RNA–Protein interactions for RNA: ENST00000547188.1

PRDM4-202, Transcript of PR/SET domain 4, humanhuman

TSL 3

Gene PRDM4, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-202ENST00000547188 SETD4Q9NVD3 440 aa27.55■■■□□ 2
PRDM4-202ENST00000547188 SUPT16HQ9Y5B9 1047 aaKnown RBP27.55■■■□□ 2
PRDM4-202ENST00000547188 PPFIA3O75145 1194 aa27.54■■■□□ 2
PRDM4-202ENST00000547188 BRD1O95696 1058 aa27.54■■■□□ 2
PRDM4-202ENST00000547188 NR3C2P08235 984 aa27.54■■■□□ 2
PRDM4-202ENST00000547188 ZNF543Q08ER8 600 aa27.54■■■□□ 2
PRDM4-202ENST00000547188 DOCK5Q9H7D0 1870 aa27.53■■■□□ 2
PRDM4-202ENST00000547188 FAM26DQ5JW98 314 aa27.53■■■□□ 2
PRDM4-202ENST00000547188 ASTLQ6HA08 431 aaPredicted RBP27.53■■■□□ 2
PRDM4-202ENST00000547188 ATP8B4Q8TF62 1192 aa27.53■■■□□ 2
PRDM4-202ENST00000547188 CHRNA1P02708 482 aa27.52■■■□□ 2
PRDM4-202ENST00000547188 SP2Q02086 613 aa27.52■■■□□ 2
PRDM4-202ENST00000547188 PAN2Q504Q3 1202 aaKnown RBP27.52■■■□□ 2
PRDM4-202ENST00000547188 NAALADL2Q58DX5 795 aa27.52■■■□□ 2
PRDM4-202ENST00000547188 MICAL1Q8TDZ2 1067 aa27.52■■■□□ 2
PRDM4-202ENST00000547188 UBA5Q9GZZ9 404 aa27.52■■■□□ 2
PRDM4-202ENST00000547188 TSHZ2Q9NRE2 1034 aa27.52■■■□□ 2
PRDM4-202ENST00000547188 GOLGA8HP0CJ92 632 aa27.51■■□□□ 1.99
PRDM4-202ENST00000547188 MYCLP12524 364 aaPredicted RBP27.51■■□□□ 1.99
PRDM4-202ENST00000547188 MTMR3Q13615 1198 aa27.51■■□□□ 1.99
PRDM4-202ENST00000547188 NEK1Q96PY6 1258 aa27.51■■□□□ 1.99
PRDM4-202ENST00000547188 PXMP2Q9NR77 195 aa27.51■■□□□ 1.99
PRDM4-202ENST00000547188 TOMM22Q9NS69 142 aa27.51■■□□□ 1.99
PRDM4-202ENST00000547188 CEP250Q9BV73 2442 aa27.51■■□□□ 1.99
PRDM4-202ENST00000547188 LGALS2P05162 132 aa27.5■■□□□ 1.99
PRDM4-202ENST00000547188 KIAA2013Q8IYS2 634 aa27.5■■□□□ 1.99
PRDM4-202ENST00000547188 GPKOWQ92917 476 aaPredicted RBP eCLIP27.5■■□□□ 1.99
PRDM4-202ENST00000547188 ZFP91Q96JP5 570 aaPredicted RBP27.5■■□□□ 1.99
PRDM4-202ENST00000547188 S1PR5Q9H228 398 aa27.5■■□□□ 1.99
PRDM4-202ENST00000547188 BCAS3Q9H6U6 928 aa27.5■■□□□ 1.99
PRDM4-202ENST00000547188 SORCS3Q9UPU3 1222 aa27.5■■□□□ 1.99
PRDM4-202ENST00000547188 ABCB11O95342 1321 aa27.49■■□□□ 1.99
PRDM4-202ENST00000547188 FOXP2O15409 715 aa27.49■■□□□ 1.99
PRDM4-202ENST00000547188 ARP10275 920 aa27.49■■□□□ 1.99
PRDM4-202ENST00000547188 LPIN1Q14693 890 aa27.49■■□□□ 1.99
PRDM4-202ENST00000547188 RRP12Q5JTH9 1297 aaKnown RBP27.49■■□□□ 1.99
PRDM4-202ENST00000547188 UBALD2Q8IYN6 164 aa27.49■■□□□ 1.99
PRDM4-202ENST00000547188 CMTR2Q8IYT2 770 aaKnown RBP27.49■■□□□ 1.99
PRDM4-202ENST00000547188 LRRCC1Q9C099 1032 aa27.49■■□□□ 1.99
PRDM4-202ENST00000547188 CDH22Q9UJ99 828 aa27.49■■□□□ 1.99
PRDM4-202ENST00000547188 ACACBO00763 2458 aa27.49■■□□□ 1.99
PRDM4-202ENST00000547188 UBA1P22314 1058 aaKnown RBP27.48■■□□□ 1.99
PRDM4-202ENST00000547188 CDC37Q16543 378 aaPredicted RBP27.48■■□□□ 1.99
PRDM4-202ENST00000547188 MFSD1Q9H3U5 465 aa27.48■■□□□ 1.99
PRDM4-202ENST00000547188 EHMT1Q9H9B1 1298 aa27.48■■□□□ 1.99
PRDM4-202ENST00000547188 MLXIPQ9HAP2 919 aa27.48■■□□□ 1.99
PRDM4-202ENST00000547188 ORC4O43929 436 aa27.47■■□□□ 1.99
PRDM4-202ENST00000547188 ARHGAP4P98171 946 aa27.47■■□□□ 1.99
PRDM4-202ENST00000547188 DUSP6Q16828 381 aa27.47■■□□□ 1.99
PRDM4-202ENST00000547188 MCF2L2Q86YR7 1114 aa27.47■■□□□ 1.99
PRDM4-202ENST00000547188 KCNG4Q8TDN1 519 aa27.47■■□□□ 1.99
PRDM4-202ENST00000547188 LINC01599Q8WXQ3 324 aa27.47■■□□□ 1.99
PRDM4-202ENST00000547188 LOXHD1Q8IVV2 1947 aa27.47■■□□□ 1.99
PRDM4-202ENST00000547188 TECP42680 631 aa27.46■■□□□ 1.99
PRDM4-202ENST00000547188 GATMP50440 423 aa27.46■■□□□ 1.99
PRDM4-202ENST00000547188 SPTBN2O15020 2390 aa27.45■■□□□ 1.99
PRDM4-202ENST00000547188 CFBP00751 764 aa27.45■■□□□ 1.98
PRDM4-202ENST00000547188 SNHG28P0DPA3 235 aa27.45■■□□□ 1.98
PRDM4-202ENST00000547188 GNAT1P11488 350 aa27.45■■□□□ 1.98
PRDM4-202ENST00000547188 ANKRD54Q6NXT1 300 aa27.45■■□□□ 1.98
PRDM4-202ENST00000547188 SYCE2Q6PIF2 218 aa27.45■■□□□ 1.98
PRDM4-202ENST00000547188 RUFY4Q6ZNE9 571 aa27.45■■□□□ 1.98
PRDM4-202ENST00000547188 TRIM50Q86XT4 487 aa27.45■■□□□ 1.98
PRDM4-202ENST00000547188 CCDC171Q6TFL3 1326 aa27.44■■□□□ 1.98
PRDM4-202ENST00000547188 C2CD4DB7Z1M9 353 aa27.44■■□□□ 1.98
PRDM4-202ENST00000547188 HSPD1P10809 573 aaKnown RBP27.44■■□□□ 1.98
PRDM4-202ENST00000547188 ADAM17P78536 824 aa27.44■■□□□ 1.98
PRDM4-202ENST00000547188 FLCNQ8NFG4 579 aa27.44■■□□□ 1.98
PRDM4-202ENST00000547188 LMBR1Q8WVP7 490 aa27.44■■□□□ 1.98
PRDM4-202ENST00000547188 MAF1Q9H063 256 aa27.44■■□□□ 1.98
PRDM4-202ENST00000547188 ASGR2P07307 311 aa27.43■■□□□ 1.98
PRDM4-202ENST00000547188 CLCN5P51795 746 aa27.43■■□□□ 1.98
PRDM4-202ENST00000547188 ERVFC1P60507 584 aa27.43■■□□□ 1.98
PRDM4-202ENST00000547188 MGAT3Q09327 533 aa27.43■■□□□ 1.98
PRDM4-202ENST00000547188 PUM1Q14671 1186 aaKnown RBP eCLIP27.43■■□□□ 1.98
PRDM4-202ENST00000547188 LLGL2Q6P1M3 1020 aa27.43■■□□□ 1.98
PRDM4-202ENST00000547188 KCNV1Q6PIU1 500 aa27.43■■□□□ 1.98
PRDM4-202ENST00000547188 RTN4RL1Q86UN2 441 aaPredicted RBP27.43■■□□□ 1.98
PRDM4-202ENST00000547188 IL31RAQ8NI17 732 aa27.43■■□□□ 1.98
PRDM4-202ENST00000547188 PDCD2LQ9BRP1 358 aa27.43■■□□□ 1.98
PRDM4-202ENST00000547188 ANAPC4Q9UJX5 808 aa27.43■■□□□ 1.98
PRDM4-202ENST00000547188 NR2E1Q9Y466 385 aa27.43■■□□□ 1.98
PRDM4-202ENST00000547188 PI15O43692 258 aa27.42■■□□□ 1.98
PRDM4-202ENST00000547188 ANGPT1Q15389 498 aa27.42■■□□□ 1.98
PRDM4-202ENST00000547188 ZMYM1Q5SVZ6 1142 aa27.42■■□□□ 1.98
PRDM4-202ENST00000547188 CWF19L1Q69YN2 538 aaKnown RBP27.42■■□□□ 1.98
PRDM4-202ENST00000547188 CRIPAKQ8N1N5 446 aa27.42■■□□□ 1.98
PRDM4-202ENST00000547188 CDCA3Q99618 268 aaPredicted RBP27.42■■□□□ 1.98
PRDM4-202ENST00000547188 TCP11L1Q9NUJ3 509 aa27.42■■□□□ 1.98
PRDM4-202ENST00000547188 FGRP09769 529 aa27.41■■□□□ 1.98
PRDM4-202ENST00000547188 QRICH1Q2TAL8 776 aa27.41■■□□□ 1.98
PRDM4-202ENST00000547188 FBXO47Q5MNV8 452 aa27.41■■□□□ 1.98
PRDM4-202ENST00000547188 AGO3Q9H9G7 860 aaKnown RBP27.41■■□□□ 1.98
PRDM4-202ENST00000547188 MRPL11Q9Y3B7 192 aaKnown RBP27.41■■□□□ 1.98
PRDM4-202ENST00000547188 FNDC1Q4ZHG4 1894 aaPredicted RBP27.4■■□□□ 1.98
PRDM4-202ENST00000547188 NOP56O00567 594 aaKnown RBP27.4■■□□□ 1.98
PRDM4-202ENST00000547188 IBSPP21815 317 aaPredicted RBP27.4■■□□□ 1.98
PRDM4-202ENST00000547188 KCNC3Q14003 757 aa27.4■■□□□ 1.98
PRDM4-202ENST00000547188 GPATCH4Q5T3I0 446 aaKnown RBP27.4■■□□□ 1.98
PRDM4-202ENST00000547188 VPS53Q5VIR6 699 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms