RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 HDAC1Q13547 482 aaPredicted RBP9.87□□□□□ -0.83
TROAP-208ENST00000548817 MTMR3Q13615 1198 aa9.87□□□□□ -0.83
TROAP-208ENST00000548817 STXBP2Q15833 593 aa9.87□□□□□ -0.83
TROAP-208ENST00000548817 ARHGEF16Q5VV41 709 aa9.87□□□□□ -0.83
TROAP-208ENST00000548817 SEPT14Q6ZU15 432 aa9.87□□□□□ -0.83
TROAP-208ENST00000548817 CHST3Q7LGC8 479 aa9.87□□□□□ -0.83
TROAP-208ENST00000548817 ZBTB33Q86T24 672 aa9.87□□□□□ -0.83
TROAP-208ENST00000548817 SERINC5Q86VE9 423 aa9.87□□□□□ -0.83
TROAP-208ENST00000548817 EMID1Q96A84 441 aaPredicted RBP9.87□□□□□ -0.83
TROAP-208ENST00000548817 IWS1Q96ST2 819 aa9.87□□□□□ -0.83
TROAP-208ENST00000548817 ZKSCAN3Q9BRR0 538 aa9.87□□□□□ -0.83
TROAP-208ENST00000548817 UBA5Q9GZZ9 404 aa9.87□□□□□ -0.83
TROAP-208ENST00000548817 RWDD1Q9H446 243 aaPredicted RBP9.87□□□□□ -0.83
TROAP-208ENST00000548817 RC3H2Q9HBD1 1191 aaKnown RBP9.87□□□□□ -0.83
TROAP-208ENST00000548817 DIAPH3Q9NSV4 1193 aa9.87□□□□□ -0.83
TROAP-208ENST00000548817 SORCS3Q9UPU3 1222 aa9.87□□□□□ -0.83
TROAP-208ENST00000548817 MRPL11Q9Y3B7 192 aaKnown RBP9.87□□□□□ -0.83
TROAP-208ENST00000548817 HIP1O00291 1037 aa9.86□□□□□ -0.83
TROAP-208ENST00000548817 PARP1P09874 1014 aaKnown RBP9.86□□□□□ -0.83
TROAP-208ENST00000548817 SNHG28P0DPA3 235 aa9.86□□□□□ -0.83
TROAP-208ENST00000548817 THPOP40225 353 aa9.86□□□□□ -0.83
TROAP-208ENST00000548817 AAMPQ13685 434 aa9.86□□□□□ -0.83
TROAP-208ENST00000548817 CAMK1Q14012 370 aa9.86□□□□□ -0.83
TROAP-208ENST00000548817 MFSD10Q14728 455 aa9.86□□□□□ -0.83
TROAP-208ENST00000548817 CDC37Q16543 378 aaPredicted RBP9.86□□□□□ -0.83
TROAP-208ENST00000548817 KIAA0753Q2KHM9 967 aa9.86□□□□□ -0.83
TROAP-208ENST00000548817 ASPRV1Q53RT3 343 aa9.86□□□□□ -0.83
TROAP-208ENST00000548817 ZNF589Q86UQ0 364 aaPredicted RBP9.86□□□□□ -0.83
TROAP-208ENST00000548817 PNMA1Q8ND90 353 aa9.86□□□□□ -0.83
TROAP-208ENST00000548817 WNT8BQ93098 351 aa9.86□□□□□ -0.83
TROAP-208ENST00000548817 RMDN3Q96TC7 470 aa9.86□□□□□ -0.83
TROAP-208ENST00000548817 LNPKQ9C0E8 428 aa9.86□□□□□ -0.83
TROAP-208ENST00000548817 VAT1LQ9HCJ6 419 aa9.86□□□□□ -0.83
TROAP-208ENST00000548817 PLAGL2Q9UPG8 496 aa9.86□□□□□ -0.83
TROAP-208ENST00000548817 SPTBN2O15020 2390 aa9.86□□□□□ -0.83
TROAP-208ENST00000548817 MYH6P13533 1939 aa9.86□□□□□ -0.83
TROAP-208ENST00000548817 EIF3JO75822 258 aaKnown RBP9.85□□□□□ -0.83
TROAP-208ENST00000548817 ARIH2O95376 493 aa9.85□□□□□ -0.83
TROAP-208ENST00000548817 GLP2RO95838 553 aa9.85□□□□□ -0.83
TROAP-208ENST00000548817 LMNAP02545 664 aaKnown RBP9.85□□□□□ -0.83
TROAP-208ENST00000548817 HOXD8P13378 290 aaPredicted RBP9.85□□□□□ -0.83
TROAP-208ENST00000548817 SDSP20132 328 aa9.85□□□□□ -0.83
TROAP-208ENST00000548817 SDHBP21912 280 aa9.85□□□□□ -0.83
TROAP-208ENST00000548817 IMMTQ16891 758 aaKnown RBP9.85□□□□□ -0.83
TROAP-208ENST00000548817 LY6KQ17RY6 165 aa9.85□□□□□ -0.83
TROAP-208ENST00000548817 B4GALNT3Q6L9W6 998 aa9.85□□□□□ -0.83
TROAP-208ENST00000548817 TBC1D10CQ8IV04 446 aa9.85□□□□□ -0.83
TROAP-208ENST00000548817 DHX37Q8IY37 1157 aaKnown RBP9.85□□□□□ -0.83
TROAP-208ENST00000548817 ADGRF4Q8IZF3 695 aa9.85□□□□□ -0.83
TROAP-208ENST00000548817 KREMEN2Q8NCW0 462 aa9.85□□□□□ -0.83
TROAP-208ENST00000548817 TAAR1Q96RJ0 339 aa9.85□□□□□ -0.83
TROAP-208ENST00000548817 ZSCAN10Q96SZ4 725 aaPredicted RBP9.85□□□□□ -0.83
TROAP-208ENST00000548817 CDCA3Q99618 268 aaPredicted RBP9.85□□□□□ -0.83
TROAP-208ENST00000548817 UBAC1Q9BSL1 405 aa9.85□□□□□ -0.83
TROAP-208ENST00000548817 KRT23Q9C075 422 aa9.85□□□□□ -0.83
TROAP-208ENST00000548817 NR2E1Q9Y466 385 aa9.85□□□□□ -0.83
TROAP-208ENST00000548817 PCDHGC5Q9Y5F6 944 aa9.85□□□□□ -0.83
TROAP-208ENST00000548817 MRVI1Q9Y6F6 885 aa9.85□□□□□ -0.83
TROAP-208ENST00000548817 CFBP00751 764 aa9.84□□□□□ -0.83
TROAP-208ENST00000548817 SRGAP2BP0DMP2 458 aa9.84□□□□□ -0.83
TROAP-208ENST00000548817 EIF2AK2P19525 551 aaKnown RBP9.84□□□□□ -0.83
TROAP-208ENST00000548817 NRIP1P48552 1158 aa9.84□□□□□ -0.83
TROAP-208ENST00000548817 TRAF1Q13077 416 aa9.84□□□□□ -0.83
TROAP-208ENST00000548817 LAMC2Q13753 1193 aa9.84□□□□□ -0.83
TROAP-208ENST00000548817 BTG3Q14201 252 aaPredicted RBP9.84□□□□□ -0.83
TROAP-208ENST00000548817 ST3GAL2Q16842 350 aa9.84□□□□□ -0.83
TROAP-208ENST00000548817 KCNV1Q6PIU1 500 aa9.84□□□□□ -0.83
TROAP-208ENST00000548817 CWC27Q6UX04 472 aaKnown RBP9.84□□□□□ -0.83
TROAP-208ENST00000548817 PPTC7Q8NI37 304 aa9.84□□□□□ -0.83
TROAP-208ENST00000548817 SYTL5Q8TDW5 730 aaPredicted RBP9.84□□□□□ -0.83
TROAP-208ENST00000548817 ATP8B4Q8TF62 1192 aa9.84□□□□□ -0.83
TROAP-208ENST00000548817 NEK1Q96PY6 1258 aa9.84□□□□□ -0.83
TROAP-208ENST00000548817 ALG1Q9BT22 464 aa9.84□□□□□ -0.83
TROAP-208ENST00000548817 CPVLQ9H3G5 476 aa9.84□□□□□ -0.83
TROAP-208ENST00000548817 CNNM2Q9H8M5 875 aa9.84□□□□□ -0.83
TROAP-208ENST00000548817 BARX2Q9UMQ3 279 aaPredicted RBP9.84□□□□□ -0.83
TROAP-208ENST00000548817 KIAA1217Q5T5P2 1943 aa9.84□□□□□ -0.83
TROAP-208ENST00000548817 NEDD4P46934 1319 aa9.83□□□□□ -0.84
TROAP-208ENST00000548817 B4E1Z4 1266 aa9.83□□□□□ -0.84
TROAP-208ENST00000548817 PPFIA4O75335 1185 aa9.83□□□□□ -0.84
TROAP-208ENST00000548817 NR3C2P08235 984 aa9.83□□□□□ -0.84
TROAP-208ENST00000548817 MYCLP12524 364 aaPredicted RBP9.83□□□□□ -0.84
TROAP-208ENST00000548817 HOXC8P31273 242 aa9.83□□□□□ -0.84
TROAP-208ENST00000548817 QRICH1Q2TAL8 776 aa9.83□□□□□ -0.84
TROAP-208ENST00000548817 IFIT1BQ5T764 474 aaKnown RBP9.83□□□□□ -0.84
TROAP-208ENST00000548817 TMEM184AQ6ZMB5 413 aa9.83□□□□□ -0.84
TROAP-208ENST00000548817 ADGRD2Q7Z7M1 963 aa9.83□□□□□ -0.84
TROAP-208ENST00000548817 CCDC105Q8IYK2 499 aa9.83□□□□□ -0.84
TROAP-208ENST00000548817 SPPL3Q8TCT6 385 aa9.83□□□□□ -0.84
TROAP-208ENST00000548817 KCNG4Q8TDN1 519 aa9.83□□□□□ -0.84
TROAP-208ENST00000548817 TBC1D5Q92609 795 aa9.83□□□□□ -0.84
TROAP-208ENST00000548817 ZNF689Q96CS4 500 aaPredicted RBP9.83□□□□□ -0.84
TROAP-208ENST00000548817 AMNQ9BXJ7 453 aa9.83□□□□□ -0.84
TROAP-208ENST00000548817 MFSD1Q9H3U5 465 aa9.83□□□□□ -0.84
TROAP-208ENST00000548817 TLE6Q9H808 572 aa9.83□□□□□ -0.84
TROAP-208ENST00000548817 DDX41Q9UJV9 622 aaKnown RBP9.83□□□□□ -0.84
TROAP-208ENST00000548817 MYH7BA7E2Y1 1941 aa9.83□□□□□ -0.84
TROAP-208ENST00000548817 TTC3P53804 2025 aa9.82□□□□□ -0.84
TROAP-208ENST00000548817 BRD1O95696 1058 aa9.82□□□□□ -0.84
TROAP-208ENST00000548817 ITGB1P05556 798 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms