RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 ORC3Q9UBD5 711 aaPredicted RBP17.88■□□□□ 0.45
CCDC78-216ENST00000544996 TELO2Q9Y4R8 837 aa17.88■□□□□ 0.45
CCDC78-216ENST00000544996 IPO5O00410 1097 aaKnown RBP17.87■□□□□ 0.45
CCDC78-216ENST00000544996 CTDNEP1O95476 244 aa17.87■□□□□ 0.45
CCDC78-216ENST00000544996 PFKMP08237 780 aa17.87■□□□□ 0.45
CCDC78-216ENST00000544996 IQCF3P0C7M6 154 aa17.87■□□□□ 0.45
CCDC78-216ENST00000544996 CIITAP33076 1130 aa17.87■□□□□ 0.45
CCDC78-216ENST00000544996 PRR16Q569H4 304 aa17.87■□□□□ 0.45
CCDC78-216ENST00000544996 ZNF365Q70YC5 407 aa17.87■□□□□ 0.45
CCDC78-216ENST00000544996 AFAP1L1Q8TED9 768 aa17.87■□□□□ 0.45
CCDC78-216ENST00000544996 ATP6V0A1Q93050 837 aa17.87■□□□□ 0.45
CCDC78-216ENST00000544996 ZNF577Q9BSK1 485 aa17.87■□□□□ 0.45
CCDC78-216ENST00000544996 ERAP1Q9NZ08 941 aa17.87■□□□□ 0.45
CCDC78-216ENST00000544996 TCEAL9Q9UHQ7 104 aa17.87■□□□□ 0.45
CCDC78-216ENST00000544996 LIMCH1Q9UPQ0 1083 aa17.87■□□□□ 0.45
CCDC78-216ENST00000544996 IGLV3-22A0A075B6J6 115 aa17.86■□□□□ 0.45
CCDC78-216ENST00000544996 PARNO95453 639 aaKnown RBP17.86■□□□□ 0.45
CCDC78-216ENST00000544996 LARGE1O95461 756 aa17.86■□□□□ 0.45
CCDC78-216ENST00000544996 RBM25P49756 843 aaKnown RBP17.86■□□□□ 0.45
CCDC78-216ENST00000544996 ACTR2P61160 394 aa17.86■□□□□ 0.45
CCDC78-216ENST00000544996 ZNF200P98182 395 aaPredicted RBP17.86■□□□□ 0.45
CCDC78-216ENST00000544996 ITGB3BPQ13352 177 aaPredicted RBP17.86■□□□□ 0.45
CCDC78-216ENST00000544996 TBCKQ8TEA7 893 aa17.86■□□□□ 0.45
CCDC78-216ENST00000544996 TNPO1Q92973 898 aaKnown RBP17.86■□□□□ 0.45
CCDC78-216ENST00000544996 CTAGE1Q96RT6 745 aa17.86■□□□□ 0.45
CCDC78-216ENST00000544996 RNPEPQ9H4A4 650 aa17.86■□□□□ 0.45
CCDC78-216ENST00000544996 TBC1D22BQ9NU19 505 aa17.86■□□□□ 0.45
CCDC78-216ENST00000544996 KCNJ14Q9UNX9 436 aa17.86■□□□□ 0.45
CCDC78-216ENST00000544996 MYH7BA7E2Y1 1941 aa17.86■□□□□ 0.45
CCDC78-216ENST00000544996 SELPP16109 830 aa17.85■□□□□ 0.45
CCDC78-216ENST00000544996 SMAD3P84022 425 aaKnown RBP17.85■□□□□ 0.45
CCDC78-216ENST00000544996 RBL2Q08999 1139 aa17.85■□□□□ 0.45
CCDC78-216ENST00000544996 KRT25Q7Z3Z0 450 aa17.85■□□□□ 0.45
CCDC78-216ENST00000544996 EMSYQ7Z589 1322 aa17.85■□□□□ 0.45
CCDC78-216ENST00000544996 DEFB128Q7Z7B8 93 aa17.85■□□□□ 0.45
CCDC78-216ENST00000544996 SERINC5Q86VE9 423 aa17.85■□□□□ 0.45
CCDC78-216ENST00000544996 HERVK_113Q902F9 699 aa17.85■□□□□ 0.45
CCDC78-216ENST00000544996 NRCAMQ92823 1304 aa17.85■□□□□ 0.45
CCDC78-216ENST00000544996 PHF20Q9BVI0 1012 aa17.85■□□□□ 0.45
CCDC78-216ENST00000544996 SETD4Q9NVD3 440 aa17.85■□□□□ 0.45
CCDC78-216ENST00000544996 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.84■□□□□ 0.45
CCDC78-216ENST00000544996 CCDC194A0A1B0GVG4 234 aa17.84■□□□□ 0.45
CCDC78-216ENST00000544996 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.84■□□□□ 0.45
CCDC78-216ENST00000544996 DDX39AO00148 427 aaKnown RBP17.84■□□□□ 0.45
CCDC78-216ENST00000544996 CKBP12277 381 aa17.84■□□□□ 0.45
CCDC78-216ENST00000544996 ACTN1P12814 892 aa17.84■□□□□ 0.45
CCDC78-216ENST00000544996 MARK3P27448 753 aa17.84■□□□□ 0.45
CCDC78-216ENST00000544996 HOXC8P31273 242 aa17.84■□□□□ 0.45
CCDC78-216ENST00000544996 HIC1Q14526 733 aa17.84■□□□□ 0.45
CCDC78-216ENST00000544996 NONOQ15233 471 aaKnown RBP eCLIP17.84■□□□□ 0.45
CCDC78-216ENST00000544996 LRRC8DQ7L1W4 858 aa17.84■□□□□ 0.45
CCDC78-216ENST00000544996 OTOP2Q7RTS6 562 aa17.84■□□□□ 0.45
CCDC78-216ENST00000544996 NSUN7Q8NE18 718 aaKnown RBP17.84■□□□□ 0.45
CCDC78-216ENST00000544996 DHX38Q92620 1227 aaKnown RBP17.84■□□□□ 0.45
CCDC78-216ENST00000544996 ZSCAN31Q96LW9 406 aaPredicted RBP17.84■□□□□ 0.45
CCDC78-216ENST00000544996 KIF2CQ99661 725 aa17.84■□□□□ 0.45
CCDC78-216ENST00000544996 FTOQ9C0B1 505 aaKnown RBP eCLIP17.84■□□□□ 0.45
CCDC78-216ENST00000544996 BRMS1Q9HCU9 246 aa17.84■□□□□ 0.45
CCDC78-216ENST00000544996 M0R2N6 131 aa17.83■□□□□ 0.44
CCDC78-216ENST00000544996 BACH1O14867 736 aa17.83■□□□□ 0.44
CCDC78-216ENST00000544996 LGR5O75473 907 aa17.83■□□□□ 0.44
CCDC78-216ENST00000544996 THPOP40225 353 aa17.83■□□□□ 0.44
CCDC78-216ENST00000544996 STAT5BP51692 787 aa17.83■□□□□ 0.44
CCDC78-216ENST00000544996 PPFIA1Q13136 1202 aa17.83■□□□□ 0.44
CCDC78-216ENST00000544996 RABEP1Q15276 862 aa17.83■□□□□ 0.44
CCDC78-216ENST00000544996 NPY5RQ15761 445 aa17.83■□□□□ 0.44
CCDC78-216ENST00000544996 RASIP1Q5U651 963 aa17.83■□□□□ 0.44
CCDC78-216ENST00000544996 MIS18BP1Q6P0N0 1132 aa17.83■□□□□ 0.44
CCDC78-216ENST00000544996 PLPPR4Q7Z2D5 763 aa17.83■□□□□ 0.44
CCDC78-216ENST00000544996 IL27Q8NEV9 243 aa17.83■□□□□ 0.44
CCDC78-216ENST00000544996 DHX15O43143 795 aaKnown RBP17.82■□□□□ 0.44
CCDC78-216ENST00000544996 TREHO43280 583 aa17.82■□□□□ 0.44
CCDC78-216ENST00000544996 DTNBO60941 627 aa17.82■□□□□ 0.44
CCDC78-216ENST00000544996 ATG7O95352 703 aa17.82■□□□□ 0.44
CCDC78-216ENST00000544996 CCNE2O96020 404 aa17.82■□□□□ 0.44
CCDC78-216ENST00000544996 FDPSP14324 419 aaKnown RBP17.82■□□□□ 0.44
CCDC78-216ENST00000544996 SLC26A2P50443 739 aa17.82■□□□□ 0.44
CCDC78-216ENST00000544996 KRT76Q01546 638 aa17.82■□□□□ 0.44
CCDC78-216ENST00000544996 TRIM29Q14134 588 aa17.82■□□□□ 0.44
CCDC78-216ENST00000544996 FAM160B1Q5W0V3 765 aa17.82■□□□□ 0.44
CCDC78-216ENST00000544996 ZNF746Q6NUN9 644 aaPredicted RBP17.82■□□□□ 0.44
CCDC78-216ENST00000544996 SMAP1Q8IYB5 467 aaPredicted RBP17.82■□□□□ 0.44
CCDC78-216ENST00000544996 LMBR1Q8WVP7 490 aa17.82■□□□□ 0.44
CCDC78-216ENST00000544996 LENG9Q96B70 501 aa17.82■□□□□ 0.44
CCDC78-216ENST00000544996 UIMC1Q96RL1 719 aa17.82■□□□□ 0.44
CCDC78-216ENST00000544996 PCYT2Q99447 389 aa17.82■□□□□ 0.44
CCDC78-216ENST00000544996 SH2B1Q9NRF2 756 aaPredicted RBP17.82■□□□□ 0.44
CCDC78-216ENST00000544996 TRPC6Q9Y210 931 aa17.82■□□□□ 0.44
CCDC78-216ENST00000544996 CYP3A7-CYP3A51PA0A087WV96 503 aa17.81■□□□□ 0.44
CCDC78-216ENST00000544996 RRN3P2A6NIE6 340 aa17.81■□□□□ 0.44
CCDC78-216ENST00000544996 ZBBXA8MT70 800 aa17.81■□□□□ 0.44
CCDC78-216ENST00000544996 ST18O60284 1047 aa17.81■□□□□ 0.44
CCDC78-216ENST00000544996 CAND2O75155 1236 aa17.81■□□□□ 0.44
CCDC78-216ENST00000544996 CYP3A7P24462 503 aa17.81■□□□□ 0.44
CCDC78-216ENST00000544996 GRIK4Q16099 956 aa17.81■□□□□ 0.44
CCDC78-216ENST00000544996 INF2Q27J81 1249 aa17.81■□□□□ 0.44
CCDC78-216ENST00000544996 TRIM71Q2Q1W2 868 aaKnown RBP17.81■□□□□ 0.44
CCDC78-216ENST00000544996 Q4G0T1 1027 aa17.81■□□□□ 0.44
CCDC78-216ENST00000544996 ZNF618Q5T7W0 954 aa17.81■□□□□ 0.44
CCDC78-216ENST00000544996 FAM109BQ6ICB4 259 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms