RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 BIN2Q9UBW5 565 aaPredicted RBP15.08■□□□□ 0
HDAC7-228ENST00000548938 ADAMTS1Q9UHI8 967 aa15.08■□□□□ 0
HDAC7-228ENST00000548938 KCNK3O14649 394 aa15.08■□□□□ 0
HDAC7-228ENST00000548938 TRIM37O94972 964 aa15.08■□□□□ 0
HDAC7-228ENST00000548938 SPRED3Q2MJR0 410 aa15.08■□□□□ 0
HDAC7-228ENST00000548938 PPP4R3AQ6IN85 833 aa15.08■□□□□ 0
HDAC7-228ENST00000548938 ZKSCAN4Q969J2 545 aaPredicted RBP15.08■□□□□ 0
HDAC7-228ENST00000548938 ISCUQ9H1K1 167 aa15.08■□□□□ 0
HDAC7-228ENST00000548938 C6orf50Q9HD87 102 aa15.08■□□□□ 0
HDAC7-228ENST00000548938 LUC7LQ9NQ29 371 aaKnown RBP15.08■□□□□ 0
HDAC7-228ENST00000548938 KLC4Q9NSK0 619 aa15.08■□□□□ 0
HDAC7-228ENST00000548938 TMEM59LQ9UK28 342 aa15.08■□□□□ 0
HDAC7-228ENST00000548938 COL4A3BPQ9Y5P4 624 aa15.08■□□□□ 0
HDAC7-228ENST00000548938 GCOM1H8Y6P7 765 aaPredicted RBP15.07■□□□□ 0
HDAC7-228ENST00000548938 SLC37A4O43826 429 aa15.07■□□□□ 0
HDAC7-228ENST00000548938 MYZAPP0CAP1 466 aa15.07■□□□□ 0
HDAC7-228ENST00000548938 SMTNP53814 917 aa15.07■□□□□ 0
HDAC7-228ENST00000548938 FAM133AQ8N9E0 248 aa15.07■□□□□ 0
HDAC7-228ENST00000548938 SYN2Q92777 582 aaPredicted RBP15.07■□□□□ 0
HDAC7-228ENST00000548938 A1CFQ9NQ94 594 aaKnown RBP15.07■□□□□ 0
HDAC7-228ENST00000548938 SLC12A6Q9UHW9 1150 aa15.07■□□□□ 0
HDAC7-228ENST00000548938 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.07■□□□□ 0
HDAC7-228ENST00000548938 H0YGN5 161 aa15.07■□□□□ 0
HDAC7-228ENST00000548938 TRAF5O00463 557 aa15.07■□□□□ 0
HDAC7-228ENST00000548938 BACH1O14867 736 aa15.07■□□□□ 0
HDAC7-228ENST00000548938 RASSF9O75901 435 aa15.07■□□□□ 0
HDAC7-228ENST00000548938 ZNF844Q08AG5 666 aa15.07■□□□□ 0
HDAC7-228ENST00000548938 CALCRLQ16602 461 aa15.07■□□□□ 0
HDAC7-228ENST00000548938 ZCWPW2Q504Y3 356 aa15.07■□□□□ 0
HDAC7-228ENST00000548938 RAD54LQ92698 747 aa15.07■□□□□ 0
HDAC7-228ENST00000548938 MTMR9Q96QG7 549 aa15.07■□□□□ 0
HDAC7-228ENST00000548938 NEUROG2Q9H2A3 272 aa15.07■□□□□ 0
HDAC7-228ENST00000548938 SLC40A1Q9NP59 571 aa15.07■□□□□ 0
HDAC7-228ENST00000548938 NFS1Q9Y697 457 aa15.07■□□□□ 0
HDAC7-228ENST00000548938 NFIXQ14938 502 aa15.06■□□□□ 0
HDAC7-228ENST00000548938 QPCTQ16769 361 aa15.06■□□□□ 0
HDAC7-228ENST00000548938 LRIG3Q6UXM1 1119 aa15.06■□□□□ 0
HDAC7-228ENST00000548938 DZIP1Q86YF9 867 aaKnown RBP15.06■□□□□ 0
HDAC7-228ENST00000548938 MYOCDQ8IZQ8 938 aa15.06■□□□□ 0
HDAC7-228ENST00000548938 REXO1Q8N1G1 1221 aaKnown RBP15.06■□□□□ 0
HDAC7-228ENST00000548938 TAF4BQ92750 862 aa15.06■□□□□ 0
HDAC7-228ENST00000548938 SPZ1Q9BXG8 430 aa15.06■□□□□ 0
HDAC7-228ENST00000548938 FGFBP2Q9BYJ0 223 aa15.06■□□□□ 0
HDAC7-228ENST00000548938 NUCKS1Q9H1E3 243 aaKnown RBP15.06■□□□□ 0
HDAC7-228ENST00000548938 VAT1LQ9HCJ6 419 aa15.06■□□□□ 0
HDAC7-228ENST00000548938 GGA2Q9UJY4 613 aa15.06■□□□□ 0
HDAC7-228ENST00000548938 COL24A1Q17RW2 1714 aa15.06■□□□□ 0
HDAC7-228ENST00000548938 SRRM3A6NNA2 597 aaPredicted RBP15.06■□□□□ 0
HDAC7-228ENST00000548938 CHUKO15111 745 aa15.06■□□□□ 0
HDAC7-228ENST00000548938 TDP2O95551 362 aa15.06■□□□□ 0
HDAC7-228ENST00000548938 TMOD1P28289 359 aa15.06■□□□□ 0
HDAC7-228ENST00000548938 GNA11P29992 359 aa15.06■□□□□ 0
HDAC7-228ENST00000548938 HIBADHP31937 336 aaKnown RBP15.06■□□□□ 0
HDAC7-228ENST00000548938 CTNNA1P35221 906 aaKnown RBP15.06■□□□□ 0
HDAC7-228ENST00000548938 KLHL30Q0D2K2 578 aa15.06■□□□□ 0
HDAC7-228ENST00000548938 PLCB4Q15147 1175 aa15.06■□□□□ 0
HDAC7-228ENST00000548938 USP17L2Q6R6M4 530 aa15.06■□□□□ 0
HDAC7-228ENST00000548938 DNAAF5Q86Y56 855 aa15.06■□□□□ 0
HDAC7-228ENST00000548938 ARFGAP2Q8N6H7 521 aa15.06■□□□□ 0
HDAC7-228ENST00000548938 SNX29Q8TEQ0 813 aa15.06■□□□□ 0
HDAC7-228ENST00000548938 RIC8AQ9NPQ8 531 aa15.06■□□□□ 0
HDAC7-228ENST00000548938 DDX20Q9UHI6 824 aaKnown RBP15.06■□□□□ 0
HDAC7-228ENST00000548938 RPS8P62241 208 aaKnown RBP15.05■□□□□ 0
HDAC7-228ENST00000548938 FKBP3Q00688 224 aaKnown RBP15.05■□□□□ 0
HDAC7-228ENST00000548938 RPS6KA1Q15418 735 aa15.05■□□□□ 0
HDAC7-228ENST00000548938 SOGA3Q5TF21 947 aa15.05■□□□□ 0
HDAC7-228ENST00000548938 ARHGAP27Q6ZUM4 889 aa15.05■□□□□ 0
HDAC7-228ENST00000548938 CCDC121Q6ZUS5 278 aa15.05■□□□□ 0
HDAC7-228ENST00000548938 PROM2Q8N271 834 aa15.05■□□□□ 0
HDAC7-228ENST00000548938 SH3RF3Q8TEJ3 882 aaPredicted RBP15.05■□□□□ 0
HDAC7-228ENST00000548938 AP1M1Q9BXS5 423 aa15.05■□□□□ 0
HDAC7-228ENST00000548938 BCCIPQ9P287 314 aaKnown RBP eCLIP15.05■□□□□ 0
HDAC7-228ENST00000548938 GMNCA6NCL1 334 aa15.05■□□□□ -0
HDAC7-228ENST00000548938 FXR2P51116 673 aaKnown RBP eCLIP15.05■□□□□ -0
HDAC7-228ENST00000548938 COASYQ13057 564 aa15.05■□□□□ -0
HDAC7-228ENST00000548938 ZNF444Q8N0Y2 327 aaPredicted RBP15.05■□□□□ -0
HDAC7-228ENST00000548938 PIGSQ96S52 555 aa15.05■□□□□ -0
HDAC7-228ENST00000548938 OSBPL7Q9BZF2 842 aa15.05■□□□□ -0
HDAC7-228ENST00000548938 TBC1D7Q9P0N9 293 aa15.05■□□□□ -0
HDAC7-228ENST00000548938 CCDC88AQ3V6T2 1871 aa15.04■□□□□ -0
HDAC7-228ENST00000548938 TRAPPC3O43617 180 aa15.04■□□□□ -0
HDAC7-228ENST00000548938 CEP104O60308 925 aa15.04■□□□□ -0
HDAC7-228ENST00000548938 KIF4AO95239 1232 aa15.04■□□□□ -0
HDAC7-228ENST00000548938 CCDC172P0C7W6 258 aa15.04■□□□□ -0
HDAC7-228ENST00000548938 ADRA2BP18089 450 aa15.04■□□□□ -0
HDAC7-228ENST00000548938 TM4SF1P30408 202 aa15.04■□□□□ -0
HDAC7-228ENST00000548938 FLT3P36888 993 aa15.04■□□□□ -0
HDAC7-228ENST00000548938 SAMD1Q6SPF0 538 aaPredicted RBP15.04■□□□□ -0
HDAC7-228ENST00000548938 CCDC114Q96M63 670 aa15.04■□□□□ -0
HDAC7-228ENST00000548938 LZTS2Q9BRK4 669 aa15.04■□□□□ -0
HDAC7-228ENST00000548938 CNOT8Q9UFF9 292 aaKnown RBP15.04■□□□□ -0
HDAC7-228ENST00000548938 FBXL5Q9UKA1 691 aa15.04■□□□□ -0
HDAC7-228ENST00000548938 DCDC2CA8MYV0 355 aa15.04■□□□□ -0
HDAC7-228ENST00000548938 RASA1P20936 1047 aa15.04■□□□□ -0
HDAC7-228ENST00000548938 CUL1Q13616 776 aa15.04■□□□□ -0
HDAC7-228ENST00000548938 ASIC2Q16515 512 aa15.04■□□□□ -0
HDAC7-228ENST00000548938 ECM1Q16610 540 aa15.04■□□□□ -0
HDAC7-228ENST00000548938 TMEM266Q2M3C6 531 aa15.04■□□□□ -0
HDAC7-228ENST00000548938 SLC27A3Q5K4L6 730 aa15.04■□□□□ -0
HDAC7-228ENST00000548938 TXNRD3Q86VQ6 643 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms