RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 VPS37CA5D8V6 355 aaPredicted RBP10.86□□□□□ -0.67
RAB5B-205ENST00000549034 SLC37A4O43826 429 aa10.86□□□□□ -0.67
RAB5B-205ENST00000549034 ZNF286BP0CG31 522 aa10.86□□□□□ -0.67
RAB5B-205ENST00000549034 MCM7P33993 719 aa10.86□□□□□ -0.67
RAB5B-205ENST00000549034 TCF7P36402 384 aaPredicted RBP10.86□□□□□ -0.67
RAB5B-205ENST00000549034 PSEN2P49810 448 aa10.86□□□□□ -0.67
RAB5B-205ENST00000549034 CDK7P50613 346 aa10.86□□□□□ -0.67
RAB5B-205ENST00000549034 ACTR2P61160 394 aa10.86□□□□□ -0.67
RAB5B-205ENST00000549034 BECN1Q14457 450 aa10.86□□□□□ -0.67
RAB5B-205ENST00000549034 TRIM60Q495X7 471 aa10.86□□□□□ -0.67
RAB5B-205ENST00000549034 FAM47CQ5HY64 1035 aa10.86□□□□□ -0.67
RAB5B-205ENST00000549034 LRCH2Q5VUJ6 765 aa10.86□□□□□ -0.67
RAB5B-205ENST00000549034 C7orf61Q8IZ16 206 aa10.86□□□□□ -0.67
RAB5B-205ENST00000549034 KAT2BQ92831 832 aa10.86□□□□□ -0.67
RAB5B-205ENST00000549034 GLG1Q92896 1179 aa10.86□□□□□ -0.67
RAB5B-205ENST00000549034 SLC5A5Q92911 643 aa10.86□□□□□ -0.67
RAB5B-205ENST00000549034 MBOAT7Q96N66 472 aa10.86□□□□□ -0.67
RAB5B-205ENST00000549034 RIT2Q99578 217 aa10.86□□□□□ -0.67
RAB5B-205ENST00000549034 C16orf70Q9BSU1 422 aa10.86□□□□□ -0.67
RAB5B-205ENST00000549034 SAMM50Q9Y512 469 aa10.86□□□□□ -0.67
RAB5B-205ENST00000549034 NR2E3Q9Y5X4 410 aa10.86□□□□□ -0.67
RAB5B-205ENST00000549034 GRIN2DO15399 1336 aa10.85□□□□□ -0.67
RAB5B-205ENST00000549034 DCDC2CA8MYV0 355 aa10.85□□□□□ -0.67
RAB5B-205ENST00000549034 H3BRB1 525 aa10.85□□□□□ -0.67
RAB5B-205ENST00000549034 TLR3O15455 904 aaKnown RBP10.85□□□□□ -0.67
RAB5B-205ENST00000549034 PQBP1O60828 265 aaKnown RBP10.85□□□□□ -0.67
RAB5B-205ENST00000549034 GAS7O60861 476 aa10.85□□□□□ -0.67
RAB5B-205ENST00000549034 ATG7O95352 703 aa10.85□□□□□ -0.67
RAB5B-205ENST00000549034 LGALS2P05162 132 aa10.85□□□□□ -0.67
RAB5B-205ENST00000549034 SYT1P21579 422 aa10.85□□□□□ -0.67
RAB5B-205ENST00000549034 STAT5BP51692 787 aa10.85□□□□□ -0.67
RAB5B-205ENST00000549034 TLE2Q04725 743 aa10.85□□□□□ -0.67
RAB5B-205ENST00000549034 MFSD10Q14728 455 aa10.85□□□□□ -0.67
RAB5B-205ENST00000549034 KIAA0753Q2KHM9 967 aa10.85□□□□□ -0.67
RAB5B-205ENST00000549034 C1orf53Q5VUE5 145 aa10.85□□□□□ -0.67
RAB5B-205ENST00000549034 SWSAP1Q6NVH7 229 aa10.85□□□□□ -0.67
RAB5B-205ENST00000549034 MIS18BP1Q6P0N0 1132 aa10.85□□□□□ -0.67
RAB5B-205ENST00000549034 C7orf31Q8N865 590 aa10.85□□□□□ -0.67
RAB5B-205ENST00000549034 FAM20AQ96MK3 541 aa10.85□□□□□ -0.67
RAB5B-205ENST00000549034 KATNAL1Q9BW62 490 aa10.85□□□□□ -0.67
RAB5B-205ENST00000549034 SEZ6LQ9BYH1 1024 aa10.85□□□□□ -0.67
RAB5B-205ENST00000549034 SMARCAD1Q9H4L7 1026 aa10.85□□□□□ -0.67
RAB5B-205ENST00000549034 TUT1Q9H6E5 874 aaKnown RBP10.85□□□□□ -0.67
RAB5B-205ENST00000549034 AZI2Q9H6S1 392 aa10.85□□□□□ -0.67
RAB5B-205ENST00000549034 MYH9P35579 1960 aaKnown RBP10.85□□□□□ -0.67
RAB5B-205ENST00000549034 WNT7AO00755 349 aa10.84□□□□□ -0.67
RAB5B-205ENST00000549034 BACH1O14867 736 aa10.84□□□□□ -0.67
RAB5B-205ENST00000549034 TBX3O15119 743 aa10.84□□□□□ -0.67
RAB5B-205ENST00000549034 CHMP2AO43633 222 aa10.84□□□□□ -0.67
RAB5B-205ENST00000549034 PSMD10O75832 226 aa10.84□□□□□ -0.67
RAB5B-205ENST00000549034 CCNE2O96020 404 aa10.84□□□□□ -0.67
RAB5B-205ENST00000549034 PSAPP07602 524 aa10.84□□□□□ -0.67
RAB5B-205ENST00000549034 HOXD8P13378 290 aaPredicted RBP10.84□□□□□ -0.67
RAB5B-205ENST00000549034 MARK3P27448 753 aa10.84□□□□□ -0.67
RAB5B-205ENST00000549034 TXKP42681 527 aa10.84□□□□□ -0.67
RAB5B-205ENST00000549034 TOB1P50616 345 aaPredicted RBP10.84□□□□□ -0.67
RAB5B-205ENST00000549034 NUBP1P53384 320 aa10.84□□□□□ -0.67
RAB5B-205ENST00000549034 KRT76Q01546 638 aa10.84□□□□□ -0.67
RAB5B-205ENST00000549034 NBR1Q14596 966 aa10.84□□□□□ -0.67
RAB5B-205ENST00000549034 SNX17Q15036 470 aa10.84□□□□□ -0.67
RAB5B-205ENST00000549034 CALCRLQ16602 461 aa10.84□□□□□ -0.67
RAB5B-205ENST00000549034 TTC38Q5R3I4 469 aa10.84□□□□□ -0.67
RAB5B-205ENST00000549034 ZNF746Q6NUN9 644 aaPredicted RBP10.84□□□□□ -0.67
RAB5B-205ENST00000549034 NFRKBQ6P4R8 1299 aa10.84□□□□□ -0.67
RAB5B-205ENST00000549034 ABHD15Q6UXT9 468 aa10.84□□□□□ -0.67
RAB5B-205ENST00000549034 FERMT3Q86UX7 667 aa10.84□□□□□ -0.67
RAB5B-205ENST00000549034 SLFN12Q8IYM2 578 aa10.84□□□□□ -0.67
RAB5B-205ENST00000549034 SLC43A3Q8NBI5 491 aa10.84□□□□□ -0.67
RAB5B-205ENST00000549034 ETNPPLQ8TBG4 499 aa10.84□□□□□ -0.67
RAB5B-205ENST00000549034 HAS1Q92839 578 aa10.84□□□□□ -0.67
RAB5B-205ENST00000549034 UNC45AQ9H3U1 944 aa10.84□□□□□ -0.67
RAB5B-205ENST00000549034 RNPEPQ9H4A4 650 aa10.84□□□□□ -0.67
RAB5B-205ENST00000549034 PRDM5Q9NQX1 630 aaPredicted RBP10.84□□□□□ -0.67
RAB5B-205ENST00000549034 TMEM39AQ9NV64 488 aa10.84□□□□□ -0.67
RAB5B-205ENST00000549034 HDAC6Q9UBN7 1215 aa10.84□□□□□ -0.67
RAB5B-205ENST00000549034 PRKAG2Q9UGJ0 569 aa10.84□□□□□ -0.67
RAB5B-205ENST00000549034 ZNF215Q9UL58 517 aaPredicted RBP10.84□□□□□ -0.67
RAB5B-205ENST00000549034 PCDHA12Q9UN75 941 aa10.84□□□□□ -0.67
RAB5B-205ENST00000549034 PCDHA10Q9Y5I2 948 aa10.84□□□□□ -0.67
RAB5B-205ENST00000549034 MROH7Q68CQ1 1323 aa10.84□□□□□ -0.67
RAB5B-205ENST00000549034 TRIP12Q14669 1992 aaPredicted RBP10.83□□□□□ -0.68
RAB5B-205ENST00000549034 HAS3O00219 553 aa10.83□□□□□ -0.68
RAB5B-205ENST00000549034 STX6O43752 255 aa10.83□□□□□ -0.68
RAB5B-205ENST00000549034 NEMFO60524 1076 aa10.83□□□□□ -0.68
RAB5B-205ENST00000549034 LGR5O75473 907 aa10.83□□□□□ -0.68
RAB5B-205ENST00000549034 SUPT20HL2P0C7V6 817 aa10.83□□□□□ -0.68
RAB5B-205ENST00000549034 SYN1P17600 705 aa10.83□□□□□ -0.68
RAB5B-205ENST00000549034 TRAPPC10P48553 1259 aa10.83□□□□□ -0.68
RAB5B-205ENST00000549034 PTPN11Q06124 597 aaPredicted RBP10.83□□□□□ -0.68
RAB5B-205ENST00000549034 FAAP100Q0VG06 881 aa10.83□□□□□ -0.68
RAB5B-205ENST00000549034 RILPL1Q5EBL4 403 aa10.83□□□□□ -0.68
RAB5B-205ENST00000549034 FAM160B1Q5W0V3 765 aa10.83□□□□□ -0.68
RAB5B-205ENST00000549034 PLPPR4Q7Z2D5 763 aa10.83□□□□□ -0.68
RAB5B-205ENST00000549034 TRMT1LQ7Z2T5 733 aaKnown RBP10.83□□□□□ -0.68
RAB5B-205ENST00000549034 ANKRD33Q7Z3H0 272 aa10.83□□□□□ -0.68
RAB5B-205ENST00000549034 MIER3Q7Z3K6 550 aa10.83□□□□□ -0.68
RAB5B-205ENST00000549034 TRIM50Q86XT4 487 aa10.83□□□□□ -0.68
RAB5B-205ENST00000549034 CKAP2LQ8IYA6 745 aa10.83□□□□□ -0.68
RAB5B-205ENST00000549034 SMAP1Q8IYB5 467 aaPredicted RBP10.83□□□□□ -0.68
RAB5B-205ENST00000549034 TOX2Q96NM4 488 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms