RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 SMAD2Q15796 467 aaKnown RBP4.03□□□□□ -1.76
DEPDC4-204ENST00000547823 VASNQ6EMK4 673 aa4.03□□□□□ -1.76
DEPDC4-204ENST00000547823 TCTN3Q6NUS6 607 aa4.03□□□□□ -1.76
DEPDC4-204ENST00000547823 KIAA1211LQ6NV74 962 aa4.03□□□□□ -1.76
DEPDC4-204ENST00000547823 VHLLQ6RSH7 139 aa4.03□□□□□ -1.76
DEPDC4-204ENST00000547823 ZNF513Q8N8E2 541 aaPredicted RBP4.03□□□□□ -1.76
DEPDC4-204ENST00000547823 GIPC2Q8TF65 315 aa4.03□□□□□ -1.76
DEPDC4-204ENST00000547823 FRS2Q8WU20 508 aa4.03□□□□□ -1.76
DEPDC4-204ENST00000547823 FAM89AQ96GI7 184 aa4.03□□□□□ -1.76
DEPDC4-204ENST00000547823 TRIM8Q9BZR9 551 aa4.03□□□□□ -1.76
DEPDC4-204ENST00000547823 SMOC1Q9H4F8 434 aa4.03□□□□□ -1.76
DEPDC4-204ENST00000547823 WDR26Q9H7D7 661 aa4.03□□□□□ -1.76
DEPDC4-204ENST00000547823 ZFR2Q9UPR6 939 aaKnown RBP4.03□□□□□ -1.76
DEPDC4-204ENST00000547823 NUB1Q9Y5A7 615 aa4.03□□□□□ -1.76
DEPDC4-204ENST00000547823 PLB1Q6P1J6 1458 aa4.03□□□□□ -1.76
DEPDC4-204ENST00000547823 FHAD1B1AJZ9 1412 aa4.03□□□□□ -1.76
DEPDC4-204ENST00000547823 ASXL2Q76L83 1435 aa4.03□□□□□ -1.76
DEPDC4-204ENST00000547823 RUSC2Q8N2Y8 1516 aa4.02□□□□□ -1.77
DEPDC4-204ENST00000547823 KLHL18O94889 574 aa4.02□□□□□ -1.77
DEPDC4-204ENST00000547823 FBXO21O94952 628 aa4.02□□□□□ -1.77
DEPDC4-204ENST00000547823 LRG1P02750 347 aa4.02□□□□□ -1.77
DEPDC4-204ENST00000547823 HOXC12P31275 282 aa4.02□□□□□ -1.77
DEPDC4-204ENST00000547823 BCL6P41182 706 aa4.02□□□□□ -1.77
DEPDC4-204ENST00000547823 CASP7P55210 303 aa4.02□□□□□ -1.77
DEPDC4-204ENST00000547823 LSAMPQ13449 338 aa4.02□□□□□ -1.77
DEPDC4-204ENST00000547823 NLRP10Q86W26 655 aa4.02□□□□□ -1.77
DEPDC4-204ENST00000547823 ARRDC4Q8NCT1 418 aa4.02□□□□□ -1.77
DEPDC4-204ENST00000547823 PTPN18Q99952 460 aa4.02□□□□□ -1.77
DEPDC4-204ENST00000547823 GZF1Q9H116 711 aaPredicted RBP4.02□□□□□ -1.77
DEPDC4-204ENST00000547823 AURKAIP1Q9NWT8 199 aaPredicted RBP4.02□□□□□ -1.77
DEPDC4-204ENST00000547823 MYOTQ9UBF9 498 aa4.02□□□□□ -1.77
DEPDC4-204ENST00000547823 APEX2Q9UBZ4 518 aa4.02□□□□□ -1.77
DEPDC4-204ENST00000547823 PCDHB10Q9UN67 800 aa4.02□□□□□ -1.77
DEPDC4-204ENST00000547823 CUL7Q14999 1698 aa4.02□□□□□ -1.77
DEPDC4-204ENST00000547823 FOXS1O43638 330 aa4.01□□□□□ -1.77
DEPDC4-204ENST00000547823 NARSO43776 548 aaKnown RBP4.01□□□□□ -1.77
DEPDC4-204ENST00000547823 RAD17O75943 681 aa4.01□□□□□ -1.77
DEPDC4-204ENST00000547823 SCG5P05408 212 aa4.01□□□□□ -1.77
DEPDC4-204ENST00000547823 COL6A1P12109 1028 aa4.01□□□□□ -1.77
DEPDC4-204ENST00000547823 LTBRP36941 435 aa4.01□□□□□ -1.77
DEPDC4-204ENST00000547823 RAC3P60763 192 aa4.01□□□□□ -1.77
DEPDC4-204ENST00000547823 LSM12Q3MHD2 195 aaKnown RBP4.01□□□□□ -1.77
DEPDC4-204ENST00000547823 USP39Q53GS9 565 aaKnown RBP4.01□□□□□ -1.77
DEPDC4-204ENST00000547823 CCDC81Q6ZN84 652 aa4.01□□□□□ -1.77
DEPDC4-204ENST00000547823 POLNQ7Z5Q5 900 aa4.01□□□□□ -1.77
DEPDC4-204ENST00000547823 DTX3Q8N9I9 347 aa4.01□□□□□ -1.77
DEPDC4-204ENST00000547823 NUDT10Q8NFP7 164 aa4.01□□□□□ -1.77
DEPDC4-204ENST00000547823 NUDT11Q96G61 164 aa4.01□□□□□ -1.77
DEPDC4-204ENST00000547823 GINM1Q9NU53 330 aa4.01□□□□□ -1.77
DEPDC4-204ENST00000547823 ABCC2Q92887 1545 aa4□□□□□ -1.77
DEPDC4-204ENST00000547823 KIAA0586Q9BVV6 1533 aa4□□□□□ -1.77
DEPDC4-204ENST00000547823 MADDQ8WXG6 1647 aa4□□□□□ -1.77
DEPDC4-204ENST00000547823 A0A087X1B8 175 aa4□□□□□ -1.77
DEPDC4-204ENST00000547823 CUTAO60888 179 aa4□□□□□ -1.77
DEPDC4-204ENST00000547823 CSF2RBP32927 897 aa4□□□□□ -1.77
DEPDC4-204ENST00000547823 FANCCQ00597 558 aa4□□□□□ -1.77
DEPDC4-204ENST00000547823 USP10Q14694 798 aaKnown RBP4□□□□□ -1.77
DEPDC4-204ENST00000547823 PPP2R5EQ16537 467 aa4□□□□□ -1.77
DEPDC4-204ENST00000547823 TMC5Q6UXY8 1006 aa4□□□□□ -1.77
DEPDC4-204ENST00000547823 HOMEZQ8IX15 550 aa4□□□□□ -1.77
DEPDC4-204ENST00000547823 DNAJC10Q8IXB1 793 aa4□□□□□ -1.77
DEPDC4-204ENST00000547823 ZNF654Q8IZM8 581 aa4□□□□□ -1.77
DEPDC4-204ENST00000547823 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4□□□□□ -1.77
DEPDC4-204ENST00000547823 MRGPRX3Q96LB0 322 aa4□□□□□ -1.77
DEPDC4-204ENST00000547823 GNRHR2Q96P88 292 aa4□□□□□ -1.77
DEPDC4-204ENST00000547823 LRRC37BQ96QE4 947 aa4□□□□□ -1.77
DEPDC4-204ENST00000547823 KATNBL1Q9H079 304 aa4□□□□□ -1.77
DEPDC4-204ENST00000547823 IKZF4Q9H2S9 585 aa4□□□□□ -1.77
DEPDC4-204ENST00000547823 SLC30A1Q9Y6M5 507 aa4□□□□□ -1.77
DEPDC4-204ENST00000547823 BCORL1Q5H9F3 1711 aa4□□□□□ -1.77
DEPDC4-204ENST00000547823 EPRSP07814 1512 aaKnown RBP4□□□□□ -1.77
DEPDC4-204ENST00000547823 RIMS1Q86UR5 1692 aaKnown RBP4□□□□□ -1.77
DEPDC4-204ENST00000547823 KNG1P01042 644 aa3.99□□□□□ -1.77
DEPDC4-204ENST00000547823 ADH4P08319 380 aa3.99□□□□□ -1.77
DEPDC4-204ENST00000547823 NANOS3P60323 173 aaKnown RBP3.99□□□□□ -1.77
DEPDC4-204ENST00000547823 ZNF394Q53GI3 561 aa3.99□□□□□ -1.77
DEPDC4-204ENST00000547823 TAX1BP1Q86VP1 789 aa3.99□□□□□ -1.77
DEPDC4-204ENST00000547823 RASGRP4Q8TDF6 673 aa3.99□□□□□ -1.77
DEPDC4-204ENST00000547823 PPP1R14AQ96A00 147 aa3.99□□□□□ -1.77
DEPDC4-204ENST00000547823 NEIL1Q96FI4 390 aaPredicted RBP3.99□□□□□ -1.77
DEPDC4-204ENST00000547823 CHAMP1Q96JM3 812 aa3.99□□□□□ -1.77
DEPDC4-204ENST00000547823 PRRX2Q99811 253 aa3.99□□□□□ -1.77
DEPDC4-204ENST00000547823 PDGFDQ9GZP0 370 aaPredicted RBP3.99□□□□□ -1.77
DEPDC4-204ENST00000547823 CLDND1Q9NY35 253 aa3.99□□□□□ -1.77
DEPDC4-204ENST00000547823 ASH2LQ9UBL3 628 aa3.99□□□□□ -1.77
DEPDC4-204ENST00000547823 TMEFF2Q9UIK5 374 aaPredicted RBP3.99□□□□□ -1.77
DEPDC4-204ENST00000547823 DDX41Q9UJV9 622 aaKnown RBP3.99□□□□□ -1.77
DEPDC4-204ENST00000547823 STRIP2Q9ULQ0 834 aa3.99□□□□□ -1.77
DEPDC4-204ENST00000547823 EFR3BQ9Y2G0 817 aa3.99□□□□□ -1.77
DEPDC4-204ENST00000547823 H0Y858 1186 aa3.98□□□□□ -1.77
DEPDC4-204ENST00000547823 SNRPB2P08579 225 aaKnown RBP3.98□□□□□ -1.77
DEPDC4-204ENST00000547823 MAKP20794 623 aa3.98□□□□□ -1.77
DEPDC4-204ENST00000547823 ACRV1P26436 265 aa3.98□□□□□ -1.77
DEPDC4-204ENST00000547823 DNAJA1P31689 397 aaKnown RBP3.98□□□□□ -1.77
DEPDC4-204ENST00000547823 ZMAT1Q5H9K5 638 aa3.98□□□□□ -1.77
DEPDC4-204ENST00000547823 AGBL4Q5VU57 503 aa3.98□□□□□ -1.77
DEPDC4-204ENST00000547823 CCDC103Q8IW40 242 aa3.98□□□□□ -1.77
DEPDC4-204ENST00000547823 PPIL6Q8IXY8 311 aa3.98□□□□□ -1.77
DEPDC4-204ENST00000547823 RCBTB1Q8NDN9 531 aa3.98□□□□□ -1.77
DEPDC4-204ENST00000547823 GPRASP2Q96D09 838 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms