RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 PLA2G4DQ86XP0 818 aa18.09■□□□□ 0.49
DDX54-204ENST00000546898 TRIM50Q86XT4 487 aa18.09■□□□□ 0.49
DDX54-204ENST00000546898 RASGRP4Q8TDF6 673 aa18.09■□□□□ 0.49
DDX54-204ENST00000546898 GTF3C6Q969F1 213 aa18.09■□□□□ 0.49
DDX54-204ENST00000546898 MYH9P35579 1960 aaKnown RBP18.09■□□□□ 0.49
DDX54-204ENST00000546898 TET1Q8NFU7 2136 aa18.08■□□□□ 0.49
DDX54-204ENST00000546898 GBF1Q92538 1859 aa18.08■□□□□ 0.49
DDX54-204ENST00000546898 GSTTP1A0A1W2PQM5 241 aa18.08■□□□□ 0.48
DDX54-204ENST00000546898 PARNO95453 639 aaKnown RBP18.08■□□□□ 0.48
DDX54-204ENST00000546898 FGBP02675 491 aa18.08■□□□□ 0.48
DDX54-204ENST00000546898 IQCF3P0C7M6 154 aa18.08■□□□□ 0.48
DDX54-204ENST00000546898 SMIM10L2AP0DMW4 78 aa18.08■□□□□ 0.48
DDX54-204ENST00000546898 SMIM10L2BP0DMW5 78 aa18.08■□□□□ 0.48
DDX54-204ENST00000546898 GNAT1P11488 350 aa18.08■□□□□ 0.48
DDX54-204ENST00000546898 CIITAP33076 1130 aa18.08■□□□□ 0.48
DDX54-204ENST00000546898 ITGB3BPQ13352 177 aaPredicted RBP18.08■□□□□ 0.48
DDX54-204ENST00000546898 ME3Q16798 604 aa18.08■□□□□ 0.48
DDX54-204ENST00000546898 BLIDQ8IZY5 108 aa18.08■□□□□ 0.48
DDX54-204ENST00000546898 HERVK_113Q902F9 699 aa18.08■□□□□ 0.48
DDX54-204ENST00000546898 WASF1Q92558 559 aa18.08■□□□□ 0.48
DDX54-204ENST00000546898 DHX38Q92620 1227 aaKnown RBP18.08■□□□□ 0.48
DDX54-204ENST00000546898 ERAP1Q9NZ08 941 aa18.08■□□□□ 0.48
DDX54-204ENST00000546898 TELO2Q9Y4R8 837 aa18.08■□□□□ 0.48
DDX54-204ENST00000546898 LGR5O75473 907 aa18.07■□□□□ 0.48
DDX54-204ENST00000546898 SELPP16109 830 aa18.07■□□□□ 0.48
DDX54-204ENST00000546898 FAM109BQ6ICB4 259 aaPredicted RBP18.07■□□□□ 0.48
DDX54-204ENST00000546898 SERINC5Q86VE9 423 aa18.07■□□□□ 0.48
DDX54-204ENST00000546898 AIFM3Q96NN9 605 aa18.07■□□□□ 0.48
DDX54-204ENST00000546898 RNPEPQ9H4A4 650 aa18.07■□□□□ 0.48
DDX54-204ENST00000546898 SMARCAD1Q9H4L7 1026 aa18.07■□□□□ 0.48
DDX54-204ENST00000546898 NRCAMQ92823 1304 aa18.06■□□□□ 0.48
DDX54-204ENST00000546898 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.06■□□□□ 0.48
DDX54-204ENST00000546898 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.06■□□□□ 0.48
DDX54-204ENST00000546898 M0R2N6 131 aa18.06■□□□□ 0.48
DDX54-204ENST00000546898 LARGE1O95461 756 aa18.06■□□□□ 0.48
DDX54-204ENST00000546898 CTDNEP1O95476 244 aa18.06■□□□□ 0.48
DDX54-204ENST00000546898 USP11P51784 963 aa18.06■□□□□ 0.48
DDX54-204ENST00000546898 ACTR2P61160 394 aa18.06■□□□□ 0.48
DDX54-204ENST00000546898 HIC1Q14526 733 aa18.06■□□□□ 0.48
DDX54-204ENST00000546898 TRIM71Q2Q1W2 868 aaKnown RBP18.06■□□□□ 0.48
DDX54-204ENST00000546898 LRRC8DQ7L1W4 858 aa18.06■□□□□ 0.48
DDX54-204ENST00000546898 ATP6V0A1Q93050 837 aa18.06■□□□□ 0.48
DDX54-204ENST00000546898 AZI2Q9H6S1 392 aa18.06■□□□□ 0.48
DDX54-204ENST00000546898 TBC1D22BQ9NU19 505 aa18.06■□□□□ 0.48
DDX54-204ENST00000546898 IPO5O00410 1097 aaKnown RBP18.05■□□□□ 0.48
DDX54-204ENST00000546898 CAND2O75155 1236 aa18.05■□□□□ 0.48
DDX54-204ENST00000546898 CKBP12277 381 aa18.05■□□□□ 0.48
DDX54-204ENST00000546898 ACTN1P12814 892 aa18.05■□□□□ 0.48
DDX54-204ENST00000546898 RBM25P49756 843 aaKnown RBP18.05■□□□□ 0.48
DDX54-204ENST00000546898 ZNF200P98182 395 aaPredicted RBP18.05■□□□□ 0.48
DDX54-204ENST00000546898 NPY5RQ15761 445 aa18.05■□□□□ 0.48
DDX54-204ENST00000546898 TBCKQ8TEA7 893 aa18.05■□□□□ 0.48
DDX54-204ENST00000546898 GLG1Q92896 1179 aa18.05■□□□□ 0.48
DDX54-204ENST00000546898 VWCEQ96DN2 955 aa18.05■□□□□ 0.48
DDX54-204ENST00000546898 ZNF577Q9BSK1 485 aa18.05■□□□□ 0.48
DDX54-204ENST00000546898 PHF20Q9BVI0 1012 aa18.05■□□□□ 0.48
DDX54-204ENST00000546898 ORC3Q9UBD5 711 aaPredicted RBP18.05■□□□□ 0.48
DDX54-204ENST00000546898 TMEM265A0A087WTH1 108 aa18.04■□□□□ 0.48
DDX54-204ENST00000546898 DHX15O43143 795 aaKnown RBP18.04■□□□□ 0.48
DDX54-204ENST00000546898 ATG7O95352 703 aa18.04■□□□□ 0.48
DDX54-204ENST00000546898 SLC26A2P50443 739 aa18.04■□□□□ 0.48
DDX54-204ENST00000546898 PRR16Q569H4 304 aa18.04■□□□□ 0.48
DDX54-204ENST00000546898 OTOP2Q7RTS6 562 aa18.04■□□□□ 0.48
DDX54-204ENST00000546898 PLPPR4Q7Z2D5 763 aa18.04■□□□□ 0.48
DDX54-204ENST00000546898 KRT25Q7Z3Z0 450 aa18.04■□□□□ 0.48
DDX54-204ENST00000546898 DEFB128Q7Z7B8 93 aa18.04■□□□□ 0.48
DDX54-204ENST00000546898 DEFB123Q8N688 67 aa18.04■□□□□ 0.48
DDX54-204ENST00000546898 NECAB1Q8N987 351 aa18.04■□□□□ 0.48
DDX54-204ENST00000546898 LMBR1Q8WVP7 490 aa18.04■□□□□ 0.48
DDX54-204ENST00000546898 TNPO1Q92973 898 aaKnown RBP18.04■□□□□ 0.48
DDX54-204ENST00000546898 SETD4Q9NVD3 440 aa18.04■□□□□ 0.48
DDX54-204ENST00000546898 TCEAL9Q9UHQ7 104 aa18.04■□□□□ 0.48
DDX54-204ENST00000546898 TREHO43280 583 aa18.03■□□□□ 0.48
DDX54-204ENST00000546898 ADAM17P78536 824 aa18.03■□□□□ 0.48
DDX54-204ENST00000546898 PPFIA1Q13136 1202 aa18.03■□□□□ 0.48
DDX54-204ENST00000546898 NONOQ15233 471 aaKnown RBP eCLIP18.03■□□□□ 0.48
DDX54-204ENST00000546898 ZNF697Q5TEC3 545 aa18.03■□□□□ 0.48
DDX54-204ENST00000546898 ZNF746Q6NUN9 644 aaPredicted RBP18.03■□□□□ 0.48
DDX54-204ENST00000546898 MOXD1Q6UVY6 613 aa18.03■□□□□ 0.48
DDX54-204ENST00000546898 NSUN7Q8NE18 718 aaKnown RBP18.03■□□□□ 0.48
DDX54-204ENST00000546898 WNT8BQ93098 351 aa18.03■□□□□ 0.48
DDX54-204ENST00000546898 LENG9Q96B70 501 aa18.03■□□□□ 0.48
DDX54-204ENST00000546898 PCYT2Q99447 389 aa18.03■□□□□ 0.48
DDX54-204ENST00000546898 KIF2CQ99661 725 aa18.03■□□□□ 0.48
DDX54-204ENST00000546898 UPF2Q9HAU5 1272 aaKnown RBP18.03■□□□□ 0.48
DDX54-204ENST00000546898 KCNJ14Q9UNX9 436 aa18.03■□□□□ 0.48
DDX54-204ENST00000546898 LIMCH1Q9UPQ0 1083 aa18.03■□□□□ 0.48
DDX54-204ENST00000546898 SIP14410 1827 aa18.02■□□□□ 0.48
DDX54-204ENST00000546898 PTPRSQ13332 1948 aa18.02■□□□□ 0.48
DDX54-204ENST00000546898 IGKV6D-21A0A0A0MT36 114 aa18.02■□□□□ 0.48
DDX54-204ENST00000546898 DDX39AO00148 427 aaKnown RBP18.02■□□□□ 0.48
DDX54-204ENST00000546898 BAIAP3O94812 1187 aa18.02■□□□□ 0.48
DDX54-204ENST00000546898 CCNE2O96020 404 aa18.02■□□□□ 0.48
DDX54-204ENST00000546898 CXCL10P02778 98 aa18.02■□□□□ 0.48
DDX54-204ENST00000546898 FDPSP14324 419 aaKnown RBP18.02■□□□□ 0.48
DDX54-204ENST00000546898 MARK3P27448 753 aa18.02■□□□□ 0.48
DDX54-204ENST00000546898 STAT5BP51692 787 aa18.02■□□□□ 0.48
DDX54-204ENST00000546898 KRT76Q01546 638 aa18.02■□□□□ 0.48
DDX54-204ENST00000546898 ZNF618Q5T7W0 954 aa18.02■□□□□ 0.48
DDX54-204ENST00000546898 FAM160B1Q5W0V3 765 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms