RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 COA7Q96BR5 231 aa10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 PBKQ96KB5 322 aa10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 GANQ9H2C0 597 aa10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 TAF1DQ9H5J8 278 aaPredicted RBP10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 RABEP2Q9H5N1 569 aa10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 PLCB1Q9NQ66 1216 aa10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 ANKIB1Q9P2G1 1089 aa10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 ADAMTS1Q9UHI8 967 aa10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 PCDHA2Q9Y5H9 948 aa10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 ATP8B3O60423 1300 aa10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 RAD51CO43502 376 aa10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 KCNQ2O43526 872 aa10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 FSBPO95073 299 aa10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 MDH1P40925 334 aaKnown RBP10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 CLK2P49760 499 aaKnown RBP10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 GUCY2FP51841 1108 aa10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 ITGB3BPQ13352 177 aaPredicted RBP10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 RPS6KA1Q15418 735 aa10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 PTGISQ16647 500 aa10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 EDRF1Q3B7T1 1238 aa10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 NAA35Q5VZE5 725 aa10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 MCTP2Q6DN12 878 aa10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 ARFGAP2Q8N6H7 521 aa10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 PRPF38AQ8NAV1 312 aaKnown RBP10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 ACTRT1Q8TDG2 376 aa10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 SCFD2Q8WU76 684 aa10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 HAS1Q92839 578 aa10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 CALR3Q96L12 384 aaKnown RBP10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 NAP1L4Q99733 375 aaKnown RBP10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 KCTD10Q9H3F6 313 aa10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 DDX25Q9UHL0 483 aaKnown RBP10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 BZW2Q9Y6E2 419 aaKnown RBP10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 BHMG1C9JSJ3 638 aaPredicted RBP10.84□□□□□ -0.67
SMARCD1-205ENST00000548573 HNRNPH1P31943 449 aaKnown RBP10.84□□□□□ -0.67
SMARCD1-205ENST00000548573 TNNI2P48788 182 aa10.84□□□□□ -0.67
SMARCD1-205ENST00000548573 USP11P51784 963 aa10.84□□□□□ -0.67
SMARCD1-205ENST00000548573 RC3H1Q5TC82 1133 aaKnown RBP10.84□□□□□ -0.67
SMARCD1-205ENST00000548573 OTUD6BQ8N6M0 293 aa10.84□□□□□ -0.67
SMARCD1-205ENST00000548573 FAM133AQ8N9E0 248 aa10.84□□□□□ -0.67
SMARCD1-205ENST00000548573 ZNF473Q8WTR7 871 aaKnown RBP10.84□□□□□ -0.67
SMARCD1-205ENST00000548573 SCFD1Q8WVM8 642 aa10.84□□□□□ -0.67
SMARCD1-205ENST00000548573 FAM163AQ96GL9 167 aaPredicted RBP10.84□□□□□ -0.67
SMARCD1-205ENST00000548573 TMBIM4Q9HC24 238 aa10.84□□□□□ -0.67
SMARCD1-205ENST00000548573 PCDHA12Q9UN75 941 aa10.84□□□□□ -0.67
SMARCD1-205ENST00000548573 KIF13BQ9NQT8 1826 aa10.84□□□□□ -0.67
SMARCD1-205ENST00000548573 PNMA6FA0A0J9YX94 578 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 FRMD3A2A2Y4 597 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 GOLGA6L10A6NI86 522 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 CETN3O15182 167 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 RPS6KA4O75676 772 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 KIF4AO95239 1232 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 ANXA13P27216 316 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 EPS15P42566 896 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 FNTAP49354 379 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 GUCY1A3Q02108 690 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 GRAPQ13588 217 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 BARGINQ6ZT62 677 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 C3orf20Q8ND61 904 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 GRAPLQ8TC17 118 aaPredicted RBP10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 LRRC45Q96CN5 670 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 PACSIN1Q9BY11 444 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 EMILIN3Q9NT22 766 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 MTMR4Q9NYA4 1195 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 SWAP70Q9UH65 585 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 PACSIN2Q9UNF0 486 aaPredicted RBP10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 PLAAQ9Y263 795 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 FRMPD2Q68DX3 1309 aaPredicted RBP10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 KCNK3O14649 394 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 ZPR1O75312 459 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 FAM107AO95990 144 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 PLA2G4BP0C869 781 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 ECHS1P30084 290 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 DNA2P51530 1060 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 MRPL12P52815 198 aaKnown RBP10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 RHBDL3P58872 404 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 KCNH2Q12809 1159 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 ADAM9Q13443 819 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 CEP85LQ5SZL2 805 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 IRF2BP2Q7Z5L9 587 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 NLRP14Q86W24 1093 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 SLF2Q8IX21 1173 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 KLHL7Q8IXQ5 586 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 MYCBPAPQ8TBZ2 947 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 CUL5Q93034 780 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 FGFBP2Q9BYJ0 223 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 SRP68Q9UHB9 627 aaKnown RBP10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 SPATA31A5Q5VU36 1347 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 SPATA31A7Q8IWB4 1347 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 PITPNM2Q9BZ72 1349 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 C10orf71Q711Q0 1435 aa10.83□□□□□ -0.68
SMARCD1-205ENST00000548573 AHDC1Q5TGY3 1603 aaPredicted RBP10.82□□□□□ -0.68
SMARCD1-205ENST00000548573 CCDC188H7C350 402 aa10.82□□□□□ -0.68
SMARCD1-205ENST00000548573 GCOM1H8Y6P7 765 aaPredicted RBP10.82□□□□□ -0.68
SMARCD1-205ENST00000548573 MARCH6O60337 910 aa10.82□□□□□ -0.68
SMARCD1-205ENST00000548573 MYZAPP0CAP1 466 aa10.82□□□□□ -0.68
SMARCD1-205ENST00000548573 CYP11B2P19099 503 aa10.82□□□□□ -0.68
SMARCD1-205ENST00000548573 PRKCIP41743 596 aa10.82□□□□□ -0.68
SMARCD1-205ENST00000548573 ERVK-9P63128 1117 aa10.82□□□□□ -0.68
SMARCD1-205ENST00000548573 ARID5AQ03989 594 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms