RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 FBXL6Q8N531 539 aa11.55□□□□□ -0.56
PRIM1-204ENST00000549549 SCARF2Q96GP6 870 aaPredicted RBP11.55□□□□□ -0.56
PRIM1-204ENST00000549549 TEKT5Q96M29 485 aa11.55□□□□□ -0.56
PRIM1-204ENST00000549549 MS4A5Q9H3V2 200 aa11.55□□□□□ -0.56
PRIM1-204ENST00000549549 USP25Q9UHP3 1055 aa11.55□□□□□ -0.56
PRIM1-204ENST00000549549 SRPK3Q9UPE1 567 aa11.55□□□□□ -0.56
PRIM1-204ENST00000549549 SNX11Q9Y5W9 270 aa11.55□□□□□ -0.56
PRIM1-204ENST00000549549 XPOTO43592 962 aaKnown RBP11.54□□□□□ -0.56
PRIM1-204ENST00000549549 CLASP2O75122 1294 aaKnown RBP11.54□□□□□ -0.56
PRIM1-204ENST00000549549 GALEQ14376 348 aa11.54□□□□□ -0.56
PRIM1-204ENST00000549549 IFI16Q16666 785 aaKnown RBP11.54□□□□□ -0.56
PRIM1-204ENST00000549549 ARHGAP29Q52LW3 1261 aa11.54□□□□□ -0.56
PRIM1-204ENST00000549549 FIGNQ5HY92 759 aa11.54□□□□□ -0.56
PRIM1-204ENST00000549549 WAPLQ7Z5K2 1190 aa11.54□□□□□ -0.56
PRIM1-204ENST00000549549 CREG2Q8IUH2 290 aa11.54□□□□□ -0.56
PRIM1-204ENST00000549549 ZZZ3Q8IYH5 903 aa11.54□□□□□ -0.56
PRIM1-204ENST00000549549 PLEKHO2Q8TD55 490 aa11.54□□□□□ -0.56
PRIM1-204ENST00000549549 PCIF1Q9H4Z3 704 aa11.54□□□□□ -0.56
PRIM1-204ENST00000549549 DDX21Q9NR30 783 aaKnown RBP eCLIP11.54□□□□□ -0.56
PRIM1-204ENST00000549549 CCM2LQ9NUG4 571 aaPredicted RBP11.54□□□□□ -0.56
PRIM1-204ENST00000549549 INVSQ9Y283 1065 aa11.54□□□□□ -0.56
PRIM1-204ENST00000549549 KCNK3O14649 394 aa11.53□□□□□ -0.56
PRIM1-204ENST00000549549 HSPA6P17066 643 aa11.53□□□□□ -0.56
PRIM1-204ENST00000549549 FPR2P25090 351 aa11.53□□□□□ -0.56
PRIM1-204ENST00000549549 RPL10P27635 214 aaKnown RBP11.53□□□□□ -0.56
PRIM1-204ENST00000549549 EGR3Q06889 387 aa11.53□□□□□ -0.56
PRIM1-204ENST00000549549 SAFB2Q14151 953 aaKnown RBP eCLIP11.53□□□□□ -0.56
PRIM1-204ENST00000549549 C4orf46Q504U0 113 aa11.53□□□□□ -0.56
PRIM1-204ENST00000549549 RIOX2Q8IUF8 465 aa11.53□□□□□ -0.56
PRIM1-204ENST00000549549 TEX2Q8IWB9 1127 aa11.53□□□□□ -0.56
PRIM1-204ENST00000549549 SLC35G2Q8TBE7 412 aa11.53□□□□□ -0.56
PRIM1-204ENST00000549549 SSH1Q8WYL5 1049 aa11.53□□□□□ -0.56
PRIM1-204ENST00000549549 ACAP3Q96P50 834 aa11.53□□□□□ -0.56
PRIM1-204ENST00000549549 ARPC5LQ9BPX5 153 aa11.53□□□□□ -0.56
PRIM1-204ENST00000549549 SLC6A20Q9NP91 592 aa11.53□□□□□ -0.56
PRIM1-204ENST00000549549 BTG4Q9NY30 223 aa11.53□□□□□ -0.56
PRIM1-204ENST00000549549 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.53□□□□□ -0.56
PRIM1-204ENST00000549549 C22orf46C9J442 243 aa11.52□□□□□ -0.57
PRIM1-204ENST00000549549 KDM1AO60341 852 aa11.52□□□□□ -0.57
PRIM1-204ENST00000549549 HIP1RO75146 1068 aa11.52□□□□□ -0.57
PRIM1-204ENST00000549549 CD40P25942 277 aa11.52□□□□□ -0.57
PRIM1-204ENST00000549549 PTX3P26022 381 aaPredicted RBP11.52□□□□□ -0.57
PRIM1-204ENST00000549549 ESRP1Q6NXG1 681 aaKnown RBP11.52□□□□□ -0.57
PRIM1-204ENST00000549549 NLGN4XQ8N0W4 816 aa11.52□□□□□ -0.57
PRIM1-204ENST00000549549 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.52□□□□□ -0.57
PRIM1-204ENST00000549549 JADE3Q92613 823 aa11.52□□□□□ -0.57
PRIM1-204ENST00000549549 TTC17Q96AE7 1141 aa11.52□□□□□ -0.57
PRIM1-204ENST00000549549 MTA3Q9BTC8 594 aa11.52□□□□□ -0.57
PRIM1-204ENST00000549549 METTL22Q9BUU2 404 aaPredicted RBP11.52□□□□□ -0.57
PRIM1-204ENST00000549549 SLC12A5Q9H2X9 1139 aa11.52□□□□□ -0.57
PRIM1-204ENST00000549549 NMRK2Q9NPI5 230 aa11.52□□□□□ -0.57
PRIM1-204ENST00000549549 MAN1C1Q9NR34 630 aa11.52□□□□□ -0.57
PRIM1-204ENST00000549549 MARCH2Q9P0N8 246 aa11.52□□□□□ -0.57
PRIM1-204ENST00000549549 TNFRSF10DQ9UBN6 386 aa11.52□□□□□ -0.57
PRIM1-204ENST00000549549 GULP1Q9UBP9 304 aa11.52□□□□□ -0.57
PRIM1-204ENST00000549549 DDX20Q9UHI6 824 aaKnown RBP11.52□□□□□ -0.57
PRIM1-204ENST00000549549 FRMPD2Q68DX3 1309 aaPredicted RBP11.52□□□□□ -0.57
PRIM1-204ENST00000549549 PITPNM2Q9BZ72 1349 aa11.52□□□□□ -0.57
PRIM1-204ENST00000549549 DGKIO75912 1065 aa11.51□□□□□ -0.57
PRIM1-204ENST00000549549 NBPF7P0C2Y1 421 aaPredicted RBP11.51□□□□□ -0.57
PRIM1-204ENST00000549549 PICALMQ13492 652 aa11.51□□□□□ -0.57
PRIM1-204ENST00000549549 MOGSQ13724 837 aa11.51□□□□□ -0.57
PRIM1-204ENST00000549549 IL31Q6EBC2 164 aa11.51□□□□□ -0.57
PRIM1-204ENST00000549549 UHMK1Q8TAS1 419 aaKnown RBP11.51□□□□□ -0.57
PRIM1-204ENST00000549549 PIP4K2CQ8TBX8 421 aa11.51□□□□□ -0.57
PRIM1-204ENST00000549549 LRGUKQ96M69 825 aa11.51□□□□□ -0.57
PRIM1-204ENST00000549549 SP110Q9HB58 689 aa11.51□□□□□ -0.57
PRIM1-204ENST00000549549 ZNF277Q9NRM2 450 aaPredicted RBP11.51□□□□□ -0.57
PRIM1-204ENST00000549549 C1orf112Q9NSG2 853 aa11.51□□□□□ -0.57
PRIM1-204ENST00000549549 DSEQ9UL01 958 aa11.51□□□□□ -0.57
PRIM1-204ENST00000549549 LCHNA4D1U4 455 aa11.5□□□□□ -0.57
PRIM1-204ENST00000549549 WIPF1O43516 503 aa11.5□□□□□ -0.57
PRIM1-204ENST00000549549 SEC23AQ15436 765 aa11.5□□□□□ -0.57
PRIM1-204ENST00000549549 CPSF6Q16630 551 aaKnown RBP eCLIP11.5□□□□□ -0.57
PRIM1-204ENST00000549549 MROH9Q5TGP6 573 aa11.5□□□□□ -0.57
PRIM1-204ENST00000549549 CHST15Q7LFX5 561 aaPredicted RBP11.5□□□□□ -0.57
PRIM1-204ENST00000549549 ZNF775Q96BV0 537 aaPredicted RBP11.5□□□□□ -0.57
PRIM1-204ENST00000549549 C16orf92Q96LL3 132 aa11.5□□□□□ -0.57
PRIM1-204ENST00000549549 USP36Q9P275 1121 aaKnown RBP11.5□□□□□ -0.57
PRIM1-204ENST00000549549 COA3Q9Y2R0 106 aaPredicted RBP11.5□□□□□ -0.57
PRIM1-204ENST00000549549 PTPN22Q9Y2R2 807 aa11.5□□□□□ -0.57
PRIM1-204ENST00000549549 FADS2P1A8MWK0 482 aa11.49□□□□□ -0.57
PRIM1-204ENST00000549549 SCDO00767 359 aa11.49□□□□□ -0.57
PRIM1-204ENST00000549549 IFIT2P09913 472 aaKnown RBP11.49□□□□□ -0.57
PRIM1-204ENST00000549549 HTR3AP46098 478 aa11.49□□□□□ -0.57
PRIM1-204ENST00000549549 DHX8Q14562 1220 aaKnown RBP11.49□□□□□ -0.57
PRIM1-204ENST00000549549 ACAP2Q15057 778 aa11.49□□□□□ -0.57
PRIM1-204ENST00000549549 SAFBQ15424 915 aaKnown RBP eCLIP11.49□□□□□ -0.57
PRIM1-204ENST00000549549 CLUL1Q15846 466 aa11.49□□□□□ -0.57
PRIM1-204ENST00000549549 COBLL1Q53SF7 1204 aa11.49□□□□□ -0.57
PRIM1-204ENST00000549549 CPZQ66K79 652 aa11.49□□□□□ -0.57
PRIM1-204ENST00000549549 PRR23CQ6ZRP0 262 aa11.49□□□□□ -0.57
PRIM1-204ENST00000549549 FAM43AQ8N2R8 423 aa11.49□□□□□ -0.57
PRIM1-204ENST00000549549 ZNF496Q96IT1 587 aaPredicted RBP11.49□□□□□ -0.57
PRIM1-204ENST00000549549 TAAR9Q96RI9 348 aa11.49□□□□□ -0.57
PRIM1-204ENST00000549549 G6PC3Q9BUM1 346 aa11.49□□□□□ -0.57
PRIM1-204ENST00000549549 ATP13A1Q9HD20 1204 aa11.49□□□□□ -0.57
PRIM1-204ENST00000549549 KCNH7Q9NS40 1196 aa11.49□□□□□ -0.57
PRIM1-204ENST00000549549 TMEM265A0A087WTH1 108 aa11.48□□□□□ -0.57
PRIM1-204ENST00000549549 AGXTP21549 392 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms