q9NZ08 941 aa11.91□□□□□ -0.5
CCDC38-207ENST00000549752 CDH23Q9H251 3354 aa11.91□□□□□ -0.5
CCDC38-207ENST00000549752 NRCAMQ92823 1304 aa11.9□□□□□ -0.5
CCDC38-207ENST00000549752 ABHD14A-ACY1A0A1B0GW23 586 aa11.9□□□□□ -0.5
CCDC38-207ENST00000549752 PRPF3O43395 683 aaKnown RBP11.9□□□□□ -0.5
CCDC38-207ENST00000549752 CXCL10P02778 98 aa11.9□□□□□ -0.5
CCDC38-207ENST00000549752 SMIM10L2AP0DMW4 78 aa11.9□□□□□ -0.5
CCDC38-207ENST00000549752 SMIM10L2BP0DMW5 78 aa11.9□□□□□ -0.5
CCDC38-207ENST00000549752 KCNA2P16389 499 aa11.9□□□□□ -0.5
CCDC38-207ENST00000549752 ADD1P35611 737 aaKnown RBP11.9□□□□□ -0.5
CCDC38-207ENST00000549752 TCF7P36402 384 aaPredicted RBP11.9□□□□□ -0.5
CCDC38-207ENST00000549752 SREBF1P36956 1147 aa11.9□□□□□ -0.5
CCDC38-207ENST00000549752 SP4Q02446 784 aa11.9□□□□□ -0.5
CCDC38-207ENST00000549752 IKBKEQ14164 716 aa11.9□□□□□ -0.5
CCDC38-207ENST00000549752 CEP55Q53EZ4 464 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms