RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 RNF14Q9UBS8 474 aa15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 STAT3P40763 770 aa15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 SEC24CP53992 1094 aa15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 ADAM9Q13443 819 aa15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 GRAPQ13588 217 aa15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 ASIC2Q16515 512 aa15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 MAATS1Q7Z4T9 603 aa15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 GPBP1Q86WP2 473 aa15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 DDX42Q86XP3 938 aaKnown RBP eCLIP15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 USP38Q8NB14 1042 aa15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 GRAPLQ8TC17 118 aaPredicted RBP15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 LRRC27Q9C0I9 530 aa15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 NUCKS1Q9H1E3 243 aaKnown RBP15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 FAM170AA1A519 330 aa15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 UFL1O94874 794 aa15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 PLA2G4BP0C869 781 aa15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 SLC9A1P19634 815 aa15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 NR1D1P20393 614 aa15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 INPP5BP32019 993 aa15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 CASP5P51878 434 aa15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 FAM98CQ17RN3 349 aaKnown RBP15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 MFSD14BQ5SR56 506 aa15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 OR2W6PQ8NHA6 318 aa15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 ARHGEF1Q92888 912 aaKnown RBP15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 AP1M1Q9BXS5 423 aa15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 GANQ9H2C0 597 aa15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 KCTD10Q9H3F6 313 aa15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 LUC7LQ9NQ29 371 aaKnown RBP15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 PLAAQ9Y263 795 aa15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 RPS6KA4O75676 772 aa15.52■□□□□ 0.08
RAPGEF3-218ENST00000548919 SLURP2P0DP57 97 aa15.52■□□□□ 0.08
RAPGEF3-218ENST00000548919 HPDP32754 393 aaPredicted RBP15.52■□□□□ 0.08
RAPGEF3-218ENST00000548919 ERVK-9P63128 1117 aa15.52■□□□□ 0.08
RAPGEF3-218ENST00000548919 KCNH2Q12809 1159 aa15.52■□□□□ 0.08
RAPGEF3-218ENST00000548919 HLTFQ14527 1009 aaKnown RBP eCLIP15.52■□□□□ 0.08
RAPGEF3-218ENST00000548919 CEP85LQ5SZL2 805 aa15.52■□□□□ 0.08
RAPGEF3-218ENST00000548919 KDM7AQ6ZMT4 941 aa15.52■□□□□ 0.08
RAPGEF3-218ENST00000548919 BMP2KQ9NSY1 1161 aaPredicted RBP15.52■□□□□ 0.08
RAPGEF3-218ENST00000548919 EMILIN3Q9NT22 766 aa15.52■□□□□ 0.08
RAPGEF3-218ENST00000548919 PPP4R3AQ6IN85 833 aa15.52■□□□□ 0.07
RAPGEF3-218ENST00000548919 ZNF571Q7Z3V5 609 aaPredicted RBP15.52■□□□□ 0.07
RAPGEF3-218ENST00000548919 CEP63Q96MT8 703 aa15.52■□□□□ 0.07
RAPGEF3-218ENST00000548919 USP17L15C9J2P7 530 aa15.51■□□□□ 0.07
RAPGEF3-218ENST00000548919 USP17L10C9JJH3 530 aa15.51■□□□□ 0.07
RAPGEF3-218ENST00000548919 USP17L13C9JLJ4 530 aa15.51■□□□□ 0.07
RAPGEF3-218ENST00000548919 USP17L11C9JVI0 530 aa15.51■□□□□ 0.07
RAPGEF3-218ENST00000548919 USP17L18D6R9N7 530 aa15.51■□□□□ 0.07
RAPGEF3-218ENST00000548919 USP17L22D6RA61 530 aa15.51■□□□□ 0.07
RAPGEF3-218ENST00000548919 USP17L17D6RBQ6 530 aa15.51■□□□□ 0.07
RAPGEF3-218ENST00000548919 USP17L19D6RCP7 530 aa15.51■□□□□ 0.07
RAPGEF3-218ENST00000548919 USP17L20D6RJB6 530 aa15.51■□□□□ 0.07
RAPGEF3-218ENST00000548919 NOVP48745 357 aa15.51■□□□□ 0.07
RAPGEF3-218ENST00000548919 USP17L24Q0WX57 530 aa15.51■□□□□ 0.07
RAPGEF3-218ENST00000548919 ASPRV1Q53RT3 343 aa15.51■□□□□ 0.07
RAPGEF3-218ENST00000548919 USP17L6PQ6QN14 398 aa15.51■□□□□ 0.07
RAPGEF3-218ENST00000548919 KCTD1Q719H9 257 aa15.51■□□□□ 0.07
RAPGEF3-218ENST00000548919 CCDC65Q8IXS2 484 aa15.51■□□□□ 0.07
RAPGEF3-218ENST00000548919 AIPL1Q9NZN9 384 aa15.51■□□□□ 0.07
RAPGEF3-218ENST00000548919 RPS6KA1Q15418 735 aa15.51■□□□□ 0.07
RAPGEF3-218ENST00000548919 MREGQ8N565 214 aa15.51■□□□□ 0.07
RAPGEF3-218ENST00000548919 TAF4BQ92750 862 aa15.51■□□□□ 0.07
RAPGEF3-218ENST00000548919 COL24A1Q17RW2 1714 aa15.5■□□□□ 0.07
RAPGEF3-218ENST00000548919 PNMA6FA0A0J9YX94 578 aa15.5■□□□□ 0.07
RAPGEF3-218ENST00000548919 POTEFA5A3E0 1075 aa15.5■□□□□ 0.07
RAPGEF3-218ENST00000548919 hCG_1984214I3L0E3 225 aa15.5■□□□□ 0.07
RAPGEF3-218ENST00000548919 CEP104O60308 925 aa15.5■□□□□ 0.07
RAPGEF3-218ENST00000548919 KRT18P05783 430 aaKnown RBP15.5■□□□□ 0.07
RAPGEF3-218ENST00000548919 POTEIP0CG38 1075 aa15.5■□□□□ 0.07
RAPGEF3-218ENST00000548919 CYP11B2P19099 503 aa15.5■□□□□ 0.07
RAPGEF3-218ENST00000548919 NR2F2P24468 414 aa15.5■□□□□ 0.07
RAPGEF3-218ENST00000548919 CLK2P49760 499 aaKnown RBP15.5■□□□□ 0.07
RAPGEF3-218ENST00000548919 ARSHQ5FYA8 562 aa15.5■□□□□ 0.07
RAPGEF3-218ENST00000548919 NAA35Q5VZE5 725 aa15.5■□□□□ 0.07
RAPGEF3-218ENST00000548919 POTEGQ6S5H5 508 aa15.5■□□□□ 0.07
RAPGEF3-218ENST00000548919 POTEEQ6S8J3 1075 aa15.5■□□□□ 0.07
RAPGEF3-218ENST00000548919 ZNF713Q8N859 430 aaPredicted RBP15.5■□□□□ 0.07
RAPGEF3-218ENST00000548919 CUL5Q93034 780 aa15.5■□□□□ 0.07
RAPGEF3-218ENST00000548919 ATP6V1G3Q96LB4 118 aa15.5■□□□□ 0.07
RAPGEF3-218ENST00000548919 EPN3Q9H201 632 aa15.5■□□□□ 0.07
RAPGEF3-218ENST00000548919 F8W031 263 aaPredicted RBP15.5■□□□□ 0.07
RAPGEF3-218ENST00000548919 RAD21O60216 631 aa15.5■□□□□ 0.07
RAPGEF3-218ENST00000548919 ECHS1P30084 290 aa15.5■□□□□ 0.07
RAPGEF3-218ENST00000548919 TNNC1P63316 161 aa15.5■□□□□ 0.07
RAPGEF3-218ENST00000548919 FAM182BQ5T319 152 aa15.5■□□□□ 0.07
RAPGEF3-218ENST00000548919 MMS22LQ6ZRQ5 1243 aa15.5■□□□□ 0.07
RAPGEF3-218ENST00000548919 ARHGAP27Q6ZUM4 889 aa15.5■□□□□ 0.07
RAPGEF3-218ENST00000548919 IRF2BP2Q7Z5L9 587 aa15.5■□□□□ 0.07
RAPGEF3-218ENST00000548919 WHAMMQ8TF30 809 aa15.5■□□□□ 0.07
RAPGEF3-218ENST00000548919 PSTPIP2Q9H939 334 aa15.5■□□□□ 0.07
RAPGEF3-218ENST00000548919 MEIS1O00470 390 aa15.49■□□□□ 0.07
RAPGEF3-218ENST00000548919 MED24O75448 989 aa15.49■□□□□ 0.07
RAPGEF3-218ENST00000548919 ZNF543Q08ER8 600 aa15.49■□□□□ 0.07
RAPGEF3-218ENST00000548919 SEPT2Q15019 361 aa15.49■□□□□ 0.07
RAPGEF3-218ENST00000548919 PTGISQ16647 500 aa15.49■□□□□ 0.07
RAPGEF3-218ENST00000548919 KCNV1Q6PIU1 500 aa15.49■□□□□ 0.07
RAPGEF3-218ENST00000548919 SPAG5Q96R06 1193 aa15.49■□□□□ 0.07
RAPGEF3-218ENST00000548919 DDX47Q9H0S4 455 aaKnown RBP15.49■□□□□ 0.07
RAPGEF3-218ENST00000548919 NEUROG2Q9H2A3 272 aa15.49■□□□□ 0.07
RAPGEF3-218ENST00000548919 TAF1DQ9H5J8 278 aaPredicted RBP15.49■□□□□ 0.07
RAPGEF3-218ENST00000548919 BCAS3Q9H6U6 928 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms