RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 SUGP1Q8IWZ8 645 aaKnown RBP20.78■□□□□ 0.92
MSLN-202ENST00000545450 SPATA4Q8NEY3 305 aa20.78■□□□□ 0.92
MSLN-202ENST00000545450 P2RX5Q93086 422 aa20.78■□□□□ 0.92
MSLN-202ENST00000545450 BICDL2A1A5D9 508 aa20.77■□□□□ 0.92
MSLN-202ENST00000545450 EBAG9O00559 213 aa20.77■□□□□ 0.92
MSLN-202ENST00000545450 TBC1D12O60347 775 aa20.77■□□□□ 0.92
MSLN-202ENST00000545450 TACC1O75410 805 aa20.77■□□□□ 0.92
MSLN-202ENST00000545450 UBA7P41226 1012 aa20.77■□□□□ 0.92
MSLN-202ENST00000545450 SAMD7Q7Z3H4 446 aa20.77■□□□□ 0.92
MSLN-202ENST00000545450 FAM114A1Q8IWE2 563 aa20.77■□□□□ 0.92
MSLN-202ENST00000545450 CNOT6LQ96LI5 555 aaKnown RBP20.77■□□□□ 0.92
MSLN-202ENST00000545450 CCDC42Q96M95 316 aa20.77■□□□□ 0.92
MSLN-202ENST00000545450 ZBTB5O15062 677 aa20.76■□□□□ 0.91
MSLN-202ENST00000545450 OPA1O60313 960 aa20.76■□□□□ 0.91
MSLN-202ENST00000545450 USO1O60763 962 aaKnown RBP20.76■□□□□ 0.91
MSLN-202ENST00000545450 SKIDA1Q1XH10 827 aa20.76■□□□□ 0.91
MSLN-202ENST00000545450 ANKRD40Q6AI12 368 aa20.76■□□□□ 0.91
MSLN-202ENST00000545450 RASSF8Q8NHQ8 419 aa20.76■□□□□ 0.91
MSLN-202ENST00000545450 IQCDQ96DY2 449 aa20.76■□□□□ 0.91
MSLN-202ENST00000545450 SH2D4AQ9H788 454 aa20.76■□□□□ 0.91
MSLN-202ENST00000545450 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.76■□□□□ 0.91
MSLN-202ENST00000545450 ZBTB21Q9ULJ3 1066 aa20.76■□□□□ 0.91
MSLN-202ENST00000545450 CAPN6Q9Y6Q1 641 aa20.76■□□□□ 0.91
MSLN-202ENST00000545450 SBF1O95248 1867 aa20.76■□□□□ 0.91
MSLN-202ENST00000545450 ASTN2O75129 1339 aaPredicted RBP20.76■□□□□ 0.91
MSLN-202ENST00000545450 ECE1P42892 770 aa20.76■□□□□ 0.91
MSLN-202ENST00000545450 MMP14P50281 582 aa20.76■□□□□ 0.91
MSLN-202ENST00000545450 RASA3Q14644 834 aa20.76■□□□□ 0.91
MSLN-202ENST00000545450 KRT26Q7Z3Y9 468 aa20.76■□□□□ 0.91
MSLN-202ENST00000545450 LRRC15Q8TF66 581 aa20.76■□□□□ 0.91
MSLN-202ENST00000545450 TMEM60Q9H2L4 133 aa20.76■□□□□ 0.91
MSLN-202ENST00000545450 CNOT7Q9UIV1 285 aaKnown RBP20.76■□□□□ 0.91
MSLN-202ENST00000545450 PLAGL2Q9UPG8 496 aa20.76■□□□□ 0.91
MSLN-202ENST00000545450 FAM169AQ9Y6X4 670 aa20.76■□□□□ 0.91
MSLN-202ENST00000545450 ALS2CLQ60I27 953 aa20.75■□□□□ 0.91
MSLN-202ENST00000545450 MMS22LQ6ZRQ5 1243 aa20.75■□□□□ 0.91
MSLN-202ENST00000545450 KRT25Q7Z3Z0 450 aa20.75■□□□□ 0.91
MSLN-202ENST00000545450 REXO1Q8N1G1 1221 aaKnown RBP20.75■□□□□ 0.91
MSLN-202ENST00000545450 MICALL1Q8N3F8 863 aa20.75■□□□□ 0.91
MSLN-202ENST00000545450 BCAS4Q8TDM0 211 aa20.75■□□□□ 0.91
MSLN-202ENST00000545450 SMCR8Q8TEV9 937 aaPredicted RBP20.75■□□□□ 0.91
MSLN-202ENST00000545450 GMCL1Q96IK5 515 aa20.75■□□□□ 0.91
MSLN-202ENST00000545450 NOC4LQ9BVI4 516 aaKnown RBP20.75■□□□□ 0.91
MSLN-202ENST00000545450 CUEDC2Q9H467 287 aa20.75■□□□□ 0.91
MSLN-202ENST00000545450 MAGEF1Q9HAY2 307 aa20.75■□□□□ 0.91
MSLN-202ENST00000545450 TMEM260Q9NX78 707 aa20.75■□□□□ 0.91
MSLN-202ENST00000545450 BIN2Q9UBW5 565 aaPredicted RBP20.75■□□□□ 0.91
MSLN-202ENST00000545450 PCDHA13Q9Y5I0 950 aa20.75■□□□□ 0.91
MSLN-202ENST00000545450 LCA5LO95447 670 aa20.75■□□□□ 0.91
MSLN-202ENST00000545450 TCP1P17987 556 aaKnown RBP20.75■□□□□ 0.91
MSLN-202ENST00000545450 EPHB4P54760 987 aa20.75■□□□□ 0.91
MSLN-202ENST00000545450 TBC1D10BQ4KMP7 808 aaPredicted RBP20.75■□□□□ 0.91
MSLN-202ENST00000545450 EMBQ6PCB8 327 aa20.75■□□□□ 0.91
MSLN-202ENST00000545450 ACER1Q8TDN7 264 aa20.75■□□□□ 0.91
MSLN-202ENST00000545450 EEF2KMTQ96G04 330 aa20.75■□□□□ 0.91
MSLN-202ENST00000545450 PCMTD1Q96MG8 357 aaPredicted RBP20.75■□□□□ 0.91
MSLN-202ENST00000545450 OSBPL9Q96SU4 736 aa20.75■□□□□ 0.91
MSLN-202ENST00000545450 HINFPQ9BQA5 517 aa20.75■□□□□ 0.91
MSLN-202ENST00000545450 IFIH1Q9BYX4 1025 aaKnown RBP20.75■□□□□ 0.91
MSLN-202ENST00000545450 SPON1Q9HCB6 807 aa20.75■□□□□ 0.91
MSLN-202ENST00000545450 PLEKP08567 350 aaPredicted RBP20.74■□□□□ 0.91
MSLN-202ENST00000545450 TNFRSF8P28908 595 aa20.74■□□□□ 0.91
MSLN-202ENST00000545450 MTIF2P46199 727 aaKnown RBP20.74■□□□□ 0.91
MSLN-202ENST00000545450 ADCY7P51828 1080 aa20.74■□□□□ 0.91
MSLN-202ENST00000545450 GNGT1P63211 74 aa20.74■□□□□ 0.91
MSLN-202ENST00000545450 SKOR1P84550 965 aa20.74■□□□□ 0.91
MSLN-202ENST00000545450 MAP3K10Q02779 954 aa20.74■□□□□ 0.91
MSLN-202ENST00000545450 NONOQ15233 471 aaKnown RBP eCLIP20.74■□□□□ 0.91
MSLN-202ENST00000545450 CAVIN3Q969G5 261 aa20.74■□□□□ 0.91
MSLN-202ENST00000545450 TEPSINQ96N21 525 aa20.74■□□□□ 0.91
MSLN-202ENST00000545450 ARHGAP20Q9P2F6 1191 aa20.74■□□□□ 0.91
MSLN-202ENST00000545450 A6NNZ2 444 aa20.73■□□□□ 0.91
MSLN-202ENST00000545450 ERLIN2O94905 339 aa20.73■□□□□ 0.91
MSLN-202ENST00000545450 PPP1R2P41236 205 aa20.73■□□□□ 0.91
MSLN-202ENST00000545450 TNNI2P48788 182 aa20.73■□□□□ 0.91
MSLN-202ENST00000545450 QRICH1Q2TAL8 776 aa20.73■□□□□ 0.91
MSLN-202ENST00000545450 TUBB8Q3ZCM7 444 aa20.73■□□□□ 0.91
MSLN-202ENST00000545450 KIAA1755Q5JYT7 1200 aa20.73■□□□□ 0.91
MSLN-202ENST00000545450 PPP1R18Q6NYC8 613 aa20.73■□□□□ 0.91
MSLN-202ENST00000545450 PLIN2Q99541 437 aa20.73■□□□□ 0.91
MSLN-202ENST00000545450 MLXIPQ9HAP2 919 aa20.73■□□□□ 0.91
MSLN-202ENST00000545450 MYH7BA7E2Y1 1941 aa20.73■□□□□ 0.91
MSLN-202ENST00000545450 PRPHP41219 470 aa20.73■□□□□ 0.91
MSLN-202ENST00000545450 FKBP15Q5T1M5 1219 aa20.73■□□□□ 0.91
MSLN-202ENST00000545450 SPICE1Q8N0Z3 855 aa20.73■□□□□ 0.91
MSLN-202ENST00000545450 STIM2Q9P246 746 aa20.73■□□□□ 0.91
MSLN-202ENST00000545450 HYOU1Q9Y4L1 999 aa20.73■□□□□ 0.91
MSLN-202ENST00000545450 LAD1O00515 517 aa20.72■□□□□ 0.91
MSLN-202ENST00000545450 MOCS3O95396 460 aa20.72■□□□□ 0.91
MSLN-202ENST00000545450 CAP2P40123 477 aa20.72■□□□□ 0.91
MSLN-202ENST00000545450 STK4Q13043 487 aa20.72■□□□□ 0.91
MSLN-202ENST00000545450 CDC37Q16543 378 aaPredicted RBP20.72■□□□□ 0.91
MSLN-202ENST00000545450 HAUS3Q68CZ6 603 aa20.72■□□□□ 0.91
MSLN-202ENST00000545450 TSEN2Q8NCE0 465 aaKnown RBP20.72■□□□□ 0.91
MSLN-202ENST00000545450 CCDC47Q96A33 483 aaKnown RBP20.72■□□□□ 0.91
MSLN-202ENST00000545450 TRIM9Q9C026 710 aa20.72■□□□□ 0.91
MSLN-202ENST00000545450 ARHGEF10LQ9HCE6 1279 aa20.72■□□□□ 0.91
MSLN-202ENST00000545450 SYNPO2Q9UMS6 1093 aa20.72■□□□□ 0.91
MSLN-202ENST00000545450 SMCHD1A6NHR9 2005 aa20.72■□□□□ 0.91
MSLN-202ENST00000545450 BMP3P12645 472 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms