RNA–Protein interactions for RNA: ENST00000548557.1

CASC18-202, Transcript of cancer susceptibility 18, humanhuman

TSL 1 (best) BASIC

Gene CASC18, Length 2,503 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC18-202ENST00000548557 AP3B2Q13367 1082 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 DHX8Q14562 1220 aaKnown RBP7.33□□□□□ -1.24
CASC18-202ENST00000548557 TTC39BQ5VTQ0 682 aaPredicted RBP7.33□□□□□ -1.24
CASC18-202ENST00000548557 SNRNP48Q6IEG0 339 aaKnown RBP7.33□□□□□ -1.24
CASC18-202ENST00000548557 CYP4F22Q6NT55 531 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 SHC4Q6S5L8 630 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 KRT25Q7Z3Z0 450 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 RIOX2Q8IUF8 465 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 RPUSD2Q8IZ73 545 aaKnown RBP7.33□□□□□ -1.24
CASC18-202ENST00000548557 JMYQ8N9B5 988 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 CHST13Q8NET6 341 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 TNFRSF25Q93038 417 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 CAPNS2Q96L46 248 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 NAP1L4Q99733 375 aaKnown RBP7.33□□□□□ -1.24
CASC18-202ENST00000548557 RBPJLQ9UBG7 517 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 TUBE1Q9UJT0 475 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 PARP14Q460N5 1801 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 IGF2BP3O00425 579 aaKnown RBP eCLIP7.33□□□□□ -1.24
CASC18-202ENST00000548557 BIN1O00499 593 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 MEIS2O14770 477 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 OPLAHO14841 1288 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 IKBKBO14920 756 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 RECKO95980 971 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 CYP2C8P10632 490 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 ALAS1P13196 640 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 MAP2K2P36507 400 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 SYKP43405 635 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 TRAPPC10P48553 1259 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 CLK2P49760 499 aaKnown RBP7.33□□□□□ -1.24
CASC18-202ENST00000548557 CCNA1P78396 465 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 NR5A1Q13285 461 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 RILPL1Q5EBL4 403 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 CEP135Q66GS9 1140 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 CCDC70Q6NSX1 233 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 POTEEQ6S8J3 1075 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 PDCL2Q8N4E4 241 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 SHCBP1Q8NEM2 672 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 TRERF1Q96PN7 1200 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 XPO4Q9C0E2 1151 aaKnown RBP7.33□□□□□ -1.24
CASC18-202ENST00000548557 SPATC1LQ9H0A9 340 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 IFT122Q9HBG6 1241 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.33□□□□□ -1.24
CASC18-202ENST00000548557 BTBD7Q9P203 1132 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 MORF4L1Q9UBU8 362 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 PCDHA6Q9UN73 950 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 PCDHA8Q9Y5H6 950 aa7.33□□□□□ -1.24
CASC18-202ENST00000548557 GCOM1H8Y6P7 765 aaPredicted RBP7.32□□□□□ -1.24
CASC18-202ENST00000548557 POLR2MP0CAP2 368 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 HSD17B4P51659 736 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 TPM4P67936 248 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 NCBP1Q09161 790 aaKnown RBP7.32□□□□□ -1.24
CASC18-202ENST00000548557 PLS1Q14651 629 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 E2F5Q15329 346 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 FAM110CQ1W6H9 321 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 CCDC92Q53HC0 331 aaPredicted RBP7.32□□□□□ -1.24
CASC18-202ENST00000548557 RESP18Q5W5W9 173 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 CCAR2Q8N163 923 aaKnown RBP7.32□□□□□ -1.24
CASC18-202ENST00000548557 CCDC112Q8NEF3 446 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 GPRC5AQ8NFJ5 357 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 OXER1Q8TDS5 423 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 CLEC4DQ8WXI8 215 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 CCDC47Q96A33 483 aaKnown RBP7.32□□□□□ -1.24
CASC18-202ENST00000548557 ACAD9Q9H845 621 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 RNF146Q9NTX7 359 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 IFNKQ9P0W0 207 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 RIPK3Q9Y572 518 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 CUTAO60888 179 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 CNMDO75829 334 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 CFBP00751 764 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 S100BP04271 92 aaPredicted RBP7.32□□□□□ -1.24
CASC18-202ENST00000548557 FAM163BP0C2L3 166 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 ERCC5P28715 1186 aaPredicted RBP7.32□□□□□ -1.24
CASC18-202ENST00000548557 CASQ1P31415 396 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 ERVK-9P63128 1117 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 ERVK-24P63145 666 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 KCTD2Q14681 263 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 NONOQ15233 471 aaKnown RBP eCLIP7.32□□□□□ -1.24
CASC18-202ENST00000548557 TAF1CQ15572 869 aaPredicted RBP7.32□□□□□ -1.24
CASC18-202ENST00000548557 PTPN14Q15678 1187 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 ENOX2Q16206 610 aaKnown RBP7.32□□□□□ -1.24
CASC18-202ENST00000548557 LONRF1Q17RB8 773 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 MAP9Q49MG5 647 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 ZC3H12AQ5D1E8 599 aaKnown RBP7.32□□□□□ -1.24
CASC18-202ENST00000548557 NPAS4Q8IUM7 802 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 GPIHBP1Q8IV16 184 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 CCDC150Q8NCX0 1101 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 VPS37AQ8NEZ2 397 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 MPHOSPH6Q99547 160 aaKnown RBP7.32□□□□□ -1.24
CASC18-202ENST00000548557 MOV10L1Q9BXT6 1211 aaKnown RBP7.32□□□□□ -1.24
CASC18-202ENST00000548557 HSD3B7Q9H2F3 369 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 ZHX3Q9H4I2 956 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 MROH8Q9H579 483 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 ZFYVE28Q9HCC9 887 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 TXNRD2Q9NNW7 524 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 CEP83Q9Y592 693 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 A0A0G2JMZ2 1700 aa7.32□□□□□ -1.24
CASC18-202ENST00000548557 SPDYE3A6NKU9 549 aa7.31□□□□□ -1.24
CASC18-202ENST00000548557 CA12O43570 354 aa7.31□□□□□ -1.24
CASC18-202ENST00000548557 TIMM44O43615 452 aa7.31□□□□□ -1.24
CASC18-202ENST00000548557 TLR2O60603 784 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms