RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 SUPT16HQ9Y5B9 1047 aaKnown RBP13.34□□□□□ -0.27
TMEM258-208ENST00000545210 CHRNA1P02708 482 aa13.33□□□□□ -0.28
TMEM258-208ENST00000545210 GHRP10912 638 aa13.33□□□□□ -0.28
TMEM258-208ENST00000545210 ARHGAP4P98171 946 aa13.33□□□□□ -0.28
TMEM258-208ENST00000545210 ADAM15Q13444 863 aa13.33□□□□□ -0.28
TMEM258-208ENST00000545210 CYFIP1Q7L576 1253 aa13.33□□□□□ -0.28
TMEM258-208ENST00000545210 LMBR1Q8WVP7 490 aa13.33□□□□□ -0.28
TMEM258-208ENST00000545210 CLP1Q92989 425 aaKnown RBP13.33□□□□□ -0.28
TMEM258-208ENST00000545210 PBXIP1Q96AQ6 731 aa13.33□□□□□ -0.28
TMEM258-208ENST00000545210 MTMR8Q96EF0 704 aa13.33□□□□□ -0.28
TMEM258-208ENST00000545210 GPR20Q99678 358 aa13.33□□□□□ -0.28
TMEM258-208ENST00000545210 RC3H2Q9HBD1 1191 aaKnown RBP13.33□□□□□ -0.28
TMEM258-208ENST00000545210 TELO2Q9Y4R8 837 aa13.33□□□□□ -0.28
TMEM258-208ENST00000545210 GCOM1H8Y6P7 765 aaPredicted RBP13.32□□□□□ -0.28
TMEM258-208ENST00000545210 MMP1P03956 469 aa13.32□□□□□ -0.28
TMEM258-208ENST00000545210 POLR2MP0CAP2 368 aa13.32□□□□□ -0.28
TMEM258-208ENST00000545210 SDSP20132 328 aa13.32□□□□□ -0.28
TMEM258-208ENST00000545210 NDUFV1P49821 464 aa13.32□□□□□ -0.28
TMEM258-208ENST00000545210 NT5C2P49902 561 aa13.32□□□□□ -0.28
TMEM258-208ENST00000545210 ADAM17P78536 824 aa13.32□□□□□ -0.28
TMEM258-208ENST00000545210 MRPS9P82933 396 aaKnown RBP13.32□□□□□ -0.28
TMEM258-208ENST00000545210 CAMK1Q14012 370 aa13.32□□□□□ -0.28
TMEM258-208ENST00000545210 BTG3Q14201 252 aaPredicted RBP13.32□□□□□ -0.28
TMEM258-208ENST00000545210 IFIT1BQ5T764 474 aaKnown RBP13.32□□□□□ -0.28
TMEM258-208ENST00000545210 UTP14CQ5TAP6 766 aaKnown RBP13.32□□□□□ -0.28
TMEM258-208ENST00000545210 METTL7BQ6UX53 244 aa13.32□□□□□ -0.28
TMEM258-208ENST00000545210 RUFY4Q6ZNE9 571 aa13.32□□□□□ -0.28
TMEM258-208ENST00000545210 HOMER1Q86YM7 354 aa13.32□□□□□ -0.28
TMEM258-208ENST00000545210 SAMD3Q8N6K7 520 aa13.32□□□□□ -0.28
TMEM258-208ENST00000545210 UBAC1Q9BSL1 405 aa13.32□□□□□ -0.28
TMEM258-208ENST00000545210 MAD2L2Q9UI95 211 aa13.32□□□□□ -0.28
TMEM258-208ENST00000545210 ZNF215Q9UL58 517 aaPredicted RBP13.32□□□□□ -0.28
TMEM258-208ENST00000545210 FNDC1Q4ZHG4 1894 aaPredicted RBP13.31□□□□□ -0.28
TMEM258-208ENST00000545210 TMEM221A6NGB7 291 aa13.31□□□□□ -0.28
TMEM258-208ENST00000545210 SPATA31C2B4DYI2 1134 aa13.31□□□□□ -0.28
TMEM258-208ENST00000545210 M0R296 226 aa13.31□□□□□ -0.28
TMEM258-208ENST00000545210 ENPP3O14638 875 aa13.31□□□□□ -0.28
TMEM258-208ENST00000545210 PTPN5P54829 565 aa13.31□□□□□ -0.28
TMEM258-208ENST00000545210 SP4Q02446 784 aa13.31□□□□□ -0.28
TMEM258-208ENST00000545210 NEDD9Q14511 834 aa13.31□□□□□ -0.28
TMEM258-208ENST00000545210 LPIN1Q14693 890 aa13.31□□□□□ -0.28
TMEM258-208ENST00000545210 GNPTABQ3T906 1256 aa13.31□□□□□ -0.28
TMEM258-208ENST00000545210 CWC27Q6UX04 472 aaKnown RBP13.31□□□□□ -0.28
TMEM258-208ENST00000545210 TRIM67Q6ZTA4 783 aa13.31□□□□□ -0.28
TMEM258-208ENST00000545210 BMP8AQ7Z5Y6 402 aa13.31□□□□□ -0.28
TMEM258-208ENST00000545210 ZNF689Q96CS4 500 aaPredicted RBP13.31□□□□□ -0.28
TMEM258-208ENST00000545210 MSLNLQ96KJ4 702 aa13.31□□□□□ -0.28
TMEM258-208ENST00000545210 INPP4AQ96PE3 977 aaPredicted RBP13.31□□□□□ -0.28
TMEM258-208ENST00000545210 EHMT1Q9H9B1 1298 aa13.31□□□□□ -0.28
TMEM258-208ENST00000545210 RTEL1Q9NZ71 1219 aa13.31□□□□□ -0.28
TMEM258-208ENST00000545210 PLAGL2Q9UPG8 496 aa13.31□□□□□ -0.28
TMEM258-208ENST00000545210 PALM3A6NDB9 673 aaPredicted RBP13.3□□□□□ -0.28
TMEM258-208ENST00000545210 DGKIO75912 1065 aa13.3□□□□□ -0.28
TMEM258-208ENST00000545210 DNAJB1P25685 340 aa13.3□□□□□ -0.28
TMEM258-208ENST00000545210 ICAM3P32942 547 aa13.3□□□□□ -0.28
TMEM258-208ENST00000545210 SEMA3FQ13275 785 aa13.3□□□□□ -0.28
TMEM258-208ENST00000545210 SLC35G1Q2M3R5 365 aa13.3□□□□□ -0.28
TMEM258-208ENST00000545210 ADGRD2Q7Z7M1 963 aa13.3□□□□□ -0.28
TMEM258-208ENST00000545210 PIGSQ96S52 555 aa13.3□□□□□ -0.28
TMEM258-208ENST00000545210 PLVAPQ9BX97 442 aa13.3□□□□□ -0.28
TMEM258-208ENST00000545210 KRT23Q9C075 422 aa13.3□□□□□ -0.28
TMEM258-208ENST00000545210 CLEC1BQ9P126 229 aa13.3□□□□□ -0.28
TMEM258-208ENST00000545210 NRCAMQ92823 1304 aa13.3□□□□□ -0.28
TMEM258-208ENST00000545210 PLXNA3P51805 1871 aa13.29□□□□□ -0.28
TMEM258-208ENST00000545210 FIBPO43427 364 aa13.29□□□□□ -0.28
TMEM258-208ENST00000545210 ST18O60284 1047 aa13.29□□□□□ -0.28
TMEM258-208ENST00000545210 STAM2O75886 525 aa13.29□□□□□ -0.28
TMEM258-208ENST00000545210 EYA4O95677 639 aa13.29□□□□□ -0.28
TMEM258-208ENST00000545210 ITGB1P05556 798 aa13.29□□□□□ -0.28
TMEM258-208ENST00000545210 RRP1P56182 461 aaKnown RBP13.29□□□□□ -0.28
TMEM258-208ENST00000545210 ZXDAP98168 799 aa13.29□□□□□ -0.28
TMEM258-208ENST00000545210 MGAT3Q09327 533 aa13.29□□□□□ -0.28
TMEM258-208ENST00000545210 TCF15Q12870 199 aa13.29□□□□□ -0.28
TMEM258-208ENST00000545210 SEC23AQ15436 765 aa13.29□□□□□ -0.28
TMEM258-208ENST00000545210 IMMTQ16891 758 aaKnown RBP13.29□□□□□ -0.28
TMEM258-208ENST00000545210 SUGP1Q8IWZ8 645 aaKnown RBP13.29□□□□□ -0.28
TMEM258-208ENST00000545210 SMRP1Q8NCR6 262 aa13.29□□□□□ -0.28
TMEM258-208ENST00000545210 P2RX5Q93086 422 aa13.29□□□□□ -0.28
TMEM258-208ENST00000545210 CNNM2Q9H8M5 875 aa13.29□□□□□ -0.28
TMEM258-208ENST00000545210 MRPL42Q9Y6G3 142 aaKnown RBP13.29□□□□□ -0.28
TMEM258-208ENST00000545210 FRMPD4Q14CM0 1322 aa13.29□□□□□ -0.28
TMEM258-208ENST00000545210 LOC730098B7Z3J9 87 aa13.28□□□□□ -0.28
TMEM258-208ENST00000545210 NRIP1P48552 1158 aa13.28□□□□□ -0.28
TMEM258-208ENST00000545210 COASYQ13057 564 aa13.28□□□□□ -0.28
TMEM258-208ENST00000545210 TRAF1Q13077 416 aa13.28□□□□□ -0.28
TMEM258-208ENST00000545210 FBXO47Q5MNV8 452 aa13.28□□□□□ -0.28
TMEM258-208ENST00000545210 TAF2Q6P1X5 1199 aa13.28□□□□□ -0.28
TMEM258-208ENST00000545210 RBM23Q86U06 439 aaKnown RBP13.28□□□□□ -0.28
TMEM258-208ENST00000545210 RSPH3Q86UC2 560 aa13.28□□□□□ -0.28
TMEM258-208ENST00000545210 FBXL6Q8N531 539 aa13.28□□□□□ -0.28
TMEM258-208ENST00000545210 EFHBQ8N7U6 833 aa13.28□□□□□ -0.28
TMEM258-208ENST00000545210 SPPL3Q8TCT6 385 aa13.28□□□□□ -0.28
TMEM258-208ENST00000545210 DNAJB3Q8WWF6 145 aa13.28□□□□□ -0.28
TMEM258-208ENST00000545210 LINC01599Q8WXQ3 324 aa13.28□□□□□ -0.28
TMEM258-208ENST00000545210 PPP2R3CQ969Q6 453 aa13.28□□□□□ -0.28
TMEM258-208ENST00000545210 PRRX2Q99811 253 aa13.28□□□□□ -0.28
TMEM258-208ENST00000545210 LNPKQ9C0E8 428 aa13.28□□□□□ -0.28
TMEM258-208ENST00000545210 RIOX1Q9H6W3 641 aa13.28□□□□□ -0.28
TMEM258-208ENST00000545210 DIAPH3Q9NSV4 1193 aa13.28□□□□□ -0.28
TMEM258-208ENST00000545210 BARX2Q9UMQ3 279 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms