RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 CRYBG1Q9Y4K1 1723 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 NDUFAB1O14561 156 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 ABCB4P21439 1286 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 CTNNA1P35221 906 aaKnown RBP6.32□□□□□ -1.4
VPS50-220ENST00000544910 FXR2P51116 673 aaKnown RBP eCLIP6.32□□□□□ -1.4
VPS50-220ENST00000544910 USP14P54578 494 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 RDH13Q8NBN7 331 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 CCDC77Q9BR77 488 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 TRIM31Q9BZY9 425 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 TRIM7Q9C029 511 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 PICK1Q9NRD5 415 aa6.32□□□□□ -1.4
VPS50-220ENST00000544910 GPR75-ASB3A0A0A6YYF3 556 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 BACH1O14867 736 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 CLIC2O15247 247 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 HEXIM1O94992 359 aaKnown RBP6.31□□□□□ -1.4
VPS50-220ENST00000544910 PPP2R5EQ16537 467 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 GLE1Q53GS7 698 aaKnown RBP6.31□□□□□ -1.4
VPS50-220ENST00000544910 ARHGEF16Q5VV41 709 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 AP1ARQ63HQ0 302 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 RCSD1Q6JBY9 416 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 OTUD6AQ7L8S5 288 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 CROCCP2Q86T23 111 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 NLRX1Q86UT6 975 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 MIPOL1Q8TD10 442 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 NACC1Q96RE7 527 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 WDR11Q9BZH6 1224 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 VCXQ9H320 206 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 CCPG1Q9ULG6 757 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 A0A1W2PRG0 241 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 POTEB3A0JP26 581 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 POTECB2RU33 542 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 PSMD14O00487 310 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 FOXP2O15409 715 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 ECE2O60344 883 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 PRPF6O94906 941 aaKnown RBP6.31□□□□□ -1.4
VPS50-220ENST00000544910 PDHBP11177 359 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 HOXA13P31271 388 aaPredicted RBP6.31□□□□□ -1.4
VPS50-220ENST00000544910 GBP1P32455 592 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 ACTN2P35609 894 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 USP11P51784 963 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 UBXN2AP68543 259 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 SP4Q02446 784 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 SETDB1Q15047 1291 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 NAALADL2Q58DX5 795 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 EARS2Q5JPH6 523 aaKnown RBP6.31□□□□□ -1.4
VPS50-220ENST00000544910 ODR4Q5SWX8 454 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 POTEBQ6S5H4 581 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 CEP128Q6ZU80 1094 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 CCDC25Q86WR0 208 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 A0A087X0B3 334 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 GRID2IPA4D2P6 1211 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 PALM3A6NDB9 673 aaPredicted RBP6.31□□□□□ -1.4
VPS50-220ENST00000544910 USP17L15C9J2P7 530 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 USP17L13C9JLJ4 530 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 USP17L11C9JVI0 530 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 USP17L18D6R9N7 530 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 USP17L22D6RA61 530 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 USP17L17D6RBQ6 530 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 USP17L19D6RCP7 530 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 USP17L20D6RJB6 530 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 BUB1BO60566 1050 aaPredicted RBP6.31□□□□□ -1.4
VPS50-220ENST00000544910 PALMO75781 387 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 ERVK-24P63145 666 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 USP17L24Q0WX57 530 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 CTTNQ14247 550 aaKnown RBP6.31□□□□□ -1.4
VPS50-220ENST00000544910 PTPROQ16827 1216 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 CEP85LQ5SZL2 805 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 ALS2CLQ60I27 953 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 USP17L6PQ6QN14 398 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 SFR1Q86XK3 245 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 CACNA2D3Q8IZS8 1091 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 VTI1AQ96AJ9 217 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 ACCSQ96QU6 501 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 OSBPL9Q96SU4 736 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 DNAJC7Q99615 494 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 CHP1Q99653 195 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 IRX2Q9BZI1 471 aaPredicted RBP6.31□□□□□ -1.4
VPS50-220ENST00000544910 TMOD4Q9NZQ9 345 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 STAT3P40763 770 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 PDE6CP51160 858 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 ZNF543Q08ER8 600 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 BIRC3Q13489 604 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 CC2D2BQ6DHV5 1058 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 CPXCR1Q8N123 301 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 HINFPQ9BQA5 517 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 SYNCQ9H7C4 482 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 PARVGQ9HBI0 331 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 EPB41L5Q9HCM4 733 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 FAM205AQ6ZU69 1335 aa6.31□□□□□ -1.4
VPS50-220ENST00000544910 ESYT2A0FGR8 921 aa6.3□□□□□ -1.4
VPS50-220ENST00000544910 KLK7P49862 253 aa6.3□□□□□ -1.4
VPS50-220ENST00000544910 TSNAXIP1Q2TAA8 658 aa6.3□□□□□ -1.4
VPS50-220ENST00000544910 QRICH1Q2TAL8 776 aa6.3□□□□□ -1.4
VPS50-220ENST00000544910 CCDC38Q502W7 563 aa6.3□□□□□ -1.4
VPS50-220ENST00000544910 DENND2CQ68D51 928 aa6.3□□□□□ -1.4
VPS50-220ENST00000544910 MAIP1Q8WWC4 291 aa6.3□□□□□ -1.4
VPS50-220ENST00000544910 RTFDC1Q9BY42 306 aaPredicted RBP6.3□□□□□ -1.4
VPS50-220ENST00000544910 TMEM206Q9H813 350 aa6.3□□□□□ -1.4
VPS50-220ENST00000544910 FEZ2Q9UHY8 353 aaPredicted RBP6.3□□□□□ -1.4
VPS50-220ENST00000544910 MYMKA6NI61 221 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms